RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 TMEM270Q6UE05 265 aa11.17□□□□□ -0.62
LINC00173-203ENST00000480237 ZNF662Q6ZS27 426 aa11.17□□□□□ -0.62
LINC00173-203ENST00000480237 NOP9Q86U38 636 aaKnown RBP11.17□□□□□ -0.62
LINC00173-203ENST00000480237 SLC47A2Q86VL8 602 aa11.17□□□□□ -0.62
LINC00173-203ENST00000480237 RPUSD2Q8IZ73 545 aaKnown RBP11.17□□□□□ -0.62
LINC00173-203ENST00000480237 USP38Q8NB14 1042 aa11.17□□□□□ -0.62
LINC00173-203ENST00000480237 RBBP8NLQ8NC74 664 aaPredicted RBP11.17□□□□□ -0.62
LINC00173-203ENST00000480237 SMG8Q8ND04 991 aaKnown RBP11.17□□□□□ -0.62
LINC00173-203ENST00000480237 LACRTQ9GZZ8 138 aa11.17□□□□□ -0.62
LINC00173-203ENST00000480237 AGO3Q9H9G7 860 aaKnown RBP11.17□□□□□ -0.62
LINC00173-203ENST00000480237 NXF1Q9UBU9 619 aaKnown RBP11.17□□□□□ -0.62
LINC00173-203ENST00000480237 NAGPAQ9UK23 515 aa11.17□□□□□ -0.62
LINC00173-203ENST00000480237 PADI3Q9ULW8 664 aa11.17□□□□□ -0.62
LINC00173-203ENST00000480237 UBQLN1Q9UMX0 589 aaKnown RBP11.17□□□□□ -0.62
LINC00173-203ENST00000480237 AGAP1Q9UPQ3 857 aa11.17□□□□□ -0.62
LINC00173-203ENST00000480237 PCDHB2Q9Y5E7 798 aa11.17□□□□□ -0.62
LINC00173-203ENST00000480237 ATP8B3O60423 1300 aa11.17□□□□□ -0.62
LINC00173-203ENST00000480237 MACROD2A1Z1Q3 448 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 TMCO5BA8MYB1 307 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 TLR3O15455 904 aaKnown RBP11.16□□□□□ -0.62
LINC00173-203ENST00000480237 PJA2O43164 708 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 ABL1P00519 1130 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 HSPA8P11142 646 aaKnown RBP11.16□□□□□ -0.62
LINC00173-203ENST00000480237 ITGA4P13612 1032 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 CYP11B1P15538 503 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 CD58P19256 250 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 IBSPP21815 317 aaPredicted RBP11.16□□□□□ -0.62
LINC00173-203ENST00000480237 ATICP31939 592 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 RAB27AP51159 221 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 BPIFB4P59827 614 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 TNNC1P63316 161 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 RBP5P82980 135 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 MYO1EQ12965 1108 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 SCARA3Q6AZY7 606 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 FBXO46Q6PJ61 603 aaPredicted RBP11.16□□□□□ -0.62
LINC00173-203ENST00000480237 TMEM130Q8N3G9 435 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 CAGE1Q8TC20 777 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 SECISBP2LQ93073 1101 aaKnown RBP11.16□□□□□ -0.62
LINC00173-203ENST00000480237 HPDLQ96IR7 371 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 ZMAT2Q96NC0 199 aaKnown RBP11.16□□□□□ -0.62
LINC00173-203ENST00000480237 RPS6KC1Q96S38 1066 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 SYT11Q9BT88 431 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 IRX2Q9BZI1 471 aaPredicted RBP11.16□□□□□ -0.62
LINC00173-203ENST00000480237 XYLT2Q9H1B5 865 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 CXCL16Q9H2A7 254 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 KDM4CQ9H3R0 1056 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 MYO1AQ9UBC5 1043 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 TUBGCP4Q9UGJ1 667 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 NOCTQ9UK39 431 aaKnown RBP11.16□□□□□ -0.62
LINC00173-203ENST00000480237 POLIQ9UNA4 740 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 SQORQ9Y6N5 450 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 H2AFZP0C0S5 128 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 GNA15P30679 374 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 CASQ1P31415 396 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 ASPAP45381 313 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 GCGRP47871 477 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 CDR2Q01850 454 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 BFSP2Q13515 415 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 WDR72Q3MJ13 1102 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 H2AFVQ71UI9 128 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 FAM126BQ8IXS8 530 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 SLC35F6Q8N357 371 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 C18orf25Q96B23 403 aaPredicted RBP11.16□□□□□ -0.62
LINC00173-203ENST00000480237 ZNF560Q96MR9 790 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 WDR24Q96S15 920 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 TSPAN18Q96SJ8 248 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 PACSIN1Q9BY11 444 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 ACP6Q9NPH0 428 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 NENFQ9UMX5 172 aa11.16□□□□□ -0.62
LINC00173-203ENST00000480237 SMIM28A0A1B0GU29 152 aa11.15□□□□□ -0.62
LINC00173-203ENST00000480237 PQBP1O60828 265 aaKnown RBP11.15□□□□□ -0.62
LINC00173-203ENST00000480237 CD4P01730 458 aa11.15□□□□□ -0.62
LINC00173-203ENST00000480237 MMEP08473 750 aa11.15□□□□□ -0.62
LINC00173-203ENST00000480237 KCNE1P15382 129 aa11.15□□□□□ -0.62
LINC00173-203ENST00000480237 ACO1P21399 889 aaKnown RBP11.15□□□□□ -0.62
LINC00173-203ENST00000480237 RAP1GAPP47736 663 aa11.15□□□□□ -0.62
LINC00173-203ENST00000480237 NAP1L1P55209 391 aaKnown RBP11.15□□□□□ -0.62
LINC00173-203ENST00000480237 ALKAL1Q6UXT8 129 aa11.15□□□□□ -0.62
LINC00173-203ENST00000480237 LRRC8DQ7L1W4 858 aa11.15□□□□□ -0.62
LINC00173-203ENST00000480237 ZNF677Q86XU0 584 aa11.15□□□□□ -0.62
LINC00173-203ENST00000480237 DNAJC5GQ8N7S2 189 aa11.15□□□□□ -0.62
LINC00173-203ENST00000480237 UBR7Q8N806 425 aa11.15□□□□□ -0.62
LINC00173-203ENST00000480237 RNF169Q8NCN4 708 aa11.15□□□□□ -0.62
LINC00173-203ENST00000480237 SLC30A5Q8TAD4 765 aa11.15□□□□□ -0.62
LINC00173-203ENST00000480237 OLIG1Q8TAK6 271 aa11.15□□□□□ -0.62
LINC00173-203ENST00000480237 LPPQ93052 612 aa11.15□□□□□ -0.62
LINC00173-203ENST00000480237 ALS2CR12Q96Q35 445 aa11.15□□□□□ -0.62
LINC00173-203ENST00000480237 ADAM2Q99965 735 aa11.15□□□□□ -0.62
LINC00173-203ENST00000480237 PRR14Q9BWN1 585 aa11.15□□□□□ -0.62
LINC00173-203ENST00000480237 BCO2Q9BYV7 579 aa11.15□□□□□ -0.62
LINC00173-203ENST00000480237 OSBPL7Q9BZF2 842 aa11.15□□□□□ -0.62
LINC00173-203ENST00000480237 PDCL3Q9H2J4 239 aa11.15□□□□□ -0.62
LINC00173-203ENST00000480237 SMYD3Q9H7B4 428 aa11.15□□□□□ -0.62
LINC00173-203ENST00000480237 VRTNQ9H8Y1 702 aa11.15□□□□□ -0.62
LINC00173-203ENST00000480237 CISHQ9NSE2 258 aa11.15□□□□□ -0.62
LINC00173-203ENST00000480237 PUF60Q9UHX1 559 aaKnown RBP11.15□□□□□ -0.62
LINC00173-203ENST00000480237 PAXBP1Q9Y5B6 917 aa11.15□□□□□ -0.62
LINC00173-203ENST00000480237 NCANO14594 1321 aa11.14□□□□□ -0.63
LINC00173-203ENST00000480237 FAM170AA1A519 330 aa11.14□□□□□ -0.63
LINC00173-203ENST00000480237 THAP12O43422 761 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms