RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 GPR88Q9GZN0 384 aa13.5□□□□□ -0.25
HDAC8-217ENST00000478743 CAPN10Q9HC96 672 aa13.5□□□□□ -0.25
HDAC8-217ENST00000478743 AFF4Q9UHB7 1163 aaKnown RBP13.5□□□□□ -0.25
HDAC8-217ENST00000478743 PILRBQ9UKJ0 227 aa13.5□□□□□ -0.25
HDAC8-217ENST00000478743 CCL26Q9Y258 94 aa13.5□□□□□ -0.25
HDAC8-217ENST00000478743 GDAQ9Y2T3 454 aa13.5□□□□□ -0.25
HDAC8-217ENST00000478743 USP9XQ93008 2570 aaPredicted RBP13.5□□□□□ -0.25
HDAC8-217ENST00000478743 ZNF638Q14966 1978 aaKnown RBP13.49□□□□□ -0.25
HDAC8-217ENST00000478743 FAM149AA5PLN7 773 aa13.49□□□□□ -0.25
HDAC8-217ENST00000478743 TRABD2BA6NFA1 517 aa13.49□□□□□ -0.25
HDAC8-217ENST00000478743 ASAP2O43150 1006 aa13.49□□□□□ -0.25
HDAC8-217ENST00000478743 GJB3O75712 270 aa13.49□□□□□ -0.25
HDAC8-217ENST00000478743 MCM5P33992 734 aa13.49□□□□□ -0.25
HDAC8-217ENST00000478743 P2RY2P41231 377 aa13.49□□□□□ -0.25
HDAC8-217ENST00000478743 PLCB2Q00722 1185 aa13.49□□□□□ -0.25
HDAC8-217ENST00000478743 CFHR1Q03591 330 aa13.49□□□□□ -0.25
HDAC8-217ENST00000478743 PSMD2Q13200 908 aa13.49□□□□□ -0.25
HDAC8-217ENST00000478743 CAMK2BQ13554 666 aa13.49□□□□□ -0.25
HDAC8-217ENST00000478743 PCBP1Q15365 356 aaKnown RBP eCLIP13.49□□□□□ -0.25
HDAC8-217ENST00000478743 RTN1Q16799 776 aa13.49□□□□□ -0.25
HDAC8-217ENST00000478743 PFKFB3Q16875 520 aaPredicted RBP13.49□□□□□ -0.25
HDAC8-217ENST00000478743 EEF1DP3Q658K8 133 aa13.49□□□□□ -0.25
HDAC8-217ENST00000478743 SGMS1Q86VZ5 419 aa13.49□□□□□ -0.25
HDAC8-217ENST00000478743 TTC30AQ86WT1 665 aa13.49□□□□□ -0.25
HDAC8-217ENST00000478743 NAXDQ8IW45 347 aa13.49□□□□□ -0.25
HDAC8-217ENST00000478743 TCP11Q8WWU5 503 aa13.49□□□□□ -0.25
HDAC8-217ENST00000478743 TCEANC2Q96MN5 208 aa13.49□□□□□ -0.25
HDAC8-217ENST00000478743 MTA3Q9BTC8 594 aa13.49□□□□□ -0.25
HDAC8-217ENST00000478743 ATXN3LQ9H3M9 355 aa13.49□□□□□ -0.25
HDAC8-217ENST00000478743 OBP2AQ9NY56 170 aa13.49□□□□□ -0.25
HDAC8-217ENST00000478743 VAV3Q9UKW4 847 aa13.49□□□□□ -0.25
HDAC8-217ENST00000478743 CIZ1Q9ULV3 898 aaPredicted RBP13.49□□□□□ -0.25
HDAC8-217ENST00000478743 RBM8AQ9Y5S9 174 aaKnown RBP13.49□□□□□ -0.25
HDAC8-217ENST00000478743 GSPT1P15170 499 aaKnown RBP13.48□□□□□ -0.25
HDAC8-217ENST00000478743 QARSP47897 775 aaKnown RBP13.48□□□□□ -0.25
HDAC8-217ENST00000478743 ATXN3P54252 364 aaPredicted RBP13.48□□□□□ -0.25
HDAC8-217ENST00000478743 SEC13P55735 322 aa13.48□□□□□ -0.25
HDAC8-217ENST00000478743 NCBP1Q09161 790 aaKnown RBP13.48□□□□□ -0.25
HDAC8-217ENST00000478743 Q4G0T1 1027 aa13.48□□□□□ -0.25
HDAC8-217ENST00000478743 CTXN3Q4LDR2 81 aa13.48□□□□□ -0.25
HDAC8-217ENST00000478743 LYSMD4Q5XG99 296 aa13.48□□□□□ -0.25
HDAC8-217ENST00000478743 TPGS2Q68CL5 300 aa13.48□□□□□ -0.25
HDAC8-217ENST00000478743 TMEM92Q6UXU6 159 aa13.48□□□□□ -0.25
HDAC8-217ENST00000478743 LPCAT2Q7L5N7 544 aa13.48□□□□□ -0.25
HDAC8-217ENST00000478743 C11orf74Q86VG3 221 aa13.48□□□□□ -0.25
HDAC8-217ENST00000478743 TMTC2Q8N394 836 aa13.48□□□□□ -0.25
HDAC8-217ENST00000478743 ACDQ96AP0 544 aa13.48□□□□□ -0.25
HDAC8-217ENST00000478743 P2RY13Q9BPV8 354 aa13.48□□□□□ -0.25
HDAC8-217ENST00000478743 SEMA4CQ9C0C4 833 aa13.48□□□□□ -0.25
HDAC8-217ENST00000478743 POLMQ9NP87 494 aaPredicted RBP13.48□□□□□ -0.25
HDAC8-217ENST00000478743 TOR4AQ9NXH8 423 aa13.48□□□□□ -0.25
HDAC8-217ENST00000478743 RGL1Q9NZL6 768 aa13.48□□□□□ -0.25
HDAC8-217ENST00000478743 DNMT3LQ9UJW3 386 aa13.48□□□□□ -0.25
HDAC8-217ENST00000478743 TBX20Q9UMR3 447 aa13.48□□□□□ -0.25
HDAC8-217ENST00000478743 TEX15Q9BXT5 2789 aa13.47□□□□□ -0.25
HDAC8-217ENST00000478743 SLC37A4O43826 429 aa13.47□□□□□ -0.25
HDAC8-217ENST00000478743 CBFA2T3O75081 653 aa13.47□□□□□ -0.25
HDAC8-217ENST00000478743 DRD1P21728 446 aa13.47□□□□□ -0.25
HDAC8-217ENST00000478743 GABRR2P28476 465 aa13.47□□□□□ -0.25
HDAC8-217ENST00000478743 YWHABP31946 246 aaKnown RBP13.47□□□□□ -0.25
HDAC8-217ENST00000478743 GJA4P35212 333 aa13.47□□□□□ -0.25
HDAC8-217ENST00000478743 CDR1P51861 262 aa13.47□□□□□ -0.25
HDAC8-217ENST00000478743 XKR9Q5GH70 373 aa13.47□□□□□ -0.25
HDAC8-217ENST00000478743 TMPRSS7Q7RTY8 843 aa13.47□□□□□ -0.25
HDAC8-217ENST00000478743 SFTPA1Q8IWL2 248 aa13.47□□□□□ -0.25
HDAC8-217ENST00000478743 CCDC33Q8N5R6 958 aa13.47□□□□□ -0.25
HDAC8-217ENST00000478743 FCRL3Q96P31 734 aaPredicted RBP13.47□□□□□ -0.25
HDAC8-217ENST00000478743 LXNQ9BS40 222 aa13.47□□□□□ -0.25
HDAC8-217ENST00000478743 C6orf50Q9HD87 102 aa13.47□□□□□ -0.25
HDAC8-217ENST00000478743 DNAAF2Q9NVR5 837 aaKnown RBP13.47□□□□□ -0.25
HDAC8-217ENST00000478743 RBM28Q9NW13 759 aaKnown RBP13.47□□□□□ -0.25
HDAC8-217ENST00000478743 SLC6A14Q9UN76 642 aa13.47□□□□□ -0.25
HDAC8-217ENST00000478743 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.46□□□□□ -0.25
HDAC8-217ENST00000478743 TLX3O43711 291 aaPredicted RBP13.46□□□□□ -0.25
HDAC8-217ENST00000478743 KRT10P13645 584 aa13.46□□□□□ -0.25
HDAC8-217ENST00000478743 CPB1P15086 417 aa13.46□□□□□ -0.25
HDAC8-217ENST00000478743 ARL2P36404 184 aa13.46□□□□□ -0.25
HDAC8-217ENST00000478743 TFDP1Q14186 410 aa13.46□□□□□ -0.25
HDAC8-217ENST00000478743 MXD4Q14582 209 aaPredicted RBP13.46□□□□□ -0.25
HDAC8-217ENST00000478743 BEST2Q8NFU1 509 aa13.46□□□□□ -0.25
HDAC8-217ENST00000478743 TBCKQ8TEA7 893 aa13.46□□□□□ -0.25
HDAC8-217ENST00000478743 USP33Q8TEY7 942 aa13.46□□□□□ -0.25
HDAC8-217ENST00000478743 IL21Q9HBE4 155 aa13.46□□□□□ -0.25
HDAC8-217ENST00000478743 GPRC5CQ9NQ84 441 aa13.46□□□□□ -0.25
HDAC8-217ENST00000478743 GOLGA4Q13439 2230 aaKnown RBP13.45□□□□□ -0.26
HDAC8-217ENST00000478743 COL6A6A6NMZ7 2263 aa13.45□□□□□ -0.26
HDAC8-217ENST00000478743 GOLGA8AA7E2F4 631 aa13.45□□□□□ -0.26
HDAC8-217ENST00000478743 GOLGA8BA8MQT2 603 aa13.45□□□□□ -0.26
HDAC8-217ENST00000478743 PODXLO00592 558 aa13.45□□□□□ -0.26
HDAC8-217ENST00000478743 ARHGAP33O14559 1287 aa13.45□□□□□ -0.26
HDAC8-217ENST00000478743 SERPINF2P08697 491 aa13.45□□□□□ -0.26
HDAC8-217ENST00000478743 CHRM1P11229 460 aaPredicted RBP13.45□□□□□ -0.26
HDAC8-217ENST00000478743 CYP4A11Q02928 519 aa13.45□□□□□ -0.26
HDAC8-217ENST00000478743 GFPT1Q06210 699 aaPredicted RBP13.45□□□□□ -0.26
HDAC8-217ENST00000478743 POU5F1BQ06416 359 aa13.45□□□□□ -0.26
HDAC8-217ENST00000478743 DUSP4Q13115 394 aa13.45□□□□□ -0.26
HDAC8-217ENST00000478743 HDAC1Q13547 482 aaPredicted RBP13.45□□□□□ -0.26
HDAC8-217ENST00000478743 CTTNQ14247 550 aaKnown RBP13.45□□□□□ -0.26
HDAC8-217ENST00000478743 NBR1Q14596 966 aa13.45□□□□□ -0.26
HDAC8-217ENST00000478743 DUOXA1Q1HG43 343 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms