RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 HPDLQ96IR7 371 aa22.52■■□□□ 1.2
SEC13-217ENST00000482647 MKNK1Q9BUB5 465 aa22.52■■□□□ 1.2
SEC13-217ENST00000482647 MAN1C1Q9NR34 630 aa22.52■■□□□ 1.2
SEC13-217ENST00000482647 BICDL2A1A5D9 508 aa22.51■■□□□ 1.19
SEC13-217ENST00000482647 MBD3O95983 291 aa22.51■■□□□ 1.19
SEC13-217ENST00000482647 CYP11A1P05108 521 aa22.51■■□□□ 1.19
SEC13-217ENST00000482647 EPB41P11171 864 aaKnown RBP22.51■■□□□ 1.19
SEC13-217ENST00000482647 ITIH3Q06033 890 aa22.51■■□□□ 1.19
SEC13-217ENST00000482647 TRPC3Q13507 836 aa22.51■■□□□ 1.19
SEC13-217ENST00000482647 SCARA3Q6AZY7 606 aa22.51■■□□□ 1.19
SEC13-217ENST00000482647 CES5AQ6NT32 575 aa22.51■■□□□ 1.19
SEC13-217ENST00000482647 KREMEN2Q8NCW0 462 aa22.51■■□□□ 1.19
SEC13-217ENST00000482647 NELFBQ8WX92 580 aa22.51■■□□□ 1.19
SEC13-217ENST00000482647 EEF2KMTQ96G04 330 aa22.51■■□□□ 1.19
SEC13-217ENST00000482647 S1PR5Q9H228 398 aa22.51■■□□□ 1.19
SEC13-217ENST00000482647 ADAM7Q9H2U9 754 aa22.51■■□□□ 1.19
SEC13-217ENST00000482647 SFXN1Q9H9B4 322 aa22.51■■□□□ 1.19
SEC13-217ENST00000482647 GDAP2Q9NXN4 497 aa22.51■■□□□ 1.19
SEC13-217ENST00000482647 ANK1P16157 1881 aa22.5■■□□□ 1.19
SEC13-217ENST00000482647 TRIM49BA6NDI0 452 aa22.5■■□□□ 1.19
SEC13-217ENST00000482647 OR6C75A6NL08 312 aa22.5■■□□□ 1.19
SEC13-217ENST00000482647 MBTPS2O43462 519 aa22.5■■□□□ 1.19
SEC13-217ENST00000482647 HUS1O60921 280 aa22.5■■□□□ 1.19
SEC13-217ENST00000482647 ARPP19P56211 112 aa22.5■■□□□ 1.19
SEC13-217ENST00000482647 DLG4P78352 724 aa22.5■■□□□ 1.19
SEC13-217ENST00000482647 BIRC3Q13489 604 aa22.5■■□□□ 1.19
SEC13-217ENST00000482647 FOXR2Q6PJQ5 311 aa22.5■■□□□ 1.19
SEC13-217ENST00000482647 ZC3H3Q8IXZ2 948 aaKnown RBP22.5■■□□□ 1.19
SEC13-217ENST00000482647 C12orf76Q8N812 135 aaPredicted RBP22.5■■□□□ 1.19
SEC13-217ENST00000482647 ZNF461Q8TAF7 563 aa22.5■■□□□ 1.19
SEC13-217ENST00000482647 APOL5Q9BWW9 433 aa22.5■■□□□ 1.19
SEC13-217ENST00000482647 SLC16A3O15427 465 aaKnown RBP22.49■■□□□ 1.19
SEC13-217ENST00000482647 CST3P01034 146 aaPredicted RBP22.49■■□□□ 1.19
SEC13-217ENST00000482647 PAK1Q13153 545 aa22.49■■□□□ 1.19
SEC13-217ENST00000482647 RARS2Q5T160 578 aaKnown RBP22.49■■□□□ 1.19
SEC13-217ENST00000482647 THEM5Q8N1Q8 247 aa22.49■■□□□ 1.19
SEC13-217ENST00000482647 MLKLQ8NB16 471 aa22.49■■□□□ 1.19
SEC13-217ENST00000482647 FBXW11Q9UKB1 542 aa22.49■■□□□ 1.19
SEC13-217ENST00000482647 CTNND2Q9UQB3 1225 aa22.49■■□□□ 1.19
SEC13-217ENST00000482647 SNX9Q9Y5X1 595 aa22.49■■□□□ 1.19
SEC13-217ENST00000482647 VCANP13611 3396 aa22.49■■□□□ 1.19
SEC13-217ENST00000482647 C4BPAP04003 597 aaKnown RBP22.48■■□□□ 1.19
SEC13-217ENST00000482647 ATICP31939 592 aa22.48■■□□□ 1.19
SEC13-217ENST00000482647 MCCD1P59942 119 aaPredicted RBP22.48■■□□□ 1.19
SEC13-217ENST00000482647 ROR1Q01973 937 aa22.48■■□□□ 1.19
SEC13-217ENST00000482647 SMAD2Q15796 467 aaKnown RBP22.48■■□□□ 1.19
SEC13-217ENST00000482647 LIN9Q5TKA1 542 aa22.48■■□□□ 1.19
SEC13-217ENST00000482647 TDRD10Q5VZ19 366 aaKnown RBP22.48■■□□□ 1.19
SEC13-217ENST00000482647 WSCD1Q658N2 575 aa22.48■■□□□ 1.19
SEC13-217ENST00000482647 TPGS2Q68CL5 300 aa22.48■■□□□ 1.19
SEC13-217ENST00000482647 TTI2Q6NXR4 508 aa22.48■■□□□ 1.19
SEC13-217ENST00000482647 TMC5Q6UXY8 1006 aa22.48■■□□□ 1.19
SEC13-217ENST00000482647 TMEM86AQ8N2M4 240 aa22.48■■□□□ 1.19
SEC13-217ENST00000482647 TOP6BLQ8N6T0 577 aa22.48■■□□□ 1.19
SEC13-217ENST00000482647 CMASQ8NFW8 434 aaPredicted RBP22.48■■□□□ 1.19
SEC13-217ENST00000482647 CEP63Q96MT8 703 aa22.48■■□□□ 1.19
SEC13-217ENST00000482647 USP15Q9Y4E8 981 aaPredicted RBP22.48■■□□□ 1.19
SEC13-217ENST00000482647 STX10O60499 249 aa22.47■■□□□ 1.19
SEC13-217ENST00000482647 ABLIM3O94929 683 aa22.47■■□□□ 1.19
SEC13-217ENST00000482647 IL9P15248 144 aa22.47■■□□□ 1.19
SEC13-217ENST00000482647 NCOA4Q13772 614 aa22.47■■□□□ 1.19
SEC13-217ENST00000482647 ZACNQ401N2 412 aa22.47■■□□□ 1.19
SEC13-217ENST00000482647 ATAT1Q5SQI0 421 aa22.47■■□□□ 1.19
SEC13-217ENST00000482647 C1orf220Q5T0J3 134 aa22.47■■□□□ 1.19
SEC13-217ENST00000482647 RTL10Q7L3V2 364 aa22.47■■□□□ 1.19
SEC13-217ENST00000482647 PDCL2Q8N4E4 241 aa22.47■■□□□ 1.19
SEC13-217ENST00000482647 SUSD6Q92537 303 aa22.47■■□□□ 1.19
SEC13-217ENST00000482647 SYAP1Q96A49 352 aaPredicted RBP22.47■■□□□ 1.19
SEC13-217ENST00000482647 DUSP9Q99956 384 aaKnown RBP22.47■■□□□ 1.19
SEC13-217ENST00000482647 ZDHHC7Q9NXF8 308 aa22.47■■□□□ 1.19
SEC13-217ENST00000482647 MAFFQ9ULX9 164 aa22.47■■□□□ 1.19
SEC13-217ENST00000482647 CCDC195A0A1B0GUA6 201 aa22.46■■□□□ 1.19
SEC13-217ENST00000482647 ZMYND10O75800 440 aa22.46■■□□□ 1.19
SEC13-217ENST00000482647 STAU1O95793 577 aaKnown RBP22.46■■□□□ 1.19
SEC13-217ENST00000482647 TRIM49P0CI25 452 aa22.46■■□□□ 1.19
SEC13-217ENST00000482647 TRIM49CP0CI26 452 aa22.46■■□□□ 1.19
SEC13-217ENST00000482647 CPB1P15086 417 aa22.46■■□□□ 1.19
SEC13-217ENST00000482647 ATF2P15336 505 aa22.46■■□□□ 1.19
SEC13-217ENST00000482647 ELF1P32519 619 aa22.46■■□□□ 1.19
SEC13-217ENST00000482647 GTF2H1P32780 548 aa22.46■■□□□ 1.19
SEC13-217ENST00000482647 STX17P56962 302 aa22.46■■□□□ 1.19
SEC13-217ENST00000482647 MYL6P60660 151 aa22.46■■□□□ 1.19
SEC13-217ENST00000482647 UVSSAQ2YD98 709 aa22.46■■□□□ 1.19
SEC13-217ENST00000482647 CYP26C1Q6V0L0 522 aa22.46■■□□□ 1.19
SEC13-217ENST00000482647 C15orf39Q6ZRI6 1047 aa22.46■■□□□ 1.19
SEC13-217ENST00000482647 CCDC149Q6ZUS6 474 aa22.46■■□□□ 1.19
SEC13-217ENST00000482647 SV2AQ7L0J3 742 aa22.46■■□□□ 1.19
SEC13-217ENST00000482647 DPH6Q7L8W6 267 aa22.46■■□□□ 1.19
SEC13-217ENST00000482647 FILIP1Q7Z7B0 1213 aa22.46■■□□□ 1.19
SEC13-217ENST00000482647 SPATA18Q8TC71 538 aa22.46■■□□□ 1.19
SEC13-217ENST00000482647 RIPOR3Q96MK2 946 aa22.46■■□□□ 1.19
SEC13-217ENST00000482647 NECTIN4Q96NY8 510 aa22.46■■□□□ 1.19
SEC13-217ENST00000482647 ARMCX3Q9UH62 379 aaPredicted RBP22.46■■□□□ 1.19
SEC13-217ENST00000482647 RWDD2AQ9UIY3 292 aa22.46■■□□□ 1.19
SEC13-217ENST00000482647 L1RE1Q9UN81 338 aa22.46■■□□□ 1.19
SEC13-217ENST00000482647 VWA8A3KMH1 1905 aa22.46■■□□□ 1.19
SEC13-217ENST00000482647 WDR27A2RRH5 827 aa22.45■■□□□ 1.18
SEC13-217ENST00000482647 C8AP07357 584 aa22.45■■□□□ 1.18
SEC13-217ENST00000482647 MTHFRP42898 656 aa22.45■■□□□ 1.18
SEC13-217ENST00000482647 GCLMP48507 274 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms