RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 LAIR1Q6GTX8 287 aa11.26□□□□□ -0.61
DDX39B-220ENST00000482195 MPZL3Q6UWV2 235 aa11.26□□□□□ -0.61
DDX39B-220ENST00000482195 CCDC83Q8IWF9 413 aa11.26□□□□□ -0.61
DDX39B-220ENST00000482195 APPL2Q8NEU8 664 aa11.26□□□□□ -0.61
DDX39B-220ENST00000482195 DEPDC1BQ8WUY9 529 aa11.26□□□□□ -0.61
DDX39B-220ENST00000482195 ZSWIM3Q96MP5 696 aa11.26□□□□□ -0.61
DDX39B-220ENST00000482195 ZMAT2Q96NC0 199 aaKnown RBP11.26□□□□□ -0.61
DDX39B-220ENST00000482195 PGLYRP2Q96PD5 576 aa11.26□□□□□ -0.61
DDX39B-220ENST00000482195 IER2Q9BTL4 223 aa11.26□□□□□ -0.61
DDX39B-220ENST00000482195 PLSCR2Q9NRY7 297 aa11.26□□□□□ -0.61
DDX39B-220ENST00000482195 CNTN3Q9P232 1028 aa11.26□□□□□ -0.61
DDX39B-220ENST00000482195 AFF4Q9UHB7 1163 aaKnown RBP11.26□□□□□ -0.61
DDX39B-220ENST00000482195 YIPF1Q9Y548 306 aa11.26□□□□□ -0.61
DDX39B-220ENST00000482195 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.26□□□□□ -0.61
DDX39B-220ENST00000482195 CHD8Q9HCK8 2581 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 GREB1Q4ZG55 1949 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 CNOT1A5YKK6 2376 aaKnown RBP11.25□□□□□ -0.61
DDX39B-220ENST00000482195 SHISA7A6NL88 538 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 HEPACAM2A8MVW5 462 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 E9PMD0 336 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 SLC16A4O15374 487 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 KRT37O76014 449 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 RPL9P32969 192 aaKnown RBP11.25□□□□□ -0.61
DDX39B-220ENST00000482195 SOX9P48436 509 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 RAD51AP2Q09MP3 1159 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 STRN3Q13033 797 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 SIM2Q14190 667 aaPredicted RBP11.25□□□□□ -0.61
DDX39B-220ENST00000482195 LRRC32Q14392 662 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 NOLC1Q14978 699 aaKnown RBP eCLIP11.25□□□□□ -0.611e-323■■■■■ 32.2
DDX39B-220ENST00000482195 SEZ6Q53EL9 994 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 HEATR6Q6AI08 1181 aaKnown RBP11.25□□□□□ -0.61
DDX39B-220ENST00000482195 ALKAL1Q6UXT8 129 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 RNF19BQ6ZMZ0 732 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 LEMD2Q8NC56 503 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 TTC8Q8TAM2 541 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 NELL1Q92832 810 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 BICD1Q96G01 975 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 SUSD3Q96L08 255 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 DRC1Q96MC2 740 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 TBC1D32Q96NH3 1257 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 RUSC1Q9BVN2 902 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 RAB34Q9BZG1 259 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 CEP72Q9P209 647 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 TUBGCP4Q9UGJ1 667 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 DNM3Q9UQ16 869 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 NCANO14594 1321 aa11.25□□□□□ -0.61
DDX39B-220ENST00000482195 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.24□□□□□ -0.61
DDX39B-220ENST00000482195 A0A1W2PRU2 124 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 SLC38A8A6NNN8 435 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 CHURC1-FNTBB4DL54 471 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 MICAL2O94851 1124 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 OR4Q2P0C623 313 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 CXCL8P10145 99 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 TDGF1P13385 188 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 KCNE1P15382 129 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 CXCL12P48061 93 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 FNTBP49356 437 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 GUCA2AQ02747 115 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 YWHAHQ04917 246 aaPredicted RBP11.24□□□□□ -0.61
DDX39B-220ENST00000482195 SPAG1Q07617 926 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 ST3GAL1Q11201 340 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 SRSF5Q13243 272 aaKnown RBP11.24□□□□□ -0.61
DDX39B-220ENST00000482195 PLD1Q13393 1074 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 XKR4Q5GH76 650 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 PPM1JQ5JR12 505 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 KRT79Q5XKE5 535 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 CEP68Q76N32 757 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 TAS1R3Q7RTX0 852 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 USP37Q86T82 979 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 MAP4K3Q8IVH8 894 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 TMEM130Q8N3G9 435 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 CELF5Q8N6W0 485 aaKnown RBP11.24□□□□□ -0.61
DDX39B-220ENST00000482195 FAM184AQ8NB25 1140 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 SHKBP1Q8TBC3 707 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 NETO1Q8TDF5 533 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 ZBTB45Q96K62 511 aaPredicted RBP11.24□□□□□ -0.61
DDX39B-220ENST00000482195 FOXP1Q9H334 677 aaPredicted RBP11.24□□□□□ -0.61
DDX39B-220ENST00000482195 PTPRHQ9HD43 1115 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 RBM12Q9NTZ6 932 aaKnown RBP11.24□□□□□ -0.61
DDX39B-220ENST00000482195 ARHGAP28Q9P2N2 729 aa11.24□□□□□ -0.61
DDX39B-220ENST00000482195 TIMM13Q9Y5L4 95 aaPredicted RBP11.24□□□□□ -0.61
DDX39B-220ENST00000482195 SFI1A8K8P3 1242 aa11.23□□□□□ -0.61
DDX39B-220ENST00000482195 PP2D1A8MPX8 630 aa11.23□□□□□ -0.61
DDX39B-220ENST00000482195 MOSPD3O75425 235 aa11.23□□□□□ -0.61
DDX39B-220ENST00000482195 RETP07949 1114 aa11.23□□□□□ -0.61
DDX39B-220ENST00000482195 EPHB3P54753 998 aa11.23□□□□□ -0.61
DDX39B-220ENST00000482195 DMWDQ09019 674 aa11.23□□□□□ -0.61
DDX39B-220ENST00000482195 MRPL58Q14197 206 aaKnown RBP11.23□□□□□ -0.61
DDX39B-220ENST00000482195 STXBP5Q5T5C0 1151 aa11.23□□□□□ -0.61
DDX39B-220ENST00000482195 DSTYKQ6XUX3 929 aa11.23□□□□□ -0.61
DDX39B-220ENST00000482195 Q6ZS52 159 aa11.23□□□□□ -0.61
DDX39B-220ENST00000482195 MFSD6LQ8IWD5 586 aa11.23□□□□□ -0.61
DDX39B-220ENST00000482195 DAW1Q8N136 415 aa11.23□□□□□ -0.61
DDX39B-220ENST00000482195 CHAMP1Q96JM3 812 aa11.23□□□□□ -0.61
DDX39B-220ENST00000482195 VPS9D1Q9Y2B5 631 aa11.23□□□□□ -0.61
DDX39B-220ENST00000482195 RBM19Q9Y4C8 960 aaKnown RBP11.23□□□□□ -0.61
DDX39B-220ENST00000482195 DENND4CQ5VZ89 1909 aa11.23□□□□□ -0.61
DDX39B-220ENST00000482195 KMT2BQ9UMN6 2715 aaPredicted RBP11.22□□□□□ -0.61
DDX39B-220ENST00000482195 CHRNB1P11230 501 aa11.22□□□□□ -0.61
DDX39B-220ENST00000482195 TGM1P22735 817 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms