RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 PPP1R11O60927 126 aaPredicted RBP5.34□□□□□ -1.55
CKS1B-207ENST00000477676 F2P00734 622 aa5.34□□□□□ -1.55
CKS1B-207ENST00000477676 SLC3A2P08195 630 aaKnown RBP5.34□□□□□ -1.55
CKS1B-207ENST00000477676 HSPD1P10809 573 aaKnown RBP5.34□□□□□ -1.55
CKS1B-207ENST00000477676 C6P13671 934 aa5.34□□□□□ -1.55
CKS1B-207ENST00000477676 MX1P20591 662 aa5.34□□□□□ -1.55
CKS1B-207ENST00000477676 KCNA5P22460 613 aa5.34□□□□□ -1.55
CKS1B-207ENST00000477676 GDF5P43026 501 aa5.34□□□□□ -1.55
CKS1B-207ENST00000477676 KCNJ6P48051 423 aa5.34□□□□□ -1.55
CKS1B-207ENST00000477676 CORO7P57737 925 aa5.34□□□□□ -1.55
CKS1B-207ENST00000477676 POU4F1Q01851 419 aa5.34□□□□□ -1.55
CKS1B-207ENST00000477676 CLCQ05315 142 aa5.34□□□□□ -1.55
CKS1B-207ENST00000477676 DLX2Q07687 328 aaPredicted RBP5.34□□□□□ -1.55
CKS1B-207ENST00000477676 RRP12Q5JTH9 1297 aaKnown RBP5.34□□□□□ -1.55
CKS1B-207ENST00000477676 BICRALQ6AI39 1079 aa5.34□□□□□ -1.55
CKS1B-207ENST00000477676 DBF4BQ8NFT6 615 aa5.34□□□□□ -1.55
CKS1B-207ENST00000477676 CAGE1Q8TC20 777 aa5.34□□□□□ -1.55
CKS1B-207ENST00000477676 C8orf49Q96NF6 230 aa5.34□□□□□ -1.55
CKS1B-207ENST00000477676 FERD3LQ96RJ6 166 aa5.34□□□□□ -1.55
CKS1B-207ENST00000477676 TGS1Q96RS0 853 aaKnown RBP5.34□□□□□ -1.55
CKS1B-207ENST00000477676 ALG1Q9BT22 464 aa5.34□□□□□ -1.55
CKS1B-207ENST00000477676 LNPKQ9C0E8 428 aa5.34□□□□□ -1.55
CKS1B-207ENST00000477676 UBP1Q9NZI7 540 aa5.34□□□□□ -1.55
CKS1B-207ENST00000477676 PMF1-BGLAPU3KQ54 211 aa5.34□□□□□ -1.55
CKS1B-207ENST00000477676 MYH9P35579 1960 aaKnown RBP5.34□□□□□ -1.55
CKS1B-207ENST00000477676 CACNA1AO00555 2505 aa5.34□□□□□ -1.56
CKS1B-207ENST00000477676 ABHD14A-ACY1A0A1B0GW23 586 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 SH3D21A4FU49 640 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 GH1P01241 217 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 ATF2P15336 505 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 HOXC8P31273 242 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 MRE11P49959 708 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 NHLH1Q02575 133 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 TCEAL1Q15170 157 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 CDC37Q16543 378 aaPredicted RBP5.33□□□□□ -1.56
CKS1B-207ENST00000477676 KIAA0753Q2KHM9 967 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 QRICH1Q2TAL8 776 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 HSDL1Q3SXM5 330 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 EPC2Q52LR7 807 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 ANKRD39Q53RE8 183 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 PLEKHG4Q58EX7 1191 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 TCEAL5Q5H9L2 206 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 CRTC3Q6UUV7 619 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 SERINC5Q86VE9 423 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 SLITRK4Q8IW52 837 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 TMEM192Q8IY95 271 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 ADGRF4Q8IZF3 695 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 Q8N1X5 172 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 MRPL38Q96DV4 380 aaKnown RBP5.33□□□□□ -1.56
CKS1B-207ENST00000477676 GPATCH3Q96I76 525 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 RMDN3Q96TC7 470 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 TM9SF2Q99805 663 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 C16orf70Q9BSU1 422 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 SPON2Q9BUD6 331 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 RNF38Q9H0F5 515 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 SLITRK6Q9H5Y7 841 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 JMJD4Q9H9V9 463 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 ALG13Q9NP73 1137 aaKnown RBP5.33□□□□□ -1.56
CKS1B-207ENST00000477676 PXMP2Q9NR77 195 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 NUDT5Q9UKK9 219 aa5.33□□□□□ -1.56
CKS1B-207ENST00000477676 ZMYM6O95789 1325 aa5.32□□□□□ -1.56
CKS1B-207ENST00000477676 RAD50Q92878 1312 aa5.32□□□□□ -1.56
CKS1B-207ENST00000477676 CEP250Q9BV73 2442 aa5.32□□□□□ -1.56
CKS1B-207ENST00000477676 DOCK6Q96HP0 2047 aa5.32□□□□□ -1.56
CKS1B-207ENST00000477676 SPTBN2O15020 2390 aa5.32□□□□□ -1.56
CKS1B-207ENST00000477676 H3BNC9 293 aa5.32□□□□□ -1.56
CKS1B-207ENST00000477676 NCAM1P13591 858 aa5.32□□□□□ -1.56
CKS1B-207ENST00000477676 ITGA4P13612 1032 aa5.32□□□□□ -1.56
CKS1B-207ENST00000477676 CASTP20810 708 aaKnown RBP5.32□□□□□ -1.56
CKS1B-207ENST00000477676 TACR2P21452 398 aa5.32□□□□□ -1.56
CKS1B-207ENST00000477676 GTF2F1P35269 517 aaKnown RBP eCLIP5.32□□□□□ -1.56
CKS1B-207ENST00000477676 HSD17B4P51659 736 aa5.32□□□□□ -1.56
CKS1B-207ENST00000477676 PMS1P54277 932 aaKnown RBP5.32□□□□□ -1.56
CKS1B-207ENST00000477676 PDE1AP54750 535 aa5.32□□□□□ -1.56
CKS1B-207ENST00000477676 GHRHRQ02643 423 aa5.32□□□□□ -1.56
CKS1B-207ENST00000477676 CAMK1Q14012 370 aa5.32□□□□□ -1.56
CKS1B-207ENST00000477676 STXBP2Q15833 593 aa5.32□□□□□ -1.56
CKS1B-207ENST00000477676 DGKDQ16760 1214 aa5.32□□□□□ -1.56
CKS1B-207ENST00000477676 BRDTQ58F21 947 aaPredicted RBP5.32□□□□□ -1.56
CKS1B-207ENST00000477676 CELF3Q5SZQ8 465 aaKnown RBP5.32□□□□□ -1.56
CKS1B-207ENST00000477676 MYOCDQ8IZQ8 938 aa5.32□□□□□ -1.56
CKS1B-207ENST00000477676 ENAHQ8N8S7 591 aaPredicted RBP5.32□□□□□ -1.56
CKS1B-207ENST00000477676 PPTC7Q8NI37 304 aa5.32□□□□□ -1.56
CKS1B-207ENST00000477676 NSUN6Q8TEA1 469 aaKnown RBP5.32□□□□□ -1.56
CKS1B-207ENST00000477676 MTMR8Q96EF0 704 aa5.32□□□□□ -1.56
CKS1B-207ENST00000477676 LOXL4Q96JB6 756 aa5.32□□□□□ -1.56
CKS1B-207ENST00000477676 TTC14Q96N46 770 aa5.32□□□□□ -1.56
CKS1B-207ENST00000477676 SAMD11Q96NU1 681 aa5.32□□□□□ -1.56
CKS1B-207ENST00000477676 JMJD8Q96S16 334 aa5.32□□□□□ -1.56
CKS1B-207ENST00000477676 PDCD2LQ9BRP1 358 aa5.32□□□□□ -1.56
CKS1B-207ENST00000477676 IL25Q9H293 177 aa5.32□□□□□ -1.56
CKS1B-207ENST00000477676 HELLSQ9NRZ9 838 aa5.32□□□□□ -1.56
CKS1B-207ENST00000477676 TOMM22Q9NS69 142 aa5.32□□□□□ -1.56
CKS1B-207ENST00000477676 ABCB11O95342 1321 aa5.31□□□□□ -1.56
CKS1B-207ENST00000477676 CCDC171Q6TFL3 1326 aa5.31□□□□□ -1.56
CKS1B-207ENST00000477676 B4E1Z4 1266 aa5.31□□□□□ -1.56
CKS1B-207ENST00000477676 GRM6O15303 877 aa5.31□□□□□ -1.56
CKS1B-207ENST00000477676 LINC01565O15544 149 aa5.31□□□□□ -1.56
CKS1B-207ENST00000477676 DCXO43602 365 aa5.31□□□□□ -1.56
CKS1B-207ENST00000477676 TBX10O75333 385 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms