RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 HUS1O60921 280 aa17.59■□□□□ 0.41
CCDC78-212ENST00000482152 ABLIM3O94929 683 aa17.59■□□□□ 0.41
CCDC78-212ENST00000482152 HNRNPA1P09651 372 aaKnown RBP eCLIP17.59■□□□□ 0.41
CCDC78-212ENST00000482152 KRT13P13646 458 aa17.59■□□□□ 0.41
CCDC78-212ENST00000482152 ATF2P15336 505 aa17.59■□□□□ 0.41
CCDC78-212ENST00000482152 CCNE1P24864 410 aa17.59■□□□□ 0.41
CCDC78-212ENST00000482152 ATICP31939 592 aa17.59■□□□□ 0.41
CCDC78-212ENST00000482152 LIN9Q5TKA1 542 aa17.59■□□□□ 0.41
CCDC78-212ENST00000482152 GPR149Q86SP6 731 aa17.59■□□□□ 0.41
CCDC78-212ENST00000482152 GLYCTKQ8IVS8 523 aa17.59■□□□□ 0.41
CCDC78-212ENST00000482152 ADHFE1Q8IWW8 467 aa17.59■□□□□ 0.41
CCDC78-212ENST00000482152 SMYD4Q8IYR2 804 aaPredicted RBP17.59■□□□□ 0.41
CCDC78-212ENST00000482152 TMEM86AQ8N2M4 240 aa17.59■□□□□ 0.41
CCDC78-212ENST00000482152 OR5B17Q8NGF7 314 aa17.59■□□□□ 0.41
CCDC78-212ENST00000482152 SIX4Q9UIU6 781 aa17.59■□□□□ 0.41
CCDC78-212ENST00000482152 CCDC195A0A1B0GUA6 201 aa17.58■□□□□ 0.4
CCDC78-212ENST00000482152 BICDL2A1A5D9 508 aa17.58■□□□□ 0.4
CCDC78-212ENST00000482152 ZMYND10O75800 440 aa17.58■□□□□ 0.4
CCDC78-212ENST00000482152 STAU1O95793 577 aaKnown RBP17.58■□□□□ 0.4
CCDC78-212ENST00000482152 POU2F2P09086 479 aa17.58■□□□□ 0.4
CCDC78-212ENST00000482152 ELF1P32519 619 aa17.58■□□□□ 0.4
CCDC78-212ENST00000482152 CASP4P49662 377 aa17.58■□□□□ 0.4
CCDC78-212ENST00000482152 VAMP7P51809 220 aa17.58■□□□□ 0.4
CCDC78-212ENST00000482152 SMARCB1Q12824 385 aa17.58■□□□□ 0.4
CCDC78-212ENST00000482152 TRPC3Q13507 836 aa17.58■□□□□ 0.4
CCDC78-212ENST00000482152 CBX2Q14781 532 aaPredicted RBP17.58■□□□□ 0.4
CCDC78-212ENST00000482152 RARS2Q5T160 578 aaKnown RBP17.58■□□□□ 0.4
CCDC78-212ENST00000482152 RSPO2Q6UXX9 243 aaPredicted RBP17.58■□□□□ 0.4
CCDC78-212ENST00000482152 FAM186BQ8IYM0 893 aa17.58■□□□□ 0.4
CCDC78-212ENST00000482152 TOP6BLQ8N6T0 577 aa17.58■□□□□ 0.4
CCDC78-212ENST00000482152 HPDLQ96IR7 371 aa17.58■□□□□ 0.4
CCDC78-212ENST00000482152 UHRF1Q96T88 793 aaPredicted RBP17.58■□□□□ 0.4
CCDC78-212ENST00000482152 PHF7Q9BWX1 381 aaPredicted RBP17.58■□□□□ 0.4
CCDC78-212ENST00000482152 CLSTN2Q9H4D0 955 aa17.58■□□□□ 0.4
CCDC78-212ENST00000482152 AFF4Q9UHB7 1163 aaKnown RBP17.58■□□□□ 0.4
CCDC78-212ENST00000482152 ANK1P16157 1881 aa17.58■□□□□ 0.4
CCDC78-212ENST00000482152 UNC80Q8N2C7 3258 aa17.58■□□□□ 0.4
CCDC78-212ENST00000482152 PTPRJQ12913 1337 aa17.57■□□□□ 0.4
CCDC78-212ENST00000482152 SLC16A3O15427 465 aaKnown RBP17.57■□□□□ 0.4
CCDC78-212ENST00000482152 ADAM12O43184 909 aa17.57■□□□□ 0.4
CCDC78-212ENST00000482152 STX10O60499 249 aa17.57■□□□□ 0.4
CCDC78-212ENST00000482152 PHACTR2O75167 634 aa17.57■□□□□ 0.4
CCDC78-212ENST00000482152 AKAP3O75969 853 aa17.57■□□□□ 0.4
CCDC78-212ENST00000482152 EPB41P11171 864 aaKnown RBP17.57■□□□□ 0.4
CCDC78-212ENST00000482152 IL9P15248 144 aa17.57■□□□□ 0.4
CCDC78-212ENST00000482152 GTF2H1P32780 548 aa17.57■□□□□ 0.4
CCDC78-212ENST00000482152 ROR1Q01973 937 aa17.57■□□□□ 0.4
CCDC78-212ENST00000482152 CAMK4Q16566 473 aa17.57■□□□□ 0.4
CCDC78-212ENST00000482152 LMBRD2Q68DH5 695 aaPredicted RBP17.57■□□□□ 0.4
CCDC78-212ENST00000482152 ANKRD40Q6AI12 368 aa17.57■□□□□ 0.4
CCDC78-212ENST00000482152 ZC3H3Q8IXZ2 948 aaKnown RBP17.57■□□□□ 0.4
CCDC78-212ENST00000482152 ZNF516Q92618 1163 aa17.57■□□□□ 0.4
CCDC78-212ENST00000482152 SYAP1Q96A49 352 aaPredicted RBP17.57■□□□□ 0.4
CCDC78-212ENST00000482152 PRKD2Q9BZL6 878 aa17.57■□□□□ 0.4
CCDC78-212ENST00000482152 GZF1Q9H116 711 aaPredicted RBP17.57■□□□□ 0.4
CCDC78-212ENST00000482152 HSFX1Q9UBD0 423 aa17.57■□□□□ 0.4
CCDC78-212ENST00000482152 TIMM13Q9Y5L4 95 aaPredicted RBP17.57■□□□□ 0.4
CCDC78-212ENST00000482152 LRRIQ3A6PVS8 624 aaPredicted RBP17.56■□□□□ 0.4
CCDC78-212ENST00000482152 XYLBO75191 536 aa17.56■□□□□ 0.4
CCDC78-212ENST00000482152 CST3P01034 146 aaPredicted RBP17.56■□□□□ 0.4
CCDC78-212ENST00000482152 C4BPAP04003 597 aaKnown RBP17.56■□□□□ 0.4
CCDC78-212ENST00000482152 SPATA31D3P0C874 917 aa17.56■□□□□ 0.4
CCDC78-212ENST00000482152 LHX1P48742 406 aa17.56■□□□□ 0.4
CCDC78-212ENST00000482152 BFSP1Q12934 665 aa17.56■□□□□ 0.4
CCDC78-212ENST00000482152 GPR17Q13304 367 aa17.56■□□□□ 0.4
CCDC78-212ENST00000482152 PPM1LQ5SGD2 360 aa17.56■□□□□ 0.4
CCDC78-212ENST00000482152 ISM2Q6H9L7 571 aa17.56■□□□□ 0.4
CCDC78-212ENST00000482152 TMC5Q6UXY8 1006 aa17.56■□□□□ 0.4
CCDC78-212ENST00000482152 SPATA31D4Q6ZUB0 917 aa17.56■□□□□ 0.4
CCDC78-212ENST00000482152 TCEAL8Q8IYN2 117 aa17.56■□□□□ 0.4
CCDC78-212ENST00000482152 TMEM130Q8N3G9 435 aa17.56■□□□□ 0.4
CCDC78-212ENST00000482152 C12orf76Q8N812 135 aaPredicted RBP17.56■□□□□ 0.4
CCDC78-212ENST00000482152 CEP63Q96MT8 703 aa17.56■□□□□ 0.4
CCDC78-212ENST00000482152 VRTNQ9H8Y1 702 aa17.56■□□□□ 0.4
CCDC78-212ENST00000482152 SNX9Q9Y5X1 595 aa17.56■□□□□ 0.4
CCDC78-212ENST00000482152 WDR27A2RRH5 827 aa17.55■□□□□ 0.4
CCDC78-212ENST00000482152 C19orf67A6NJJ6 358 aa17.55■□□□□ 0.4
CCDC78-212ENST00000482152 PPP1R3GB7ZBB8 358 aa17.55■□□□□ 0.4
CCDC78-212ENST00000482152 FGFR1OPO95684 399 aaKnown RBP17.55■□□□□ 0.4
CCDC78-212ENST00000482152 C8AP07357 584 aa17.55■□□□□ 0.4
CCDC78-212ENST00000482152 CPB1P15086 417 aa17.55■□□□□ 0.4
CCDC78-212ENST00000482152 BMP6P22004 513 aa17.55■□□□□ 0.4
CCDC78-212ENST00000482152 ARPP19P56211 112 aa17.55■□□□□ 0.4
CCDC78-212ENST00000482152 SGSM1Q2NKQ1 1148 aa17.55■□□□□ 0.4
CCDC78-212ENST00000482152 ZACNQ401N2 412 aa17.55■□□□□ 0.4
CCDC78-212ENST00000482152 WSCD1Q658N2 575 aa17.55■□□□□ 0.4
CCDC78-212ENST00000482152 LIMS2Q7Z4I7 341 aa17.55■□□□□ 0.4
CCDC78-212ENST00000482152 FILIP1Q7Z7B0 1213 aa17.55■□□□□ 0.4
CCDC78-212ENST00000482152 DCP1BQ8IZD4 617 aaKnown RBP17.55■□□□□ 0.4
CCDC78-212ENST00000482152 PDCL2Q8N4E4 241 aa17.55■□□□□ 0.4
CCDC78-212ENST00000482152 MLKLQ8NB16 471 aa17.55■□□□□ 0.4
CCDC78-212ENST00000482152 PLEKHO2Q8TD55 490 aa17.55■□□□□ 0.4
CCDC78-212ENST00000482152 C2orf15Q8WU43 125 aaKnown RBP17.55■□□□□ 0.4
CCDC78-212ENST00000482152 TAF4BQ92750 862 aa17.55■□□□□ 0.4
CCDC78-212ENST00000482152 ACBD6Q9BR61 282 aa17.55■□□□□ 0.4
CCDC78-212ENST00000482152 APOL5Q9BWW9 433 aa17.55■□□□□ 0.4
CCDC78-212ENST00000482152 COL25A1Q9BXS0 654 aaPredicted RBP17.55■□□□□ 0.4
CCDC78-212ENST00000482152 NUP62CLQ9H1M0 184 aa17.55■□□□□ 0.4
CCDC78-212ENST00000482152 METTL14Q9HCE5 456 aaKnown RBP17.55■□□□□ 0.4
CCDC78-212ENST00000482152 USTQ9Y2C2 406 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms