RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 ZGPATQ8N5A5 531 aaKnown RBP4.72□□□□□ -1.65
COPA-204ENST00000481522 CPEB3Q8NE35 698 aaKnown RBP4.72□□□□□ -1.65
COPA-204ENST00000481522 OR56A1Q8NGH5 318 aa4.72□□□□□ -1.65
COPA-204ENST00000481522 JPH3Q8WXH2 748 aaPredicted RBP4.72□□□□□ -1.65
COPA-204ENST00000481522 MYOCQ99972 504 aa4.72□□□□□ -1.65
COPA-204ENST00000481522 RNPEPQ9H4A4 650 aa4.72□□□□□ -1.65
COPA-204ENST00000481522 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.72□□□□□ -1.65
COPA-204ENST00000481522 SLC23A1Q9UHI7 598 aa4.72□□□□□ -1.65
COPA-204ENST00000481522 PNMA8BQ9ULN7 279 aaPredicted RBP4.72□□□□□ -1.65
COPA-204ENST00000481522 G3BP2Q9UN86 482 aaKnown RBP4.72□□□□□ -1.65
COPA-204ENST00000481522 PCDHA13Q9Y5I0 950 aa4.72□□□□□ -1.65
COPA-204ENST00000481522 CFAP20Q9Y6A4 193 aaKnown RBP4.72□□□□□ -1.65
COPA-204ENST00000481522 FPGT-TNNI3KV9GXZ4 949 aa4.72□□□□□ -1.65
COPA-204ENST00000481522 KDM5CP41229 1560 aa4.72□□□□□ -1.65
COPA-204ENST00000481522 CDK13Q14004 1512 aaKnown RBP4.72□□□□□ -1.65
COPA-204ENST00000481522 PNPLA7Q6ZV29 1317 aa4.72□□□□□ -1.65
COPA-204ENST00000481522 ADAMTS7Q9UKP4 1686 aa4.71□□□□□ -1.66
COPA-204ENST00000481522 GRIN2BQ13224 1484 aa4.71□□□□□ -1.66
COPA-204ENST00000481522 TCRBV7S2A1N4TA0A589 114 aa4.71□□□□□ -1.66
COPA-204ENST00000481522 CDHR4A6H8M9 788 aa4.71□□□□□ -1.66
COPA-204ENST00000481522 ZAR1LA6NP61 321 aa4.71□□□□□ -1.66
COPA-204ENST00000481522 RFPL1O75677 317 aa4.71□□□□□ -1.66
COPA-204ENST00000481522 HAUS5O94927 633 aa4.71□□□□□ -1.66
COPA-204ENST00000481522 NDUFA10O95299 355 aa4.71□□□□□ -1.66
COPA-204ENST00000481522 DDX6P26196 483 aaKnown RBP eCLIP4.71□□□□□ -1.66
COPA-204ENST00000481522 CYP2C19P33261 490 aa4.71□□□□□ -1.66
COPA-204ENST00000481522 PTTG1IPP53801 180 aa4.71□□□□□ -1.66
COPA-204ENST00000481522 CTXN1P60606 82 aa4.71□□□□□ -1.66
COPA-204ENST00000481522 ATP8B2P98198 1209 aa4.71□□□□□ -1.66
COPA-204ENST00000481522 IL10RAQ13651 578 aa4.71□□□□□ -1.66
COPA-204ENST00000481522 KCTD2Q14681 263 aa4.71□□□□□ -1.66
COPA-204ENST00000481522 PPP2R5AQ15172 486 aa4.71□□□□□ -1.66
COPA-204ENST00000481522 NFE2Q16621 373 aaPredicted RBP4.71□□□□□ -1.66
COPA-204ENST00000481522 BEAN1Q3B7T3 259 aa4.71□□□□□ -1.66
COPA-204ENST00000481522 SPDYE7PQ495Y7 208 aa4.71□□□□□ -1.66
COPA-204ENST00000481522 TSHZ3Q63HK5 1081 aa4.71□□□□□ -1.66
COPA-204ENST00000481522 ARMC6Q6NXE6 501 aa4.71□□□□□ -1.66
COPA-204ENST00000481522 RHOUQ7L0Q8 258 aa4.71□□□□□ -1.66
COPA-204ENST00000481522 TTC7BQ86TV6 843 aa4.71□□□□□ -1.66
COPA-204ENST00000481522 RAVER1Q8IY67 606 aaKnown RBP4.71□□□□□ -1.66
COPA-204ENST00000481522 NLGN4YQ8NFZ3 816 aaPredicted RBP4.71□□□□□ -1.66
COPA-204ENST00000481522 KAT5Q92993 513 aa4.71□□□□□ -1.66
COPA-204ENST00000481522 BBC3Q96PG8 261 aaPredicted RBP4.71□□□□□ -1.66
COPA-204ENST00000481522 NEU1Q99519 415 aa4.71□□□□□ -1.66
COPA-204ENST00000481522 MLST8Q9BVC4 326 aa4.71□□□□□ -1.66
COPA-204ENST00000481522 RTFDC1Q9BY42 306 aaPredicted RBP4.71□□□□□ -1.66
COPA-204ENST00000481522 FBXO34Q9NWN3 711 aa4.71□□□□□ -1.66
COPA-204ENST00000481522 SUPT6HQ7KZ85 1726 aaKnown RBP4.71□□□□□ -1.66
COPA-204ENST00000481522 POGZQ7Z3K3 1410 aa4.71□□□□□ -1.66
COPA-204ENST00000481522 PBRM1Q86U86 1689 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 FANCAO15360 1455 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 SPTBN5Q9NRC6 3674 aaKnown RBP4.7□□□□□ -1.66
COPA-204ENST00000481522 POU2F2P09086 479 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 PDCP20941 246 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 CD38P28907 300 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 GUCY1B3Q02153 619 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 TARDBPQ13148 414 aaKnown RBP eCLIP4.7□□□□□ -1.66
COPA-204ENST00000481522 RAB39AQ14964 217 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 DACT2Q5SW24 774 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 THEMIS2Q5TEJ8 643 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 FOXR2Q6PJQ5 311 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 USP45Q70EL2 814 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 CATIPQ7Z7H3 387 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 ADGRG3Q86Y34 549 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 VRK3Q8IV63 474 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 MAPKAPK5Q8IW41 473 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 FITM2Q8N6M3 262 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 FAM122AQ96E09 287 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 CLPTM1LQ96KA5 538 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 PACSIN1Q9BY11 444 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 TEX101Q9BY14 249 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 MAN1C1Q9NR34 630 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 KLHL11Q9NVR0 708 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 FAM30AQ9NZY2 134 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 RNF181Q9P0P0 153 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 KLHL42Q9P2K6 505 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 NOX1Q9Y5S8 564 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 COL16A1Q07092 1604 aaPredicted RBP4.7□□□□□ -1.66
COPA-204ENST00000481522 CHD8Q9HCK8 2581 aa4.7□□□□□ -1.66
COPA-204ENST00000481522 POLR2AP24928 1970 aaKnown RBP4.69□□□□□ -1.66
COPA-204ENST00000481522 CENPVL1A0A0U1RR11 272 aa4.69□□□□□ -1.66
COPA-204ENST00000481522 A0A1B0GTW7 788 aa4.69□□□□□ -1.66
COPA-204ENST00000481522 UNC119BA6NIH7 251 aa4.69□□□□□ -1.66
COPA-204ENST00000481522 TMEM200CA6NKL6 621 aa4.69□□□□□ -1.66
COPA-204ENST00000481522 B3GALT2O43825 422 aa4.69□□□□□ -1.66
COPA-204ENST00000481522 LPXNO60711 386 aa4.69□□□□□ -1.66
COPA-204ENST00000481522 ERN1O75460 977 aaKnown RBP4.69□□□□□ -1.66
COPA-204ENST00000481522 OFD1O75665 1012 aa4.69□□□□□ -1.66
COPA-204ENST00000481522 CDKL5O76039 1030 aa4.69□□□□□ -1.66
COPA-204ENST00000481522 SCGB1D2O95969 90 aa4.69□□□□□ -1.66
COPA-204ENST00000481522 CFIP05156 583 aa4.69□□□□□ -1.66
COPA-204ENST00000481522 CD1AP06126 327 aa4.69□□□□□ -1.66
COPA-204ENST00000481522 U2AF1L5P0DN76 240 aaPredicted RBP4.69□□□□□ -1.66
COPA-204ENST00000481522 MTHFD1P11586 935 aaKnown RBP4.69□□□□□ -1.66
COPA-204ENST00000481522 CDK4P11802 303 aa4.69□□□□□ -1.66
COPA-204ENST00000481522 ZNF37AP17032 561 aaPredicted RBP4.69□□□□□ -1.66
COPA-204ENST00000481522 GCSHP23434 173 aa4.69□□□□□ -1.66
COPA-204ENST00000481522 SLC6A2P23975 617 aa4.69□□□□□ -1.66
COPA-204ENST00000481522 ZFP36P26651 326 aaKnown RBP4.69□□□□□ -1.66
COPA-204ENST00000481522 BMPR1AP36894 532 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms