RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 RSPO2Q6UXX9 243 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-215ENST00000478531 INTS8Q75QN2 995 aaKnown RBP7.42□□□□□ -1.22
BRCA1-215ENST00000478531 C12orf76Q8N812 135 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-215ENST00000478531 TRIML1Q8N9V2 468 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 CXorf38Q8TB03 319 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 TMEM174Q8WUU8 243 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 ZNF516Q92618 1163 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 ELMO3Q96BJ8 720 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 DHTKD1Q96HY7 919 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-215ENST00000478531 HPDLQ96IR7 371 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 CLSTN3Q9BQT9 956 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 RXFP1Q9HBX9 757 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.42□□□□□ -1.224e-6■■■■■ 85.3
BRCA1-215ENST00000478531 FNIP2Q9P278 1114 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 CDH22Q9UJ99 828 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 SNX9Q9Y5X1 595 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 MYH10P35580 1976 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 BICDL2A1A5D9 508 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 ARHGEF37A1IGU5 675 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 H7C4K7 107 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 HUS1O60921 280 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 WEE2P0C1S8 567 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 OR4Q2P0C623 313 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 PIK3CAP42336 1068 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 GCLMP48507 274 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 FKBP3Q00688 224 aaKnown RBP7.42□□□□□ -1.22
BRCA1-215ENST00000478531 ROR1Q01973 937 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 KCNC3Q14003 757 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 DPCR1Q3MIW9 517 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 LEXMQ3ZCV2 418 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 CCDC40Q4G0X9 1142 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 WSCD1Q658N2 575 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 TMC5Q6UXY8 1006 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 SCARA5Q6ZMJ2 495 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 METTL23Q86XA0 190 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 LRRC52Q8N7C0 313 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 SMRP1Q8NCR6 262 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 SLC22A17Q8WUG5 538 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 ATXN2LQ8WWM7 1075 aaKnown RBP7.42□□□□□ -1.22
BRCA1-215ENST00000478531 MSLNLQ96KJ4 702 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 ASB2Q96Q27 587 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 MMS19Q96T76 1030 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 DZANK1Q9NVP4 752 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 FBXL5Q9UKA1 691 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 DENND4AQ7Z401 1863 aa7.41□□□□□ -1.22
BRCA1-215ENST00000478531 WDR27A2RRH5 827 aa7.41□□□□□ -1.22
BRCA1-215ENST00000478531 MAPK13O15264 365 aa7.41□□□□□ -1.22
BRCA1-215ENST00000478531 SLC16A3O15427 465 aaKnown RBP7.41□□□□□ -1.22
BRCA1-215ENST00000478531 RFPL2O75678 378 aa7.41□□□□□ -1.22
BRCA1-215ENST00000478531 IL9P15248 144 aa7.41□□□□□ -1.22
BRCA1-215ENST00000478531 TYMPP19971 482 aa7.41□□□□□ -1.22
BRCA1-215ENST00000478531 MYL6P60660 151 aa7.41□□□□□ -1.22
BRCA1-215ENST00000478531 SMAD4Q13485 552 aaKnown RBP7.41□□□□□ -1.22
BRCA1-215ENST00000478531 NCOA4Q13772 614 aa7.41□□□□□ -1.22
BRCA1-215ENST00000478531 ZNF699Q32M78 642 aa7.41□□□□□ -1.22
BRCA1-215ENST00000478531 C1orf220Q5T0J3 134 aa7.41□□□□□ -1.22
BRCA1-215ENST00000478531 CCDC183Q5T5S1 534 aa7.41□□□□□ -1.22
BRCA1-215ENST00000478531 LIN9Q5TKA1 542 aa7.41□□□□□ -1.22
BRCA1-215ENST00000478531 TTI2Q6NXR4 508 aa7.41□□□□□ -1.22
BRCA1-215ENST00000478531 SYCE2Q6PIF2 218 aa7.41□□□□□ -1.22
BRCA1-215ENST00000478531 ELMSAN1Q6PJG2 1045 aa7.41□□□□□ -1.22
BRCA1-215ENST00000478531 GPR65Q8IYL9 337 aa7.41□□□□□ -1.22
BRCA1-215ENST00000478531 PDCL2Q8N4E4 241 aa7.41□□□□□ -1.22
BRCA1-215ENST00000478531 KREMEN2Q8NCW0 462 aa7.41□□□□□ -1.22
BRCA1-215ENST00000478531 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-215ENST00000478531 FEZF2Q8TBJ5 459 aa7.41□□□□□ -1.22
BRCA1-215ENST00000478531 TMC2Q8TDI7 906 aa7.41□□□□□ -1.22
BRCA1-215ENST00000478531 PGLYRP2Q96PD5 576 aa7.41□□□□□ -1.22
BRCA1-215ENST00000478531 DUSP9Q99956 384 aaKnown RBP7.41□□□□□ -1.22
BRCA1-215ENST00000478531 SFXN1Q9H9B4 322 aa7.41□□□□□ -1.22
BRCA1-215ENST00000478531 NXF1Q9UBU9 619 aaKnown RBP7.41□□□□□ -1.22
BRCA1-215ENST00000478531 FBXW11Q9UKB1 542 aa7.41□□□□□ -1.22
BRCA1-215ENST00000478531 DSEQ9UL01 958 aa7.41□□□□□ -1.22
BRCA1-215ENST00000478531 L1RE1Q9UN81 338 aa7.41□□□□□ -1.22
BRCA1-215ENST00000478531 USP15Q9Y4E8 981 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-215ENST00000478531 BACE2Q9Y5Z0 518 aa7.41□□□□□ -1.22
BRCA1-215ENST00000478531 GRXCR2A6NFK2 248 aa7.4□□□□□ -1.22
BRCA1-215ENST00000478531 VNN1O95497 513 aa7.4□□□□□ -1.22
BRCA1-215ENST00000478531 CST3P01034 146 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-215ENST00000478531 SP100P23497 879 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-215ENST00000478531 PAX3P23760 479 aa7.4□□□□□ -1.22
BRCA1-215ENST00000478531 AP3M2P53677 418 aa7.4□□□□□ -1.22
BRCA1-215ENST00000478531 NLRP12P59046 1061 aa7.4□□□□□ -1.22
BRCA1-215ENST00000478531 TNNC1P63316 161 aa7.4□□□□□ -1.22
BRCA1-215ENST00000478531 CLDN10P78369 228 aa7.4□□□□□ -1.22
BRCA1-215ENST00000478531 PPP3CAQ08209 521 aa7.4□□□□□ -1.22
BRCA1-215ENST00000478531 MRPL58Q14197 206 aaKnown RBP7.4□□□□□ -1.22
BRCA1-215ENST00000478531 TPD52L1Q16890 204 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-215ENST00000478531 WDR72Q3MJ13 1102 aa7.4□□□□□ -1.22
BRCA1-215ENST00000478531 SLC39A12Q504Y0 691 aa7.4□□□□□ -1.22
BRCA1-215ENST00000478531 TJAP1Q5JTD0 557 aa7.4□□□□□ -1.22
BRCA1-215ENST00000478531 SLC8B1Q6J4K2 584 aa7.4□□□□□ -1.22
BRCA1-215ENST00000478531 CES5AQ6NT32 575 aa7.4□□□□□ -1.22
BRCA1-215ENST00000478531 CAVIN1Q6NZI2 390 aaKnown RBP7.4□□□□□ -1.22
BRCA1-215ENST00000478531 TMEM184AQ6ZMB5 413 aa7.4□□□□□ -1.22
BRCA1-215ENST00000478531 SV2AQ7L0J3 742 aa7.4□□□□□ -1.22
BRCA1-215ENST00000478531 CREBRFQ8IUR6 639 aa7.4□□□□□ -1.22
BRCA1-215ENST00000478531 ZC3H3Q8IXZ2 948 aaKnown RBP7.4□□□□□ -1.22
BRCA1-215ENST00000478531 ADGRF2Q8IZF7 708 aa7.4□□□□□ -1.22
BRCA1-215ENST00000478531 MLKLQ8NB16 471 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms