RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 PDZRN4Q6ZMN7 1036 aaPredicted RBP12□□□□□ -0.49
CLDN11-205ENST00000480067 DPH6Q7L8W6 267 aa12□□□□□ -0.49
CLDN11-205ENST00000480067 TMC7Q7Z402 723 aa12□□□□□ -0.49
CLDN11-205ENST00000480067 PPM1KQ8N3J5 372 aa12□□□□□ -0.49
CLDN11-205ENST00000480067 TOP6BLQ8N6T0 577 aa12□□□□□ -0.49
CLDN11-205ENST00000480067 MICAL1Q8TDZ2 1067 aa12□□□□□ -0.49
CLDN11-205ENST00000480067 POF1BQ8WVV4 589 aa12□□□□□ -0.49
CLDN11-205ENST00000480067 TATDN2Q93075 761 aa12□□□□□ -0.49
CLDN11-205ENST00000480067 FAXDC2Q96IV6 333 aa12□□□□□ -0.49
CLDN11-205ENST00000480067 B3GALT6Q96L58 329 aa12□□□□□ -0.49
CLDN11-205ENST00000480067 TRIM5Q9C035 493 aa12□□□□□ -0.49
CLDN11-205ENST00000480067 XPO4Q9C0E2 1151 aaKnown RBP12□□□□□ -0.49
CLDN11-205ENST00000480067 NIF3L1Q9GZT8 377 aa12□□□□□ -0.49
CLDN11-205ENST00000480067 POLIQ9UNA4 740 aa12□□□□□ -0.49
CLDN11-205ENST00000480067 TIMM13Q9Y5L4 95 aaPredicted RBP12□□□□□ -0.49
CLDN11-205ENST00000480067 TMEM265A0A087WTH1 108 aa11.99□□□□□ -0.49
CLDN11-205ENST00000480067 GOLGA6L3A6NEY3 463 aa11.99□□□□□ -0.49
CLDN11-205ENST00000480067 SOX1O00570 391 aaPredicted RBP11.99□□□□□ -0.49
CLDN11-205ENST00000480067 GRM6O15303 877 aa11.99□□□□□ -0.49
CLDN11-205ENST00000480067 EFEMP2O95967 443 aa11.99□□□□□ -0.49
CLDN11-205ENST00000480067 URODP06132 367 aa11.99□□□□□ -0.49
CLDN11-205ENST00000480067 WEE2P0C1S8 567 aa11.99□□□□□ -0.49
CLDN11-205ENST00000480067 TBXAS1P24557 533 aaPredicted RBP11.99□□□□□ -0.49
CLDN11-205ENST00000480067 TKTP29401 623 aaKnown RBP11.99□□□□□ -0.49
CLDN11-205ENST00000480067 CDH8P55286 799 aa11.99□□□□□ -0.49
CLDN11-205ENST00000480067 YWHAHQ04917 246 aaPredicted RBP11.99□□□□□ -0.49
CLDN11-205ENST00000480067 WSCD1Q658N2 575 aa11.99□□□□□ -0.49
CLDN11-205ENST00000480067 PHLDB3Q6NSJ2 640 aa11.99□□□□□ -0.49
CLDN11-205ENST00000480067 SARM1Q6SZW1 724 aa11.99□□□□□ -0.49
CLDN11-205ENST00000480067 SCARA5Q6ZMJ2 495 aa11.99□□□□□ -0.49
CLDN11-205ENST00000480067 RRAGAQ7L523 313 aa11.99□□□□□ -0.49
CLDN11-205ENST00000480067 TMEM86AQ8N2M4 240 aa11.99□□□□□ -0.49
CLDN11-205ENST00000480067 PDCL2Q8N4E4 241 aa11.99□□□□□ -0.49
CLDN11-205ENST00000480067 FAM81BQ96LP2 452 aa11.99□□□□□ -0.49
CLDN11-205ENST00000480067 ERGIC2Q96RQ1 377 aa11.99□□□□□ -0.49
CLDN11-205ENST00000480067 LSM14BQ9BX40 385 aaKnown RBP11.99□□□□□ -0.49
CLDN11-205ENST00000480067 VN1R3Q9BXE9 311 aa11.99□□□□□ -0.49
CLDN11-205ENST00000480067 CYP3A43Q9HB55 503 aa11.99□□□□□ -0.49
CLDN11-205ENST00000480067 UBE2TQ9NPD8 197 aaPredicted RBP11.99□□□□□ -0.49
CLDN11-205ENST00000480067 TLR9Q9NR96 1032 aa11.99□□□□□ -0.49
CLDN11-205ENST00000480067 MRPL17Q9NRX2 175 aaKnown RBP11.99□□□□□ -0.49
CLDN11-205ENST00000480067 CHST7Q9NS84 486 aa11.99□□□□□ -0.49
CLDN11-205ENST00000480067 FAM207AQ9NSI2 230 aaPredicted RBP11.99□□□□□ -0.49
CLDN11-205ENST00000480067 APEX2Q9UBZ4 518 aa11.99□□□□□ -0.49
CLDN11-205ENST00000480067 L1RE1Q9UN81 338 aa11.99□□□□□ -0.49
CLDN11-205ENST00000480067 SSX2IPQ9Y2D8 614 aa11.99□□□□□ -0.49
CLDN11-205ENST00000480067 A0A1W2PQC6 194 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 C2CD2LO14523 706 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 LPXNO60711 386 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 TACC1O75410 805 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 CXCL14O95715 111 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 CYP11A1P05108 521 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 FAM163BP0C2L3 166 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 TYMPP19971 482 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 CA8P35219 290 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 ASPAP45381 313 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 LHX1P48742 406 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 GLUD2P49448 558 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 MFAP3P55082 362 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 GCNT1Q02742 428 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 CUL2Q13617 745 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 RTP2Q5QGT7 225 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 VARS2Q5ST30 1063 aaKnown RBP11.98□□□□□ -0.49
CLDN11-205ENST00000480067 ZNF697Q5TEC3 545 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 OVOS1Q6IE37 1185 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 PDXDC1Q6P996 788 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 ANKS3Q6ZW76 656 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 RNF168Q8IYW5 571 aaPredicted RBP11.98□□□□□ -0.49
CLDN11-205ENST00000480067 ADGRF2Q8IZF7 708 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 THEM5Q8N1Q8 247 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 RIN2Q8WYP3 895 aaPredicted RBP11.98□□□□□ -0.49
CLDN11-205ENST00000480067 LRCH3Q96II8 777 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 TCF25Q9BQ70 676 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 HERC2P3Q9BVR0 1158 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 SNX25Q9H3E2 840 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 SMYD3Q9H7B4 428 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 NGRNQ9NPE2 291 aaKnown RBP11.98□□□□□ -0.49
CLDN11-205ENST00000480067 PLCB1Q9NQ66 1216 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 ENTPD7Q9NQZ7 604 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 SIK3Q9Y2K2 1263 aa11.98□□□□□ -0.49
CLDN11-205ENST00000480067 PDCD11Q14690 1871 aaKnown RBP11.98□□□□□ -0.49
CLDN11-205ENST00000480067 H7C4K7 107 aa11.97□□□□□ -0.49
CLDN11-205ENST00000480067 RFXAPO00287 272 aa11.97□□□□□ -0.49
CLDN11-205ENST00000480067 OAZ2O95190 189 aa11.97□□□□□ -0.49
CLDN11-205ENST00000480067 CSPG5O95196 566 aa11.97□□□□□ -0.49
CLDN11-205ENST00000480067 CTSAP10619 480 aa11.97□□□□□ -0.49
CLDN11-205ENST00000480067 CD58P19256 250 aa11.97□□□□□ -0.49
CLDN11-205ENST00000480067 DNAJB1P25685 340 aa11.97□□□□□ -0.49
CLDN11-205ENST00000480067 GNL1P36915 607 aaPredicted RBP11.97□□□□□ -0.49
CLDN11-205ENST00000480067 KLK7P49862 253 aa11.97□□□□□ -0.49
CLDN11-205ENST00000480067 ERVFC1P60507 584 aa11.97□□□□□ -0.49
CLDN11-205ENST00000480067 YWHAEP62258 255 aaKnown RBP11.97□□□□□ -0.49
CLDN11-205ENST00000480067 APBA1Q02410 837 aa11.97□□□□□ -0.49
CLDN11-205ENST00000480067 DSG1Q02413 1049 aa11.97□□□□□ -0.49
CLDN11-205ENST00000480067 PTPN21Q16825 1174 aa11.97□□□□□ -0.49
CLDN11-205ENST00000480067 PTPROQ16827 1216 aa11.97□□□□□ -0.49
CLDN11-205ENST00000480067 HABP4Q5JVS0 413 aaKnown RBP11.97□□□□□ -0.49
CLDN11-205ENST00000480067 KLHDC7AQ5VTJ3 777 aa11.97□□□□□ -0.49
CLDN11-205ENST00000480067 KIAA0319Q5VV43 1072 aa11.97□□□□□ -0.49
CLDN11-205ENST00000480067 ENOSF1Q7L5Y1 443 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms