RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 PLXNA3P51805 1871 aa8.1□□□□□ -1.11
CBX3-206ENST00000481057 ASPMQ8IZT6 3477 aa8.1□□□□□ -1.11
CBX3-206ENST00000481057 FYB1O15117 783 aa8.09□□□□□ -1.11
CBX3-206ENST00000481057 SEC24DO94855 1032 aaPredicted RBP8.09□□□□□ -1.11
CBX3-206ENST00000481057 INHBBP09529 407 aa8.09□□□□□ -1.11
CBX3-206ENST00000481057 CNR2P34972 360 aa8.09□□□□□ -1.11
CBX3-206ENST00000481057 GPR3P46089 330 aa8.09□□□□□ -1.11
CBX3-206ENST00000481057 PIP4K2AP48426 406 aaPredicted RBP8.09□□□□□ -1.11
CBX3-206ENST00000481057 SESN2P58004 480 aaPredicted RBP8.09□□□□□ -1.11
CBX3-206ENST00000481057 INAVAQ3KP66 663 aa8.09□□□□□ -1.11
CBX3-206ENST00000481057 BRDTQ58F21 947 aaPredicted RBP8.09□□□□□ -1.11
CBX3-206ENST00000481057 CCDC178Q5BJE1 867 aa8.09□□□□□ -1.11
CBX3-206ENST00000481057 GAB3Q8WWW8 586 aa8.09□□□□□ -1.11
CBX3-206ENST00000481057 CCDC8Q9H0W5 538 aaPredicted RBP8.09□□□□□ -1.11
CBX3-206ENST00000481057 DEFB129Q9H1M3 183 aa8.09□□□□□ -1.11
CBX3-206ENST00000481057 OR10A2Q9H208 303 aa8.09□□□□□ -1.11
CBX3-206ENST00000481057 ADAM7Q9H2U9 754 aa8.09□□□□□ -1.11
CBX3-206ENST00000481057 CCM2LQ9NUG4 571 aaPredicted RBP8.09□□□□□ -1.11
CBX3-206ENST00000481057 TYW1Q9NV66 732 aaKnown RBP8.09□□□□□ -1.11
CBX3-206ENST00000481057 B4GALT4O60513 344 aa8.08□□□□□ -1.12
CBX3-206ENST00000481057 H2AFYO75367 372 aaKnown RBP8.08□□□□□ -1.12
CBX3-206ENST00000481057 CNOT4O95628 575 aaKnown RBP8.08□□□□□ -1.12
CBX3-206ENST00000481057 CETPP11597 493 aa8.08□□□□□ -1.12
CBX3-206ENST00000481057 LGALS4P56470 323 aa8.08□□□□□ -1.12
CBX3-206ENST00000481057 ADAM15Q13444 863 aa8.08□□□□□ -1.12
CBX3-206ENST00000481057 NFYCQ13952 458 aa8.08□□□□□ -1.12
CBX3-206ENST00000481057 HLFQ16534 295 aa8.08□□□□□ -1.12
CBX3-206ENST00000481057 TBR1Q16650 682 aa8.08□□□□□ -1.12
CBX3-206ENST00000481057 ZNF568Q3ZCX4 644 aa8.08□□□□□ -1.12
CBX3-206ENST00000481057 CCDC129Q6ZRS4 1044 aa8.08□□□□□ -1.12
CBX3-206ENST00000481057 TTC5Q8N0Z6 440 aa8.08□□□□□ -1.12
CBX3-206ENST00000481057 OR14C36Q8NHC7 312 aa8.08□□□□□ -1.12
CBX3-206ENST00000481057 PPP1R14CQ8TAE6 165 aa8.08□□□□□ -1.12
CBX3-206ENST00000481057 GFM2Q969S9 779 aaKnown RBP8.08□□□□□ -1.12
CBX3-206ENST00000481057 RAX2Q96IS3 184 aa8.08□□□□□ -1.12
CBX3-206ENST00000481057 FDXACB1Q9BRP7 624 aaPredicted RBP8.08□□□□□ -1.12
CBX3-206ENST00000481057 ASPSCR1Q9BZE9 553 aa8.08□□□□□ -1.12
CBX3-206ENST00000481057 OSBPL6Q9BZF3 934 aa8.08□□□□□ -1.12
CBX3-206ENST00000481057 SENP6Q9GZR1 1112 aaPredicted RBP8.08□□□□□ -1.12
CBX3-206ENST00000481057 QRSL1Q9H0R6 528 aaKnown RBP8.08□□□□□ -1.12
CBX3-206ENST00000481057 FAM184BQ9ULE4 1060 aa8.08□□□□□ -1.12
CBX3-206ENST00000481057 EDARQ9UNE0 448 aa8.08□□□□□ -1.12
CBX3-206ENST00000481057 CTDP1Q9Y5B0 961 aaPredicted RBP8.08□□□□□ -1.12
CBX3-206ENST00000481057 CDY2AQ9Y6F7 541 aa8.08□□□□□ -1.12
CBX3-206ENST00000481057 DMXL1Q9Y485 3027 aa8.08□□□□□ -1.12
CBX3-206ENST00000481057 MAST2Q6P0Q8 1798 aa8.07□□□□□ -1.12
CBX3-206ENST00000481057 COL1A1P02452 1464 aaPredicted RBP8.07□□□□□ -1.12
CBX3-206ENST00000481057 DDX60Q8IY21 1712 aaKnown RBP8.07□□□□□ -1.12
CBX3-206ENST00000481057 GABRDO14764 452 aa8.07□□□□□ -1.12
CBX3-206ENST00000481057 ARHGAP6O43182 974 aa8.07□□□□□ -1.12
CBX3-206ENST00000481057 NRP2O60462 931 aa8.07□□□□□ -1.12
CBX3-206ENST00000481057 HNRNPLP14866 589 aaKnown RBP eCLIP8.07□□□□□ -1.12
CBX3-206ENST00000481057 EPHB4P54760 987 aa8.07□□□□□ -1.12
CBX3-206ENST00000481057 MRPS9P82933 396 aaKnown RBP8.07□□□□□ -1.12
CBX3-206ENST00000481057 SPIDRQ14159 915 aa8.07□□□□□ -1.12
CBX3-206ENST00000481057 SURF1Q15526 300 aa8.07□□□□□ -1.12
CBX3-206ENST00000481057 RNF151Q2KHN1 245 aa8.07□□□□□ -1.12
CBX3-206ENST00000481057 SUPT20HL1Q3ZLR7 823 aa8.07□□□□□ -1.12
CBX3-206ENST00000481057 ZFYVE27Q5T4F4 411 aa8.07□□□□□ -1.12
CBX3-206ENST00000481057 USP30Q70CQ3 517 aa8.07□□□□□ -1.12
CBX3-206ENST00000481057 GAREM2Q75VX8 874 aa8.07□□□□□ -1.12
CBX3-206ENST00000481057 ADSSL1Q8N142 457 aa8.07□□□□□ -1.12
CBX3-206ENST00000481057 STAG1Q8WVM7 1258 aa8.07□□□□□ -1.12
CBX3-206ENST00000481057 TEPSINQ96N21 525 aa8.07□□□□□ -1.12
CBX3-206ENST00000481057 DDX56Q9NY93 547 aaKnown RBP8.07□□□□□ -1.12
CBX3-206ENST00000481057 POLLQ9UGP5 575 aa8.07□□□□□ -1.12
CBX3-206ENST00000481057 EVLQ9UI08 416 aaPredicted RBP8.07□□□□□ -1.12
CBX3-206ENST00000481057 ZFYVE26Q68DK2 2539 aa8.07□□□□□ -1.12
CBX3-206ENST00000481057 USP9XQ93008 2570 aaPredicted RBP8.07□□□□□ -1.12
CBX3-206ENST00000481057 MGAMO43451 1857 aa8.06□□□□□ -1.12
CBX3-206ENST00000481057 CHD7Q9P2D1 2997 aa8.06□□□□□ -1.12
CBX3-206ENST00000481057 GRXCR1A8MXD5 290 aa8.06□□□□□ -1.12
CBX3-206ENST00000481057 HOXA5P20719 270 aa8.06□□□□□ -1.12
CBX3-206ENST00000481057 SRSF2Q01130 221 aaKnown RBP8.06□□□□□ -1.12
CBX3-206ENST00000481057 PUM1Q14671 1186 aaKnown RBP eCLIP8.06□□□□□ -1.121e-14■□□□□ 10.8
CBX3-206ENST00000481057 ABCB5Q2M3G0 1257 aa8.06□□□□□ -1.12
CBX3-206ENST00000481057 ARHGEF18Q6ZSZ5 1173 aa8.06□□□□□ -1.12
CBX3-206ENST00000481057 TTLL10Q6ZVT0 673 aa8.06□□□□□ -1.12
CBX3-206ENST00000481057 KCNK18Q7Z418 384 aa8.06□□□□□ -1.12
CBX3-206ENST00000481057 CLEC14AQ86T13 490 aa8.06□□□□□ -1.12
CBX3-206ENST00000481057 FERMT3Q86UX7 667 aa8.06□□□□□ -1.12
CBX3-206ENST00000481057 LPPQ93052 612 aa8.06□□□□□ -1.12
CBX3-206ENST00000481057 EYA3Q99504 573 aa8.06□□□□□ -1.12
CBX3-206ENST00000481057 DPP7Q9UHL4 492 aa8.06□□□□□ -1.12
CBX3-206ENST00000481057 PLXNA1Q9UIW2 1896 aa8.06□□□□□ -1.12
CBX3-206ENST00000481057 HEG1Q9ULI3 1381 aa8.06□□□□□ -1.12
CBX3-206ENST00000481057 UBR2Q8IWV8 1755 aa8.05□□□□□ -1.12
CBX3-206ENST00000481057 PRRC2BQ5JSZ5 2229 aaKnown RBP8.05□□□□□ -1.12
CBX3-206ENST00000481057 A0A0G2JLL6 359 aaPredicted RBP8.05□□□□□ -1.12
CBX3-206ENST00000481057 TRIM75PA6NK02 468 aa8.05□□□□□ -1.12
CBX3-206ENST00000481057 LAMTOR5O43504 91 aa8.05□□□□□ -1.12
CBX3-206ENST00000481057 FSBPO95073 299 aa8.05□□□□□ -1.12
CBX3-206ENST00000481057 MT-CO1P00395 513 aa8.05□□□□□ -1.12
CBX3-206ENST00000481057 XPAP23025 273 aaPredicted RBP8.05□□□□□ -1.12
CBX3-206ENST00000481057 PPP2CBP62714 309 aa8.05□□□□□ -1.12
CBX3-206ENST00000481057 PPP2CAP67775 309 aa8.05□□□□□ -1.12
CBX3-206ENST00000481057 EXOSC10Q01780 885 aaKnown RBP8.05□□□□□ -1.12
CBX3-206ENST00000481057 HGFACQ04756 655 aa8.05□□□□□ -1.12
CBX3-206ENST00000481057 MAN2A1Q16706 1144 aa8.05□□□□□ -1.12
CBX3-206ENST00000481057 TOR2AQ5JU69 321 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms