RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 ZSWIM1Q9BR11 485 aa15.57■□□□□ 0.08
LRIF1-202ENST00000485275 MRPL45Q9BRJ2 306 aaKnown RBP15.57■□□□□ 0.08
LRIF1-202ENST00000485275 NENFQ9UMX5 172 aa15.57■□□□□ 0.08
LRIF1-202ENST00000485275 PCDHB4Q9Y5E5 795 aa15.57■□□□□ 0.08
LRIF1-202ENST00000485275 RANBP2P49792 3224 aaKnown RBP15.56■□□□□ 0.08
LRIF1-202ENST00000485275 A0A087X0T9 212 aa15.56■□□□□ 0.08
LRIF1-202ENST00000485275 SSU72P8A0A1W2PR75 194 aa15.56■□□□□ 0.08
LRIF1-202ENST00000485275 KPNA7A9QM74 516 aa15.56■□□□□ 0.08
LRIF1-202ENST00000485275 FAM228BP0C875 321 aa15.56■□□□□ 0.08
LRIF1-202ENST00000485275 CYP11B1P15538 503 aa15.56■□□□□ 0.08
LRIF1-202ENST00000485275 CHRNB2P17787 502 aa15.56■□□□□ 0.08
LRIF1-202ENST00000485275 TAF6P49848 677 aa15.56■□□□□ 0.08
LRIF1-202ENST00000485275 MYO1EQ12965 1108 aa15.56■□□□□ 0.08
LRIF1-202ENST00000485275 SOWAHAQ2M3V2 549 aa15.56■□□□□ 0.08
LRIF1-202ENST00000485275 ZNF394Q53GI3 561 aa15.56■□□□□ 0.08
LRIF1-202ENST00000485275 LIMS2Q7Z4I7 341 aa15.56■□□□□ 0.08
LRIF1-202ENST00000485275 DNAAF5Q86Y56 855 aa15.56■□□□□ 0.08
LRIF1-202ENST00000485275 COLGALT2Q8IYK4 626 aa15.56■□□□□ 0.08
LRIF1-202ENST00000485275 HASPINQ8TF76 798 aa15.56■□□□□ 0.08
LRIF1-202ENST00000485275 ZNF560Q96MR9 790 aa15.56■□□□□ 0.08
LRIF1-202ENST00000485275 IL23AQ9NPF7 189 aa15.56■□□□□ 0.08
LRIF1-202ENST00000485275 GDAP2Q9NXN4 497 aa15.56■□□□□ 0.08
LRIF1-202ENST00000485275 L1RE1Q9UN81 338 aa15.56■□□□□ 0.08
LRIF1-202ENST00000485275 TFR2Q9UP52 801 aa15.56■□□□□ 0.08
LRIF1-202ENST00000485275 ADGRG1Q9Y653 693 aa15.56■□□□□ 0.08
LRIF1-202ENST00000485275 EPN1Q9Y6I3 576 aaPredicted RBP15.56■□□□□ 0.08
LRIF1-202ENST00000485275 FAM170AA1A519 330 aa15.55■□□□□ 0.08
LRIF1-202ENST00000485275 DDX3XO00571 662 aaKnown RBP eCLIP15.55■□□□□ 0.081e-29■■■□□ 19.2
LRIF1-202ENST00000485275 CILPO75339 1184 aa15.55■□□□□ 0.08
LRIF1-202ENST00000485275 UPP2O95045 317 aa15.55■□□□□ 0.08
LRIF1-202ENST00000485275 KIF4AO95239 1232 aa15.55■□□□□ 0.08
LRIF1-202ENST00000485275 CFHP08603 1231 aa15.55■□□□□ 0.08
LRIF1-202ENST00000485275 KCNJ6P48051 423 aa15.55■□□□□ 0.08
LRIF1-202ENST00000485275 AARSP49588 968 aaKnown RBP eCLIP15.55■□□□□ 0.08
LRIF1-202ENST00000485275 TNNC1P63316 161 aa15.55■□□□□ 0.08
LRIF1-202ENST00000485275 CYP27A1Q02318 531 aa15.55■□□□□ 0.08
LRIF1-202ENST00000485275 INCA1Q0VD86 236 aa15.55■□□□□ 0.08
LRIF1-202ENST00000485275 OTOP2Q7RTS6 562 aa15.55■□□□□ 0.08
LRIF1-202ENST00000485275 FAXDC2Q96IV6 333 aa15.55■□□□□ 0.08
LRIF1-202ENST00000485275 FAM81BQ96LP2 452 aa15.55■□□□□ 0.08
LRIF1-202ENST00000485275 MMS19Q96T76 1030 aa15.55■□□□□ 0.08
LRIF1-202ENST00000485275 ELOVL4Q9GZR5 314 aa15.55■□□□□ 0.08
LRIF1-202ENST00000485275 RC3H2Q9HBD1 1191 aaKnown RBP15.55■□□□□ 0.08
LRIF1-202ENST00000485275 ADAMTS1Q9UHI8 967 aa15.55■□□□□ 0.08
LRIF1-202ENST00000485275 LRFN2Q9ULH4 789 aa15.55■□□□□ 0.08
LRIF1-202ENST00000485275 ABHD14A-ACY1A0A1B0GW23 586 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 I3L4J1 428 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 LCA5LO95447 670 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 PNPLA4P41247 253 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 SV2CQ496J9 727 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 TAF3Q5VWG9 929 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 FAM43BQ6ZT52 329 aaPredicted RBP15.54■□□□□ 0.08
LRIF1-202ENST00000485275 GLYCTKQ8IVS8 523 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 SLC30A5Q8TAD4 765 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 PCDHB18PQ96TA0 734 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 NRDE2Q9H7Z3 1164 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 ZMYND8Q9ULU4 1186 aaPredicted RBP15.54■□□□□ 0.08
LRIF1-202ENST00000485275 R3HCC1Q9Y3T6 440 aaKnown RBP15.54■□□□□ 0.08
LRIF1-202ENST00000485275 KIAA1671Q9BY89 1806 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 LAMA3Q16787 3333 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 VWA8A3KMH1 1905 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 RCCD1A6NED2 376 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 DGKIO75912 1065 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 ABL1P00519 1130 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 PFKMP08237 780 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 MMEP08473 750 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 RPL9P32969 192 aaKnown RBP15.54■□□□□ 0.08
LRIF1-202ENST00000485275 PBX3P40426 434 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 BRCC3P46736 316 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 RAD23BP54727 409 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 FMO1Q01740 532 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 TIGD5Q53EQ6 642 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 OSTM1Q86WC4 334 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 CCDC170Q8IYT3 715 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 URGCPQ8TCY9 931 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 TFAP2BQ92481 460 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 TOP1MTQ969P6 601 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 CCDC42Q96M95 316 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 CYP3A43Q9HB55 503 aa15.54■□□□□ 0.08
LRIF1-202ENST00000485275 CXXC1Q9P0U4 656 aaPredicted RBP15.54■□□□□ 0.08
LRIF1-202ENST00000485275 TBKBP1A7MCY6 615 aa15.53■□□□□ 0.08
LRIF1-202ENST00000485275 EIF3CLB5ME19 914 aaKnown RBP15.53■□□□□ 0.08
LRIF1-202ENST00000485275 B3GAT3O94766 335 aa15.53■□□□□ 0.08
LRIF1-202ENST00000485275 SSTR3P32745 418 aaPredicted RBP15.53■□□□□ 0.08
LRIF1-202ENST00000485275 NDST1P52848 882 aa15.53■□□□□ 0.08
LRIF1-202ENST00000485275 FPGSQ05932 587 aa15.53■□□□□ 0.08
LRIF1-202ENST00000485275 SLC18A3Q16572 532 aa15.53■□□□□ 0.08
LRIF1-202ENST00000485275 CCDC142Q17RM4 750 aa15.53■□□□□ 0.08
LRIF1-202ENST00000485275 ZNF365Q70YC5 407 aa15.53■□□□□ 0.08
LRIF1-202ENST00000485275 TMEM173Q86WV6 379 aaPredicted RBP15.53■□□□□ 0.08
LRIF1-202ENST00000485275 ABI1Q8IZP0 508 aa15.53■□□□□ 0.08
LRIF1-202ENST00000485275 PDCL2Q8N4E4 241 aa15.53■□□□□ 0.08
LRIF1-202ENST00000485275 SLC4A11Q8NBS3 891 aa15.53■□□□□ 0.08
LRIF1-202ENST00000485275 EIF3CQ99613 913 aaKnown RBP15.53■□□□□ 0.08
LRIF1-202ENST00000485275 AGPAT1Q99943 283 aa15.53■□□□□ 0.08
LRIF1-202ENST00000485275 TRMT1Q9NXH9 659 aaKnown RBP15.53■□□□□ 0.08
LRIF1-202ENST00000485275 TAS2R14Q9NYV8 317 aa15.53■□□□□ 0.08
LRIF1-202ENST00000485275 PRKAG2Q9UGJ0 569 aa15.53■□□□□ 0.08
LRIF1-202ENST00000485275 PPP2R2CQ9Y2T4 447 aa15.53■□□□□ 0.08
LRIF1-202ENST00000485275 BZW2Q9Y6E2 419 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms