RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 SPECC1L-ADORA2AF8WAN1 911 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 AXIN1O15169 862 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 TOM1L1O75674 476 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 OAZ2O95190 189 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 CTHP32929 405 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 ALDH1A3P47895 512 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 NEK4P51957 841 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 EPHB3P54753 998 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 YWHAHQ04917 246 aaPredicted RBP8.05□□□□□ -1.12
CSDE1-206ENST00000483030 FCHO2Q0JRZ9 810 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 ST3GAL1Q11201 340 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 MAPK7Q13164 816 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 ORC2Q13416 577 aaPredicted RBP8.05□□□□□ -1.12
CSDE1-206ENST00000483030 PDIA5Q14554 519 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 PON2Q15165 354 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 DGKKQ5KSL6 1271 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 IL31Q6EBC2 164 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 RINT1Q6NUQ1 792 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 C1orf228Q6PIY5 440 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 C1orf186Q6ZWK4 172 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 DNAJB7Q7Z6W7 309 aaPredicted RBP8.05□□□□□ -1.12
CSDE1-206ENST00000483030 USP37Q86T82 979 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 RALGPS2Q86X27 583 aaPredicted RBP8.05□□□□□ -1.12
CSDE1-206ENST00000483030 TMC8Q8IU68 726 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 ATAD1Q8NBU5 361 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 SNX29Q8TEQ0 813 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 MSANTD3Q96H12 275 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 ZFYVE19Q96K21 471 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 C8orf76Q96K31 380 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 DRC1Q96MC2 740 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 RUSC1Q9BVN2 902 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 DNAJC25Q9H1X3 360 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 FOXP1Q9H334 677 aaPredicted RBP8.05□□□□□ -1.12
CSDE1-206ENST00000483030 ATXN3LQ9H3M9 355 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 GTSE1Q9NYZ3 720 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 ANKFY1Q9P2R3 1169 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 VWA8A3KMH1 1905 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 MIA3Q5JRA6 1907 aa8.05□□□□□ -1.12
CSDE1-206ENST00000483030 OR6C75A6NL08 312 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 PP2D1A8MPX8 630 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 M0QZQ0 153 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 DPYSL4O14531 572 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 CLDN3O15551 220 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 EXTL3O43909 919 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 FOXD2O60548 495 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-206ENST00000483030 SOAT2O75908 522 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 PAPSS2O95340 614 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-206ENST00000483030 CXCL8P10145 99 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 CDC25AP30304 524 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 HOXA6P31267 233 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 PXNP49023 591 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-206ENST00000483030 CDR1P51861 262 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 TNK2Q07912 1038 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 RAD51AP2Q09MP3 1159 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 STRN3Q13033 797 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 GPR17Q13304 367 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 PLD1Q13393 1074 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 GNL2Q13823 731 aaKnown RBP8.04□□□□□ -1.12
CSDE1-206ENST00000483030 NOLC1Q14978 699 aaKnown RBP eCLIP8.04□□□□□ -1.12
CSDE1-206ENST00000483030 SF3A2Q15428 464 aaKnown RBP8.04□□□□□ -1.12
CSDE1-206ENST00000483030 CCDC6Q16204 474 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 AASDHQ4L235 1098 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-206ENST00000483030 ARHGAP29Q52LW3 1261 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 GPR158Q5T848 1215 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 KRT79Q5XKE5 535 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 CENPPQ6IPU0 288 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 DSTYKQ6XUX3 929 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 GAREM2Q75VX8 874 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 KCNK18Q7Z418 384 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 HAUS6Q7Z4H7 955 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 WDR5BQ86VZ2 330 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 DDX1Q92499 740 aaKnown RBP8.04□□□□□ -1.12
CSDE1-206ENST00000483030 NTPCRQ9BSD7 190 aaKnown RBP8.04□□□□□ -1.12
CSDE1-206ENST00000483030 MKNK1Q9BUB5 465 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 ARRDC1-AS1Q9H2J1 176 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 PLEKHA5Q9HAU0 1116 aa8.04□□□□□ -1.12
CSDE1-206ENST00000483030 PATJQ8NI35 1801 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 KMT2BQ9UMN6 2715 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-206ENST00000483030 TTC26A0AVF1 554 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 LACTBL1A8MY62 500 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 TM4SF5O14894 197 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 BRD2P25440 801 aaKnown RBP8.03□□□□□ -1.12
CSDE1-206ENST00000483030 GABRR2P28476 465 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 LRPAP1P30533 357 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 MATR3P43243 847 aaKnown RBP eCLIP8.03□□□□□ -1.12
CSDE1-206ENST00000483030 TRAPPC10P48553 1259 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 AARSP49588 968 aaKnown RBP eCLIP8.03□□□□□ -1.12
CSDE1-206ENST00000483030 GUCY2FP51841 1108 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 MCL1Q07820 350 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 CCINQ13939 588 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 ZRSR1Q15695 479 aaKnown RBP8.03□□□□□ -1.12
CSDE1-206ENST00000483030 ZBTB6Q15916 424 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 IL17AQ16552 155 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 N4BP2L1Q5TBK1 243 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-206ENST00000483030 OVOS1Q6IE37 1185 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 ZPBP2Q6X784 338 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 CCDC83Q8IWF9 413 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 SYNPOQ8N3V7 929 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 TTC9BQ8N6N2 239 aa8.03□□□□□ -1.12
CSDE1-206ENST00000483030 IGSF22Q8N9C0 903 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms