RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 ANKRD13CQ8N6S4 541 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 NCOA7Q8NI08 942 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 SMARCC2Q8TAQ2 1214 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 CD99L2Q8TCZ2 262 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 IGDCC4Q8TDY8 1250 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 NOX5Q96PH1 765 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 PPP1R16BQ96T49 567 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 NUP88Q99567 741 aaPredicted RBP6.07□□□□□ -1.44
VPS45-207ENST00000477558 SLF1Q9BQI6 1058 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 YIPF4Q9BSR8 244 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 AGXT2Q9BYV1 514 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 RNF38Q9H0F5 515 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 PORCNQ9H237 461 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 SLC38A10Q9HBR0 1119 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 FBXO28Q9NVF7 368 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 HOXC10Q9NYD6 342 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 DTLQ9NZJ0 730 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 STX8Q9UNK0 236 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.07□□□□□ -1.44
VPS45-207ENST00000477558 WASF3Q9UPY6 502 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 BAZ2BQ9UIF8 2168 aaKnown RBP6.06□□□□□ -1.44
VPS45-207ENST00000477558 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.06□□□□□ -1.44
VPS45-207ENST00000477558 CBX4O00257 560 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 SCDO00767 359 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 SH2B2O14492 632 aaPredicted RBP6.06□□□□□ -1.44
VPS45-207ENST00000477558 FLOT1O75955 427 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 HOXC6P09630 235 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 EXOSC10Q01780 885 aaKnown RBP6.06□□□□□ -1.44
VPS45-207ENST00000477558 ZNF543Q08ER8 600 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 GRB14Q14449 540 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 TMEM132BQ14DG7 1078 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 SLC35G1Q2M3R5 365 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 ADCK5Q3MIX3 580 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 PAN2Q504Q3 1202 aaKnown RBP6.06□□□□□ -1.44
VPS45-207ENST00000477558 TEPPQ6URK8 271 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 SPOCD1Q6ZMY3 1216 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 EP400NLQ6ZTU2 488 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 THNSL2Q86YJ6 484 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 NOSTRINQ8IVI9 506 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 NLGN4XQ8N0W4 816 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 NXPE1Q8N323 547 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 UBR7Q8N806 425 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 GPRC5AQ8NFJ5 357 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 BHLHE22Q8NFJ8 381 aaPredicted RBP6.06□□□□□ -1.44
VPS45-207ENST00000477558 SIGLEC10Q96LC7 697 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 MAP3K14Q99558 947 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 MOV10L1Q9BXT6 1211 aaKnown RBP6.06□□□□□ -1.44
VPS45-207ENST00000477558 SPATC1LQ9H0A9 340 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 RANBP17Q9H2T7 1088 aaKnown RBP6.06□□□□□ -1.44
VPS45-207ENST00000477558 LY9Q9HBG7 655 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 CD320Q9NPF0 282 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 RIC8BQ9NVN3 520 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 SRRDQ9UH36 339 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 FEM1BQ9UK73 627 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 GJD2Q9UKL4 321 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 FAN1Q9Y2M0 1017 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 PTPN22Q9Y2R2 807 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 IRAK3Q9Y616 596 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 ATP23Q9Y6H3 246 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 ADAMTS20P59510 1910 aa6.06□□□□□ -1.44
VPS45-207ENST00000477558 MCM3APO60318 1980 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 SLC12A8A0AV02 714 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 PTPDC1A2A3K4 754 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 TCAF2A6NFQ2 919 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 KRT37O76014 449 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 HMGB1P09429 215 aaKnown RBP6.05□□□□□ -1.44
VPS45-207ENST00000477558 FAHP16930 419 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 PTPN1P18031 435 aaKnown RBP6.05□□□□□ -1.44
VPS45-207ENST00000477558 MCCP23508 829 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 MAPK4P31152 587 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 LIFRP42702 1097 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 SLC1A4P43007 532 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 PSMC4P43686 418 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 STAT2P52630 851 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 RCAN1P53805 252 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 EVCP57679 992 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 PRKCZQ05513 592 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 TRDNQ13061 729 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 KRT32Q14532 448 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 SEPT7Q16181 437 aaKnown RBP6.05□□□□□ -1.44
VPS45-207ENST00000477558 GPATCH4Q5T3I0 446 aaKnown RBP6.05□□□□□ -1.44
VPS45-207ENST00000477558 PKN3Q6P5Z2 889 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 GPR142Q7Z601 462 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 B3GNT8Q7Z7M8 397 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 FAM160B2Q86V87 743 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 ABRAQ8N0Z2 381 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 PRPF38AQ8NAV1 312 aaKnown RBP6.05□□□□□ -1.44
VPS45-207ENST00000477558 LEO1Q8WVC0 666 aaPredicted RBP6.05□□□□□ -1.44
VPS45-207ENST00000477558 SOCS4Q8WXH5 440 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 MTMR8Q96EF0 704 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 TEX13BQ9BXU2 312 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 TOMM22Q9NS69 142 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 TRIM17Q9Y577 477 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 KCTD3Q9Y597 815 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 NUB1Q9Y5A7 615 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 SNX14Q9Y5W7 946 aa6.05□□□□□ -1.44
VPS45-207ENST00000477558 ZNF891A8MT65 544 aaPredicted RBP6.04□□□□□ -1.44
VPS45-207ENST00000477558 NPIPB6E9PJ23 425 aa6.04□□□□□ -1.44
VPS45-207ENST00000477558 PRC1O43663 620 aa6.04□□□□□ -1.44
VPS45-207ENST00000477558 CLASP2O75122 1294 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms