RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 FAM186BQ8IYM0 893 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 LRRC52Q8N7C0 313 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 C12orf76Q8N812 135 aaPredicted RBP9.45□□□□□ -0.9
SNX4-205ENST00000482965 TRIML1Q8N9V2 468 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 KREMEN2Q8NCW0 462 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 PLEKHO2Q8TD55 490 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 TMC2Q8TDI7 906 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 PARD3BQ8TEW8 1205 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 HDAC7Q8WUI4 952 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 DHTKD1Q96HY7 919 aaPredicted RBP9.45□□□□□ -0.9
SNX4-205ENST00000482965 NUP62CLQ9H1M0 184 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 PLEKHA4Q9H4M7 779 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 SFXN1Q9H9B4 322 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 SIX4Q9UIU6 781 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 FBXL5Q9UKA1 691 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 DSEQ9UL01 958 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 USP15Q9Y4E8 981 aaPredicted RBP9.45□□□□□ -0.9
SNX4-205ENST00000482965 NCOR1O75376 2440 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 DOCK6Q96HP0 2047 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 TRIM49BA6NDI0 452 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 OR6C75A6NL08 312 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 LRRIQ3A6PVS8 624 aaPredicted RBP9.44□□□□□ -0.9
SNX4-205ENST00000482965 RIOK3O14730 519 aaKnown RBP9.44□□□□□ -0.9
SNX4-205ENST00000482965 TBC1D4O60343 1298 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 HUS1O60921 280 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 AKAP3O75969 853 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 CLSTN1O94985 981 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 OAZ2O95190 189 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 CYP11A1P05108 521 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 EPB41P11171 864 aaKnown RBP9.44□□□□□ -0.9
SNX4-205ENST00000482965 CPB1P15086 417 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 BMP6P22004 513 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 VAMP7P51809 220 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 AP3M2P53677 418 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 ROR1Q01973 937 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 LRRC63Q05C16 580 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 ITIH3Q06033 890 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 TRPC3Q13507 836 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 LIN9Q5TKA1 542 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 WSCD1Q658N2 575 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 ANKRD40Q6AI12 368 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 SLC8B1Q6J4K2 584 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 LILRA6Q6PI73 481 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 TMC5Q6UXY8 1006 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 INTS8Q75QN2 995 aaKnown RBP9.44□□□□□ -0.9
SNX4-205ENST00000482965 THEM5Q8N1Q8 247 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 CXorf38Q8TB03 319 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 ADAMTS19Q8TE59 1207 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 NELFBQ8WX92 580 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 ZNF516Q92618 1163 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 EEF2KMTQ96G04 330 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 BORCS6Q96GS4 357 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 HPDLQ96IR7 371 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 RIPOR3Q96MK2 946 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 MKNK1Q9BUB5 465 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 OXCT2Q9BYC2 517 aaPredicted RBP9.44□□□□□ -0.9
SNX4-205ENST00000482965 GZF1Q9H116 711 aaPredicted RBP9.44□□□□□ -0.9
SNX4-205ENST00000482965 S1PR5Q9H228 398 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 ADAM7Q9H2U9 754 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 FBXW11Q9UKB1 542 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 CTNND2Q9UQB3 1225 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 SNX9Q9Y5X1 595 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 PRUNE2Q8WUY3 3088 aa9.44□□□□□ -0.9
SNX4-205ENST00000482965 REV3LO60673 3130 aa9.43□□□□□ -0.9
SNX4-205ENST00000482965 BICDL2A1A5D9 508 aa9.43□□□□□ -0.9
SNX4-205ENST00000482965 WDR27A2RRH5 827 aa9.43□□□□□ -0.9
SNX4-205ENST00000482965 PPP1R3GB7ZBB8 358 aa9.43□□□□□ -0.9
SNX4-205ENST00000482965 RFPL2O75678 378 aa9.43□□□□□ -0.9
SNX4-205ENST00000482965 ZMYND10O75800 440 aa9.43□□□□□ -0.9
SNX4-205ENST00000482965 C8AP07357 584 aa9.43□□□□□ -0.9
SNX4-205ENST00000482965 WEE2P0C1S8 567 aa9.43□□□□□ -0.9
SNX4-205ENST00000482965 ELF1P32519 619 aa9.43□□□□□ -0.9
SNX4-205ENST00000482965 MTHFRP42898 656 aa9.43□□□□□ -0.9
SNX4-205ENST00000482965 PMS1P54277 932 aaKnown RBP9.43□□□□□ -0.9
SNX4-205ENST00000482965 DLG4P78352 724 aa9.43□□□□□ -0.9
SNX4-205ENST00000482965 CLDN10P78369 228 aa9.43□□□□□ -0.9
SNX4-205ENST00000482965 FKBP3Q00688 224 aaKnown RBP9.43□□□□□ -0.9
SNX4-205ENST00000482965 PAK1Q13153 545 aa9.43□□□□□ -0.9
SNX4-205ENST00000482965 SMAD2Q15796 467 aaKnown RBP9.43□□□□□ -0.9
SNX4-205ENST00000482965 PPM1LQ5SGD2 360 aa9.43□□□□□ -0.9
SNX4-205ENST00000482965 ATAT1Q5SQI0 421 aa9.43□□□□□ -0.9
SNX4-205ENST00000482965 TDRD10Q5VZ19 366 aaKnown RBP9.43□□□□□ -0.9
SNX4-205ENST00000482965 SCARA3Q6AZY7 606 aa9.43□□□□□ -0.9
SNX4-205ENST00000482965 CCDC149Q6ZUS6 474 aa9.43□□□□□ -0.9
SNX4-205ENST00000482965 CMASQ8NFW8 434 aaPredicted RBP9.43□□□□□ -0.9
SNX4-205ENST00000482965 ZNF461Q8TAF7 563 aa9.43□□□□□ -0.9
SNX4-205ENST00000482965 SUSD6Q92537 303 aa9.43□□□□□ -0.9
SNX4-205ENST00000482965 UHRF1Q96T88 793 aaPredicted RBP9.43□□□□□ -0.9
SNX4-205ENST00000482965 PIDD1Q9HB75 910 aa9.43□□□□□ -0.9
SNX4-205ENST00000482965 ZDHHC7Q9NXF8 308 aa9.43□□□□□ -0.9
SNX4-205ENST00000482965 GDAP2Q9NXN4 497 aa9.43□□□□□ -0.9
SNX4-205ENST00000482965 CDH22Q9UJ99 828 aa9.43□□□□□ -0.9
SNX4-205ENST00000482965 EYSQ5T1H1 3165 aa9.43□□□□□ -0.9
SNX4-205ENST00000482965 DENND4AQ7Z401 1863 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 CCDC195A0A1B0GUA6 201 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 PRRG1O14668 218 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 IKBKBO14920 756 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 SLC16A3O15427 465 aaKnown RBP9.42□□□□□ -0.9
SNX4-205ENST00000482965 ABLIM3O94929 683 aa9.42□□□□□ -0.9
SNX4-205ENST00000482965 MBD3O95983 291 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms