RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 CCDC163A0A0D9SF12 145 aa11.89□□□□□ -0.51
SMARCC1-205ENST00000483847 ARHGEF35A5YM69 484 aa11.89□□□□□ -0.51
SMARCC1-205ENST00000483847 C4orf47A7E2U8 309 aa11.89□□□□□ -0.51
SMARCC1-205ENST00000483847 DCLK1O15075 740 aa11.89□□□□□ -0.51
SMARCC1-205ENST00000483847 SOAT2O75908 522 aa11.89□□□□□ -0.51
SMARCC1-205ENST00000483847 CDKL5O76039 1030 aa11.89□□□□□ -0.51
SMARCC1-205ENST00000483847 FDPSP14324 419 aaKnown RBP11.89□□□□□ -0.51
SMARCC1-205ENST00000483847 RPL9P32969 192 aaKnown RBP11.89□□□□□ -0.51
SMARCC1-205ENST00000483847 DUSP4Q13115 394 aa11.89□□□□□ -0.51
SMARCC1-205ENST00000483847 PPP2R5AQ15172 486 aa11.89□□□□□ -0.51
SMARCC1-205ENST00000483847 PLK5Q496M5 336 aa11.89□□□□□ -0.51
SMARCC1-205ENST00000483847 FSTL4Q6MZW2 842 aa11.89□□□□□ -0.51
SMARCC1-205ENST00000483847 TTC9BQ8N6N2 239 aa11.89□□□□□ -0.51
SMARCC1-205ENST00000483847 APPL2Q8NEU8 664 aa11.89□□□□□ -0.51
SMARCC1-205ENST00000483847 TMEM209Q96SK2 561 aa11.89□□□□□ -0.51
SMARCC1-205ENST00000483847 ACO2Q99798 780 aaKnown RBP11.89□□□□□ -0.51
SMARCC1-205ENST00000483847 ADAM33Q9BZ11 813 aa11.89□□□□□ -0.51
SMARCC1-205ENST00000483847 SMG9Q9H0W8 520 aaKnown RBP11.89□□□□□ -0.51
SMARCC1-205ENST00000483847 DUSP15Q9H1R2 295 aaPredicted RBP11.89□□□□□ -0.51
SMARCC1-205ENST00000483847 CNTN3Q9P232 1028 aa11.89□□□□□ -0.51
SMARCC1-205ENST00000483847 TUBGCP4Q9UGJ1 667 aa11.89□□□□□ -0.51
SMARCC1-205ENST00000483847 PCDHB8Q9UN66 801 aa11.89□□□□□ -0.51
SMARCC1-205ENST00000483847 SLC27A5Q9Y2P5 690 aa11.89□□□□□ -0.51
SMARCC1-205ENST00000483847 OTOL1A6NHN0 477 aaPredicted RBP11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 SRRM3A6NNA2 597 aaPredicted RBP11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 BTBD18B2RXH4 712 aa11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 K7ERI5 159 aa11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 DPYSL4O14531 572 aa11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 ABLIM1O14639 778 aa11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 AKAP3O75969 853 aa11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 GABRR2P28476 465 aa11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 EPHB3P54753 998 aa11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 ITPRIPL2Q3MIP1 535 aa11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 SEZ6Q53EL9 994 aa11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 TMEM196Q5HYL7 178 aa11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 GPR158Q5T848 1215 aa11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 TAS1R3Q7RTX0 852 aa11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 HAUS6Q7Z4H7 955 aa11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 APBB1IPQ7Z5R6 666 aaPredicted RBP11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 DNAJB7Q7Z6W7 309 aaPredicted RBP11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 GATA6Q92908 595 aa11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 IFT74Q96LB3 600 aa11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 ACAP3Q96P50 834 aa11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 HHIPQ96QV1 700 aa11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 POLR3CQ9BUI4 534 aaPredicted RBP11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 TARS2Q9BW92 718 aaKnown RBP11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 ATXN3LQ9H3M9 355 aa11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 FBRSL1Q9HCM7 1045 aaKnown RBP11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 PDRG1Q9NUG6 133 aa11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 ORC3Q9UBD5 711 aaPredicted RBP11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 SLC8A2Q9UPR5 921 aa11.88□□□□□ -0.51
SMARCC1-205ENST00000483847 LNP1A1A4G5 178 aa11.87□□□□□ -0.51
SMARCC1-205ENST00000483847 M0QZQ0 153 aa11.87□□□□□ -0.51
SMARCC1-205ENST00000483847 OAZ2O95190 189 aa11.87□□□□□ -0.51
SMARCC1-205ENST00000483847 EGFP01133 1207 aa11.87□□□□□ -0.51
SMARCC1-205ENST00000483847 HARSP12081 509 aaKnown RBP11.87□□□□□ -0.51
SMARCC1-205ENST00000483847 MARCKSP29966 332 aaPredicted RBP11.87□□□□□ -0.51
SMARCC1-205ENST00000483847 CDR1P51861 262 aa11.87□□□□□ -0.51
SMARCC1-205ENST00000483847 FOSBP53539 338 aa11.87□□□□□ -0.51
SMARCC1-205ENST00000483847 CYP4F8P98187 520 aa11.87□□□□□ -0.51
SMARCC1-205ENST00000483847 CREB5Q02930 508 aa11.87□□□□□ -0.51
SMARCC1-205ENST00000483847 YWHAHQ04917 246 aaPredicted RBP11.87□□□□□ -0.51
SMARCC1-205ENST00000483847 SPAG1Q07617 926 aa11.87□□□□□ -0.51
SMARCC1-205ENST00000483847 PLD1Q13393 1074 aa11.87□□□□□ -0.51
SMARCC1-205ENST00000483847 ECM1Q16610 540 aa11.87□□□□□ -0.51
SMARCC1-205ENST00000483847 SLC10A6Q3KNW5 377 aa11.87□□□□□ -0.51
SMARCC1-205ENST00000483847 SH3PXD2AQ5TCZ1 1133 aa11.87□□□□□ -0.51
SMARCC1-205ENST00000483847 NAIF1Q69YI7 327 aaPredicted RBP11.87□□□□□ -0.51
SMARCC1-205ENST00000483847 CENPPQ6IPU0 288 aa11.87□□□□□ -0.51
SMARCC1-205ENST00000483847 ATAD1Q8NBU5 361 aa11.87□□□□□ -0.51
SMARCC1-205ENST00000483847 BPIFB1Q8TDL5 484 aa11.87□□□□□ -0.51
SMARCC1-205ENST00000483847 ZBTB45Q96K62 511 aaPredicted RBP11.87□□□□□ -0.51
SMARCC1-205ENST00000483847 HPS4Q9NQG7 708 aa11.87□□□□□ -0.51
SMARCC1-205ENST00000483847 GKN1Q9NS71 199 aa11.87□□□□□ -0.51
SMARCC1-205ENST00000483847 OBP2AQ9NY56 170 aa11.87□□□□□ -0.51
SMARCC1-205ENST00000483847 TPCN1Q9ULQ1 816 aa11.87□□□□□ -0.51
SMARCC1-205ENST00000483847 PHLPP2Q6ZVD8 1323 aa11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 CCDC169A6NNP5 214 aa11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 PFKFB2O60825 505 aa11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 RNF40O75150 1001 aa11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 REC8O95072 547 aa11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 CAVIN2O95810 425 aa11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 MCF2P10911 925 aa11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 PROZP22891 400 aa11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 RPA1P27694 616 aa11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 MCM7P33993 719 aa11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 ALDH1A3P47895 512 aa11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 NPTX2P47972 431 aa11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 PEX3P56589 373 aa11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 PLCB2Q00722 1185 aa11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 RING1Q06587 406 aa11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 GPR17Q13304 367 aa11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 TRIM68Q6AZZ1 485 aa11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 DIS3L2Q8IYB7 885 aaKnown RBP11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 DAW1Q8N136 415 aa11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 KIFAP3Q92845 792 aa11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 PSMG2Q969U7 264 aa11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 LPIN3Q9BQK8 851 aa11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 FAM83CQ9BQN1 747 aa11.86□□□□□ -0.51
SMARCC1-205ENST00000483847 TCHPQ9BT92 498 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms