RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 TADA2AO75478 443 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 RGS9O75916 674 aaPredicted RBP6.76□□□□□ -1.33
PTCD3-215ENST00000484203 GLP2RO95838 553 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 POMCP01189 267 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 GHRHP01286 108 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 ALBP02768 609 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 PRKCBP05771 671 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 THP07101 528 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 HOXB4P17483 251 aaPredicted RBP6.76□□□□□ -1.33
PTCD3-215ENST00000484203 GJB2P29033 226 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 GTF2F1P35269 517 aaKnown RBP eCLIP6.76□□□□□ -1.33
PTCD3-215ENST00000484203 LONP1P36776 959 aaKnown RBP6.76□□□□□ -1.33
PTCD3-215ENST00000484203 PBX3P40426 434 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 MLH1P40692 756 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 UBA7P41226 1012 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 OR1G1P47890 313 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 GLUD2P49448 558 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 DGKGP49619 791 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 TOB1P50616 345 aaPredicted RBP6.76□□□□□ -1.33
PTCD3-215ENST00000484203 STRN3Q13033 797 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 TUSC3Q13454 348 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 SUZ12Q15022 739 aaKnown RBP6.76□□□□□ -1.33
PTCD3-215ENST00000484203 PTPN14Q15678 1187 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 USP41Q3LFD5 358 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 HYIQ5T013 277 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 C15orf39Q6ZRI6 1047 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 C8orf86Q6ZUL3 223 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 MAEAQ7L5Y9 396 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 OTOP3Q7RTS5 596 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 ZNF280BQ86YH2 543 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 HOMEZQ8IX15 550 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 UBALD2Q8IYN6 164 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 CMASQ8NFW8 434 aaPredicted RBP6.76□□□□□ -1.33
PTCD3-215ENST00000484203 STAMQ92783 540 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 ACSF2Q96CM8 615 aaPredicted RBP6.76□□□□□ -1.33
PTCD3-215ENST00000484203 CALML4Q96GE6 196 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 INTS4Q96HW7 963 aaKnown RBP6.76□□□□□ -1.33
PTCD3-215ENST00000484203 CPB2Q96IY4 423 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 FBXL18Q96ME1 805 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 UROC1Q96N76 676 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 TSPAN18Q96SJ8 248 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 NTPCRQ9BSD7 190 aaKnown RBP6.76□□□□□ -1.33
PTCD3-215ENST00000484203 LRFN3Q9BTN0 628 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 HERC2P3Q9BVR0 1158 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 CCDC94Q9BW85 323 aaPredicted RBP6.76□□□□□ -1.33
PTCD3-215ENST00000484203 EIF2AQ9BY44 585 aaKnown RBP6.76□□□□□ -1.33
PTCD3-215ENST00000484203 MRPL4Q9BYD3 311 aaKnown RBP6.76□□□□□ -1.33
PTCD3-215ENST00000484203 PLEKHA4Q9H4M7 779 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 EPHX3Q9H6B9 360 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 SFXN1Q9H9B4 322 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 GPRC5CQ9NQ84 441 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 CNTN3Q9P232 1028 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 FNIP2Q9P278 1114 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 LARSQ9P2J5 1176 aaKnown RBP6.76□□□□□ -1.33
PTCD3-215ENST00000484203 NAGPAQ9UK23 515 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 TNFSF13BQ9Y275 285 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 PCDHB6Q9Y5E3 794 aa6.76□□□□□ -1.33
PTCD3-215ENST00000484203 CCDC169A6NNP5 214 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 NT5C1B-RDH14C9J2C7 533 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 B4GALT5O43286 388 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 DTNBO60941 627 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 DDHD2O94830 711 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 NPTXRO95502 500 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 GLUD1P00367 558 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 MCF2P10911 925 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 PLS3P13797 630 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 PAX3P23760 479 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 SCNN1GP51170 649 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 DSG1Q02413 1049 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 HYAL2Q12891 473 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 HSP90AA2PQ14568 343 aaPredicted RBP6.75□□□□□ -1.33
PTCD3-215ENST00000484203 LONRF3Q496Y0 759 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 PERM1Q5SV97 790 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 ATF7IP2Q5U623 682 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 LLGL2Q6P1M3 1020 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 SYCE2Q6PIF2 218 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 BMP8AQ7Z5Y6 402 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 C1orf127Q8N9H9 656 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 VN1R2Q8NFZ6 395 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 RASSF8Q8NHQ8 419 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 EDAQ92838 391 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 KCNN1Q92952 543 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 RPGRIP1Q96KN7 1286 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 SPACA7Q96KW9 195 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 TCHPQ9BT92 498 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 CCDC113Q9H0I3 377 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 IRF2BPLQ9H1B7 796 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 RBSNQ9H1K0 784 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 NXF3Q9H4D5 531 aaKnown RBP6.75□□□□□ -1.33
PTCD3-215ENST00000484203 PDZD7Q9H5P4 517 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 RXFP1Q9HBX9 757 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 CD320Q9NPF0 282 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 KMT5AQ9NQR1 393 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 CHST7Q9NS84 486 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 ZDHHC7Q9NXF8 308 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 DNAJB4Q9UDY4 337 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 ADAM28Q9UKQ2 775 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 ODF2LQ9ULJ1 636 aa6.75□□□□□ -1.33
PTCD3-215ENST00000484203 PRG3Q9Y2Y8 225 aaPredicted RBP6.75□□□□□ -1.33
PTCD3-215ENST00000484203 PCDHGC5Q9Y5F6 944 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms