RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 SMAD3P84022 425 aaKnown RBP13.44□□□□□ -0.26
TRAPPC12-218ENST00000479897 PLCB3Q01970 1234 aa13.44□□□□□ -0.26
TRAPPC12-218ENST00000479897 APBA1Q02410 837 aa13.44□□□□□ -0.26
TRAPPC12-218ENST00000479897 SPOUT1Q5T280 376 aaKnown RBP13.44□□□□□ -0.26
TRAPPC12-218ENST00000479897 IQCEQ6IPM2 695 aa13.44□□□□□ -0.26
TRAPPC12-218ENST00000479897 GPR65Q8IYL9 337 aa13.44□□□□□ -0.26
TRAPPC12-218ENST00000479897 SHC3Q92529 594 aa13.44□□□□□ -0.26
TRAPPC12-218ENST00000479897 TMEM169Q96HH4 297 aa13.44□□□□□ -0.26
TRAPPC12-218ENST00000479897 KREMEN1Q96MU8 473 aa13.44□□□□□ -0.26
TRAPPC12-218ENST00000479897 SPG21Q9NZD8 308 aa13.44□□□□□ -0.26
TRAPPC12-218ENST00000479897 DNAJC12Q9UKB3 198 aa13.44□□□□□ -0.26
TRAPPC12-218ENST00000479897 DSEQ9UL01 958 aa13.44□□□□□ -0.26
TRAPPC12-218ENST00000479897 PCDHB8Q9UN66 801 aa13.44□□□□□ -0.26
TRAPPC12-218ENST00000479897 L1RE1Q9UN81 338 aa13.44□□□□□ -0.26
TRAPPC12-218ENST00000479897 CNTN6Q9UQ52 1028 aa13.44□□□□□ -0.26
TRAPPC12-218ENST00000479897 YBX2Q9Y2T7 364 aaKnown RBP13.44□□□□□ -0.26
TRAPPC12-218ENST00000479897 SNX9Q9Y5X1 595 aa13.44□□□□□ -0.26
TRAPPC12-218ENST00000479897 FHOD1Q9Y613 1164 aa13.44□□□□□ -0.26
TRAPPC12-218ENST00000479897 COL4A4P53420 1690 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC12-218ENST00000479897 TADA2AO75478 443 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 GYPCP04921 128 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 RB1P06400 928 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 CA3P07451 260 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 FGFR3P22607 806 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 WARSP23381 471 aaKnown RBP13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 BMPR1AP36894 532 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 PBX3P40426 434 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 BRCC3P46736 316 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 JAM2P57087 298 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 LRMPQ12912 555 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 TBX2Q13207 712 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 ARID5BQ14865 1188 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 PTPN21Q16825 1174 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 SOWAHAQ2M3V2 549 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 LRIT3Q3SXY7 679 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 TMC6Q7Z403 805 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 DDX53Q86TM3 631 aaKnown RBP13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 FMNL3Q8IVF7 1028 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 APPL2Q8NEU8 664 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 HASPINQ8TF76 798 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 KBTBD7Q8WVZ9 684 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 BAP1Q92560 729 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 RABGGTAQ92696 567 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 PCMTD1Q96MG8 357 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 ARID3AQ99856 593 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 HERC2P3Q9BVR0 1158 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 STK33Q9BYT3 514 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 SMYD3Q9H7B4 428 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 UBE2TQ9NPD8 197 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 NXF1Q9UBU9 619 aaKnown RBP13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 MSRAQ9UJ68 235 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 AJAP1Q9UKB5 411 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 POLIQ9UNA4 740 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 LZTS1Q9Y250 596 aa13.43□□□□□ -0.26
TRAPPC12-218ENST00000479897 NT5C1B-RDH14C9J2C7 533 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 F8VZ95 297 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 CYB561D2O14569 222 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 GABRDO14764 452 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 CILPO75339 1184 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 ARHGEF15O94989 841 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 SOD2P04179 222 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 MYOGP15173 224 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 ACO1P21399 889 aaKnown RBP13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 CTNNB1P35222 781 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 POLR2FP61218 127 aaKnown RBP13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 ERVK-21P61565 698 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 TAP1Q03518 808 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 UBE3AQ05086 875 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 PRPF38BQ5VTL8 546 aaKnown RBP13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 GJB7Q6PEY0 223 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 DSTYKQ6XUX3 929 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 SCARA5Q6ZMJ2 495 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 RRAGAQ7L523 313 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 ADGRF2Q8IZF7 708 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 PDCL2Q8N4E4 241 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 KAT5Q92993 513 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 ELMO3Q96BJ8 720 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 PDLIM2Q96JY6 352 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 TGS1Q96RS0 853 aaKnown RBP13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 MMS19Q96T76 1030 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 VN1R3Q9BXE9 311 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 GPR62Q9BZJ7 368 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 GPR88Q9GZN0 384 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 SDCBP2Q9H190 292 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 NUCKS1Q9H1E3 243 aaKnown RBP13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 CHST7Q9NS84 486 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 CISHQ9NSE2 258 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 IMPACTQ9P2X3 320 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 BARX2Q9UMQ3 279 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 CAPN11Q9UMQ6 739 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 ATG2AQ2TAZ0 1938 aa13.42□□□□□ -0.26
TRAPPC12-218ENST00000479897 PTPRDP23468 1912 aa13.41□□□□□ -0.26
TRAPPC12-218ENST00000479897 FGF18O76093 207 aa13.41□□□□□ -0.26
TRAPPC12-218ENST00000479897 CLSTN1O94985 981 aa13.41□□□□□ -0.26
TRAPPC12-218ENST00000479897 OAZ2O95190 189 aa13.41□□□□□ -0.26
TRAPPC12-218ENST00000479897 DNAJB2P25686 324 aa13.41□□□□□ -0.26
TRAPPC12-218ENST00000479897 PBX2P40425 430 aa13.41□□□□□ -0.26
TRAPPC12-218ENST00000479897 LHX1P48742 406 aa13.41□□□□□ -0.26
TRAPPC12-218ENST00000479897 ZNF132P52740 706 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms