RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 BICD2Q8TD16 824 aa8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 TBCKQ8TEA7 893 aa8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 PRIMPOLQ96LW4 560 aa8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 UROC1Q96N76 676 aa8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 ARID3AQ99856 593 aa8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 FZD8Q9H461 694 aa8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 PDZD7Q9H5P4 517 aa8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 GOLGA2P5Q9HBQ8 144 aa8.07□□□□□ -1.12
SPTLC1-205ENST00000477888 URB1O60287 2271 aaKnown RBP8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 J3QKU1 62 aa8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 SLC27A2O14975 620 aa8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 PRPF3O43395 683 aaKnown RBP8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 FTH1P19P0C7X4 201 aa8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 MCM2P49736 904 aa8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 EXOSC10Q01780 885 aaKnown RBP8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 FAM187BQ17R55 369 aa8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 CTXN3Q4LDR2 81 aa8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 GLRA4Q5JXX5 417 aa8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 GPR158Q5T848 1215 aa8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 PEAR1Q5VY43 1037 aaPredicted RBP8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 NAIF1Q69YI7 327 aaPredicted RBP8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 DNAJB7Q7Z6W7 309 aaPredicted RBP8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 SCUBE3Q8IX30 993 aa8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 HDDC3Q8N4P3 179 aa8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 TSTD1Q8NFU3 115 aa8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 OLIG1Q8TAK6 271 aa8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 CNOT6LQ96LI5 555 aaKnown RBP8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 CAMK1GQ96NX5 476 aa8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 FNBP1Q96RU3 617 aa8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 HNRNPABQ99729 332 aaKnown RBP8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 P2RY13Q9BPV8 354 aa8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 LARP6Q9BRS8 491 aaKnown RBP8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 LXNQ9BS40 222 aa8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 POLR3CQ9BUI4 534 aaPredicted RBP8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 TPSD1Q9BZJ3 242 aa8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 CRISPLD1Q9H336 500 aa8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 ATXN3LQ9H3M9 355 aa8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 EBF3Q9H4W6 596 aa8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 TASP1Q9H6P5 420 aa8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 FSCN3Q9NQT6 498 aa8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 PRMT7Q9NVM4 692 aaPredicted RBP8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 THG1LQ9NWX6 298 aaKnown RBP8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 RGL1Q9NZL6 768 aa8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 PILRBQ9UKJ0 227 aa8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 TBX20Q9UMR3 447 aa8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 YIPF1Q9Y548 306 aa8.06□□□□□ -1.12
SPTLC1-205ENST00000477888 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 SMIM28A0A1B0GU29 152 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 GOLGA8AA7E2F4 631 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 GOLGA8BA8MQT2 603 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 N4BP3O15049 544 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 SH3BP5O60239 455 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 OPHN1O60890 802 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 DGAT1O75907 488 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 U2AF2P26368 475 aaKnown RBP eCLIP8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 HOXD12P35452 270 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 RCAN1P53805 252 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 AMPD2Q01433 879 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 CYP4F3Q08477 520 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 NECTIN1Q15223 517 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 EPHA7Q15375 998 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 MAPK6Q16659 721 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 XKR4Q5GH76 650 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 SPDYCQ5MJ68 293 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 TRIM68Q6AZZ1 485 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 MOXD1Q6UVY6 613 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 ALKAL1Q6UXT8 129 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 LPCAT2Q7L5N7 544 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 SLCO6A1Q86UG4 719 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 TMEFF1Q8IYR6 380 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 MDGA1Q8NFP4 955 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 RLN3Q8WXF3 142 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 ACDQ96AP0 544 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 FAM20AQ96MK3 541 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 SLC46A2Q9BY10 475 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 SMG9Q9H0W8 520 aaKnown RBP8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 ZSWIM4Q9H7M6 989 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 CAPN10Q9HC96 672 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 POLMQ9NP87 494 aaPredicted RBP8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 DNAAF2Q9NVR5 837 aaKnown RBP8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 KIAA1522Q9P206 1035 aaPredicted RBP8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 SLC6A14Q9UN76 642 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 GDAQ9Y2T3 454 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 MYO18BQ8IUG5 2567 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 ABCA7Q8IZY2 2146 aa8.05□□□□□ -1.12
SPTLC1-205ENST00000477888 SPTA1P02549 2419 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 VWA8A3KMH1 1905 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 M0R2N6 131 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 PODXLO00592 558 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 ARHGAP6O43182 974 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 SLC37A4O43826 429 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 GJB3O75712 270 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 SLITRK3O94933 977 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 OAZ2O95190 189 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 IGHDP01880 384 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 SERPINF2P08697 491 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 ARSAP15289 507 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 GABRR2P28476 465 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 GJA4P35212 333 aa8.04□□□□□ -1.12
SPTLC1-205ENST00000477888 P2RY2P41231 377 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms