RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 MRPS17Q9Y2R5 130 aaKnown RBP7.27□□□□□ -1.25
VCP-205ENST00000479300 BACE2Q9Y5Z0 518 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 PIAS3Q9Y6X2 628 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 TRIP11Q15643 1979 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 ITPR1Q14643 2758 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 SDK1Q7Z5N4 2213 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 ACKR2O00590 384 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 VNN2O95498 520 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 CCNE1P24864 410 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 GJB2P29033 226 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 GDI1P31150 447 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 MATR3P43243 847 aaKnown RBP eCLIP7.26□□□□□ -1.25
VCP-205ENST00000479300 CLCNKBP51801 687 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 SMTNP53814 917 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 NRLP54845 237 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 SHC2P98077 582 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 ELAVL2Q12926 359 aaKnown RBP7.26□□□□□ -1.25
VCP-205ENST00000479300 STRN3Q13033 797 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 DMP1Q13316 513 aaPredicted RBP7.26□□□□□ -1.25
VCP-205ENST00000479300 COL9A2Q14055 689 aaPredicted RBP7.26□□□□□ -1.25
VCP-205ENST00000479300 SIM2Q14190 667 aaPredicted RBP7.26□□□□□ -1.25
VCP-205ENST00000479300 UPP1Q16831 310 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 HEATR6Q6AI08 1181 aaKnown RBP7.26□□□□□ -1.25
VCP-205ENST00000479300 SLC8B1Q6J4K2 584 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 PKN3Q6P5Z2 889 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 PDXDC1Q6P996 788 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 KCTD17Q8N5Z5 321 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 FAM160A2Q8N612 972 aaPredicted RBP7.26□□□□□ -1.25
VCP-205ENST00000479300 FAM3CQ92520 227 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 CALML4Q96GE6 196 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 CHAMP1Q96JM3 812 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 LRRC3BQ96PB8 259 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 CORO1BQ9BR76 489 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 TCHPQ9BT92 498 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 TRMT61BQ9BVS5 477 aaKnown RBP7.26□□□□□ -1.25
VCP-205ENST00000479300 TIPINQ9BVW5 301 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 BRD9Q9H8M2 597 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 TRPV5Q9NQA5 729 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 KMT5AQ9NQR1 393 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 CEP72Q9P209 647 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 ANGPTL2Q9UKU9 493 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 GDAQ9Y2T3 454 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 PCDHB6Q9Y5E3 794 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 DSPP15924 2871 aaKnown RBP7.26□□□□□ -1.25
VCP-205ENST00000479300 RALGAPA1Q6GYQ0 2036 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 NBEAQ8NFP9 2946 aa7.26□□□□□ -1.25
VCP-205ENST00000479300 PDCD11Q14690 1871 aaKnown RBP7.26□□□□□ -1.25
VCP-205ENST00000479300 GREB1Q4ZG55 1949 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 H0YCG3 227 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 MAN2B1O00754 1011 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 TRAPPC3O43617 180 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 B3GAT3O94766 335 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 PAPSS2O95340 614 aaPredicted RBP7.25□□□□□ -1.25
VCP-205ENST00000479300 BMP15O95972 392 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 KRT18P05783 430 aaKnown RBP7.25□□□□□ -1.25
VCP-205ENST00000479300 PTPN2P17706 415 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 PSMC3P17980 439 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 PDCP20941 246 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 CXCL12P48061 93 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 CCR3P51677 355 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 EPHA5P54756 1037 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 PEX3P56589 373 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 MRPL58Q14197 206 aaKnown RBP7.25□□□□□ -1.25
VCP-205ENST00000479300 NT5DC1Q5TFE4 455 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 ATF7IP2Q5U623 682 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 LARP1BQ659C4 914 aaKnown RBP7.25□□□□□ -1.25
VCP-205ENST00000479300 RTL10Q7L3V2 364 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 TCEAL8Q8IYN2 117 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 SPEM1Q8N4L4 309 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 CEP120Q8N960 986 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 IGSF22Q8N9C0 903 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 ZNF461Q8TAF7 563 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 SHKBP1Q8TBC3 707 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 SMARCD2Q92925 531 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 TMX3Q96JJ7 454 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 ZMAT2Q96NC0 199 aaKnown RBP7.25□□□□□ -1.25
VCP-205ENST00000479300 KIF2CQ99661 725 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 MKNK1Q9BUB5 465 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 KIFC3Q9BVG8 833 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 LRRC3Q9BY71 257 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 MRPL4Q9BYD3 311 aaKnown RBP7.25□□□□□ -1.25
VCP-205ENST00000479300 SMOC1Q9H4F8 434 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 C17orf75Q9HAS0 396 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 TRPV4Q9HBA0 871 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 ZFP14Q9HCL3 533 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 POLD4Q9HCU8 107 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.25□□□□□ -1.25
VCP-205ENST00000479300 TOPORSQ9NS56 1045 aaPredicted RBP7.25□□□□□ -1.25
VCP-205ENST00000479300 RAB23Q9ULC3 237 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 WASF3Q9UPY6 502 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 INSL5Q9Y5Q6 135 aa7.25□□□□□ -1.25
VCP-205ENST00000479300 WDFY3Q8IZQ1 3526 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 MYH11P35749 1972 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 EML5Q05BV3 1969 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 SMIM28A0A1B0GU29 152 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 VWA3AA6NCI4 1184 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 SLC38A8A6NNN8 435 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 HEPACAM2A8MVW5 462 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 E9PMD0 336 aa7.24□□□□□ -1.25
VCP-205ENST00000479300 SLC26A4O43511 780 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms