RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-222ENST00000478279 DUSP15Q9H1R2 295 aaPredicted RBP11.58□□□□□ -0.56
APTX-222ENST00000478279 DNAJC25Q9H1X3 360 aa11.58□□□□□ -0.56
APTX-222ENST00000478279 CDT1Q9H211 546 aa11.58□□□□□ -0.56
APTX-222ENST00000478279 BRMS1Q9HCU9 246 aa11.58□□□□□ -0.56
APTX-222ENST00000478279 PTPRHQ9HD43 1115 aa11.58□□□□□ -0.56
APTX-222ENST00000478279 TPCN1Q9ULQ1 816 aa11.58□□□□□ -0.56
APTX-222ENST00000478279 PCDHB8Q9UN66 801 aa11.58□□□□□ -0.56
APTX-222ENST00000478279 SLC8A2Q9UPR5 921 aa11.58□□□□□ -0.56
APTX-222ENST00000478279 NUP210Q8TEM1 1887 aaPredicted RBP11.57□□□□□ -0.56
APTX-222ENST00000478279 SETXQ7Z333 2677 aaKnown RBP11.57□□□□□ -0.56
APTX-222ENST00000478279 C4orf47A7E2U8 309 aa11.57□□□□□ -0.56
APTX-222ENST00000478279 WEE1P30291 646 aa11.57□□□□□ -0.56
APTX-222ENST00000478279 ALDH1A3P47895 512 aa11.57□□□□□ -0.56
APTX-222ENST00000478279 CACNB1Q02641 598 aaPredicted RBP11.57□□□□□ -0.56
APTX-222ENST00000478279 TNK2Q07912 1038 aa11.57□□□□□ -0.56
APTX-222ENST00000478279 PTPAQ15257 358 aa11.57□□□□□ -0.56
APTX-222ENST00000478279 ITPRIPL2Q3MIP1 535 aa11.57□□□□□ -0.56
APTX-222ENST00000478279 ZNF568Q3ZCX4 644 aa11.57□□□□□ -0.56
APTX-222ENST00000478279 TMEM196Q5HYL7 178 aa11.57□□□□□ -0.56
APTX-222ENST00000478279 DAB2IPQ5VWQ8 1189 aa11.57□□□□□ -0.56
APTX-222ENST00000478279 GAREM2Q75VX8 874 aa11.57□□□□□ -0.56
APTX-222ENST00000478279 BPIFB1Q8TDL5 484 aa11.57□□□□□ -0.56
APTX-222ENST00000478279 KIFAP3Q92845 792 aa11.57□□□□□ -0.56
APTX-222ENST00000478279 ACAP3Q96P50 834 aa11.57□□□□□ -0.56
APTX-222ENST00000478279 TM6SF1Q9BZW5 370 aa11.57□□□□□ -0.56
APTX-222ENST00000478279 CRISPLD1Q9H336 500 aa11.57□□□□□ -0.56
APTX-222ENST00000478279 ATXN3LQ9H3M9 355 aa11.57□□□□□ -0.56
APTX-222ENST00000478279 POLD4Q9HCU8 107 aa11.57□□□□□ -0.56
APTX-222ENST00000478279 CNTN3Q9P232 1028 aa11.57□□□□□ -0.56
APTX-222ENST00000478279 ASB3Q9Y575 518 aa11.57□□□□□ -0.56
APTX-222ENST00000478279 GCN1Q92616 2671 aaKnown RBP11.56□□□□□ -0.56
APTX-222ENST00000478279 ABCA7Q8IZY2 2146 aa11.56□□□□□ -0.56
APTX-222ENST00000478279 SRRM3A6NNA2 597 aaPredicted RBP11.56□□□□□ -0.56
APTX-222ENST00000478279 SOBPA7XYQ1 873 aa11.56□□□□□ -0.56
APTX-222ENST00000478279 WNT7AO00755 349 aa11.56□□□□□ -0.56
APTX-222ENST00000478279 DTNBO60941 627 aa11.56□□□□□ -0.56
APTX-222ENST00000478279 RHOBTB1O94844 696 aa11.56□□□□□ -0.56
APTX-222ENST00000478279 REC8O95072 547 aa11.56□□□□□ -0.56
APTX-222ENST00000478279 OAZ2O95190 189 aa11.56□□□□□ -0.56
APTX-222ENST00000478279 FGF19O95750 216 aa11.56□□□□□ -0.56
APTX-222ENST00000478279 CAVIN2O95810 425 aa11.56□□□□□ -0.56
APTX-222ENST00000478279 MCF2P10911 925 aa11.56□□□□□ -0.56
APTX-222ENST00000478279 SPINK2P20155 84 aa11.56□□□□□ -0.56
APTX-222ENST00000478279 RPA1P27694 616 aa11.56□□□□□ -0.56
APTX-222ENST00000478279 YWHAHQ04917 246 aaPredicted RBP11.56□□□□□ -0.56
APTX-222ENST00000478279 GRSF1Q12849 480 aaKnown RBP eCLIP11.56□□□□□ -0.56
APTX-222ENST00000478279 GPR17Q13304 367 aa11.56□□□□□ -0.56
APTX-222ENST00000478279 ELF2Q15723 593 aa11.56□□□□□ -0.56
APTX-222ENST00000478279 ARHGAP15Q53QZ3 475 aa11.56□□□□□ -0.56
APTX-222ENST00000478279 GPR158Q5T848 1215 aa11.56□□□□□ -0.56
APTX-222ENST00000478279 SH3PXD2AQ5TCZ1 1133 aa11.56□□□□□ -0.56
APTX-222ENST00000478279 CENPPQ6IPU0 288 aa11.56□□□□□ -0.56
APTX-222ENST00000478279 LRSAM1Q6UWE0 723 aa11.56□□□□□ -0.56
APTX-222ENST00000478279 DNAJB7Q7Z6W7 309 aaPredicted RBP11.56□□□□□ -0.56
APTX-222ENST00000478279 WASF1Q92558 559 aa11.56□□□□□ -0.56
APTX-222ENST00000478279 GATA6Q92908 595 aa11.56□□□□□ -0.56
APTX-222ENST00000478279 PSMG2Q969U7 264 aa11.56□□□□□ -0.56
APTX-222ENST00000478279 PGLYRP2Q96PD5 576 aa11.56□□□□□ -0.56
APTX-222ENST00000478279 MRPL4Q9BYD3 311 aaKnown RBP11.56□□□□□ -0.56
APTX-222ENST00000478279 TMEM60Q9H2L4 133 aa11.56□□□□□ -0.56
APTX-222ENST00000478279 THG1LQ9NWX6 298 aaKnown RBP11.56□□□□□ -0.56
APTX-222ENST00000478279 ORC3Q9UBD5 711 aaPredicted RBP11.56□□□□□ -0.56
APTX-222ENST00000478279 PCNX2A6NKB5 2137 aa11.56□□□□□ -0.56
APTX-222ENST00000478279 NUP205Q92621 2012 aa11.55□□□□□ -0.56
APTX-222ENST00000478279 ASCC3Q8N3C0 2202 aaKnown RBP11.55□□□□□ -0.56
APTX-222ENST00000478279 BCLAF3A2AJT9 711 aaKnown RBP11.55□□□□□ -0.56
APTX-222ENST00000478279 OR6C75A6NL08 312 aa11.55□□□□□ -0.56
APTX-222ENST00000478279 M0QZQ0 153 aa11.55□□□□□ -0.56
APTX-222ENST00000478279 TRDMT1O14717 391 aaKnown RBP11.55□□□□□ -0.56
APTX-222ENST00000478279 PRAMEF12O95522 483 aa11.55□□□□□ -0.56
APTX-222ENST00000478279 TOP3BO95985 862 aaKnown RBP11.55□□□□□ -0.56
APTX-222ENST00000478279 OR4Q2P0C623 313 aa11.55□□□□□ -0.56
APTX-222ENST00000478279 CEACAM1P13688 526 aa11.55□□□□□ -0.56
APTX-222ENST00000478279 CSRP1P21291 193 aaKnown RBP11.55□□□□□ -0.56
APTX-222ENST00000478279 PROZP22891 400 aa11.55□□□□□ -0.56
APTX-222ENST00000478279 GABRR2P28476 465 aa11.55□□□□□ -0.56
APTX-222ENST00000478279 MCM2P49736 904 aa11.55□□□□□ -0.56
APTX-222ENST00000478279 CREB5Q02930 508 aa11.55□□□□□ -0.56
APTX-222ENST00000478279 KARSQ15046 597 aaKnown RBP11.55□□□□□ -0.56
APTX-222ENST00000478279 FSTL4Q6MZW2 842 aa11.55□□□□□ -0.56
APTX-222ENST00000478279 ERMNQ8TAM6 284 aa11.55□□□□□ -0.56
APTX-222ENST00000478279 TCHPQ9BT92 498 aa11.55□□□□□ -0.56
APTX-222ENST00000478279 TARS2Q9BW92 718 aaKnown RBP11.55□□□□□ -0.56
APTX-222ENST00000478279 SCNM1Q9BWG6 230 aa11.55□□□□□ -0.56
APTX-222ENST00000478279 TASP1Q9H6P5 420 aa11.55□□□□□ -0.56
APTX-222ENST00000478279 TMEM134Q9H6X4 195 aa11.55□□□□□ -0.56
APTX-222ENST00000478279 GKN1Q9NS71 199 aa11.55□□□□□ -0.56
APTX-222ENST00000478279 PDRG1Q9NUG6 133 aa11.55□□□□□ -0.56
APTX-222ENST00000478279 SLC27A5Q9Y2P5 690 aa11.55□□□□□ -0.56
APTX-222ENST00000478279 TIMM13Q9Y5L4 95 aaPredicted RBP11.55□□□□□ -0.56
APTX-222ENST00000478279 CACNA1EQ15878 2313 aa11.55□□□□□ -0.56
APTX-222ENST00000478279 PHLPP2Q6ZVD8 1323 aa11.55□□□□□ -0.56
APTX-222ENST00000478279 LNP1A1A4G5 178 aa11.54□□□□□ -0.56
APTX-222ENST00000478279 BTBD18B2RXH4 712 aa11.54□□□□□ -0.56
APTX-222ENST00000478279 ABLIM1O14639 778 aa11.54□□□□□ -0.56
APTX-222ENST00000478279 MEFVO15553 781 aaPredicted RBP11.54□□□□□ -0.56
APTX-222ENST00000478279 EPB41L2O43491 1005 aaKnown RBP11.54□□□□□ -0.56
APTX-222ENST00000478279 PFKFB2O60825 505 aa11.54□□□□□ -0.56
APTX-222ENST00000478279 RNF40O75150 1001 aa11.54□□□□□ -0.56
APTX-222ENST00000478279 CTDNEP1O95476 244 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms