RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 KCTD10Q9H3F6 313 aa19.06■□□□□ 0.64
PTPN7-209ENST00000477554 PIDD1Q9HB75 910 aa19.06■□□□□ 0.64
PTPN7-209ENST00000477554 DNMT3BQ9UBC3 853 aaKnown RBP19.06■□□□□ 0.64
PTPN7-209ENST00000477554 AGAP1Q9UPQ3 857 aa19.06■□□□□ 0.64
PTPN7-209ENST00000477554 CYB561D2O14569 222 aa19.05■□□□□ 0.64
PTPN7-209ENST00000477554 ZXDAP98168 799 aa19.05■□□□□ 0.64
PTPN7-209ENST00000477554 SNRNP35Q16560 246 aaKnown RBP19.05■□□□□ 0.64
PTPN7-209ENST00000477554 SLC5A9Q2M3M2 681 aa19.05■□□□□ 0.64
PTPN7-209ENST00000477554 LIN9Q5TKA1 542 aa19.05■□□□□ 0.64
PTPN7-209ENST00000477554 OVOS1Q6IE37 1185 aa19.05■□□□□ 0.64
PTPN7-209ENST00000477554 STXBP4Q6ZWJ1 553 aa19.05■□□□□ 0.64
PTPN7-209ENST00000477554 APPL2Q8NEU8 664 aa19.05■□□□□ 0.64
PTPN7-209ENST00000477554 ZNF516Q92618 1163 aa19.05■□□□□ 0.64
PTPN7-209ENST00000477554 TSPAN18Q96SJ8 248 aa19.05■□□□□ 0.64
PTPN7-209ENST00000477554 CYP4F11Q9HBI6 524 aa19.05■□□□□ 0.64
PTPN7-209ENST00000477554 NR2E1Q9Y466 385 aa19.05■□□□□ 0.64
PTPN7-209ENST00000477554 UBE4BO95155 1302 aa19.04■□□□□ 0.64
PTPN7-209ENST00000477554 H7C4K7 107 aa19.04■□□□□ 0.64
PTPN7-209ENST00000477554 LDHAP00338 332 aaKnown RBP19.04■□□□□ 0.64
PTPN7-209ENST00000477554 C1RP00736 705 aa19.04■□□□□ 0.64
PTPN7-209ENST00000477554 ATF2P15336 505 aa19.04■□□□□ 0.64
PTPN7-209ENST00000477554 TAF6P49848 677 aa19.04■□□□□ 0.64
PTPN7-209ENST00000477554 POU5F1Q01860 360 aaKnown RBP19.04■□□□□ 0.64
PTPN7-209ENST00000477554 CYP24A1Q07973 514 aa19.04■□□□□ 0.64
PTPN7-209ENST00000477554 PTPN21Q16825 1174 aa19.04■□□□□ 0.64
PTPN7-209ENST00000477554 CCDC183Q5T5S1 534 aa19.04■□□□□ 0.64
PTPN7-209ENST00000477554 CAVIN1Q6NZI2 390 aaKnown RBP19.04■□□□□ 0.64
PTPN7-209ENST00000477554 LRRTM3Q86VH5 581 aa19.04■□□□□ 0.64
PTPN7-209ENST00000477554 CSGALNACT2Q8N6G5 542 aa19.04■□□□□ 0.64
PTPN7-209ENST00000477554 ING5Q8WYH8 240 aa19.04■□□□□ 0.64
PTPN7-209ENST00000477554 CCDC127Q96BQ5 260 aa19.04■□□□□ 0.64
PTPN7-209ENST00000477554 NUP62CLQ9H1M0 184 aa19.04■□□□□ 0.64
PTPN7-209ENST00000477554 CLSTN2Q9H4D0 955 aa19.04■□□□□ 0.64
PTPN7-209ENST00000477554 INTS13Q9NVM9 706 aa19.04■□□□□ 0.64
PTPN7-209ENST00000477554 SLC27A5Q9Y2P5 690 aa19.04■□□□□ 0.64
PTPN7-209ENST00000477554 ZNF233A6NK53 670 aa19.03■□□□□ 0.64
PTPN7-209ENST00000477554 GPR37L1O60883 481 aa19.03■□□□□ 0.64
PTPN7-209ENST00000477554 PDGFBP01127 241 aaPredicted RBP19.03■□□□□ 0.64
PTPN7-209ENST00000477554 KRT19P08727 400 aa19.03■□□□□ 0.64
PTPN7-209ENST00000477554 ALADP13716 330 aa19.03■□□□□ 0.64
PTPN7-209ENST00000477554 CPB1P15086 417 aa19.03■□□□□ 0.64
PTPN7-209ENST00000477554 TYMPP19971 482 aa19.03■□□□□ 0.64
PTPN7-209ENST00000477554 GBP2P32456 591 aaPredicted RBP19.03■□□□□ 0.64
PTPN7-209ENST00000477554 TMEM31Q5JXX7 168 aa19.03■□□□□ 0.64
PTPN7-209ENST00000477554 HFE2Q6ZVN8 426 aa19.03■□□□□ 0.64
PTPN7-209ENST00000477554 OSTM1Q86WC4 334 aa19.03■□□□□ 0.64
PTPN7-209ENST00000477554 ZDHHC14Q8IZN3 488 aa19.03■□□□□ 0.64
PTPN7-209ENST00000477554 HS6ST3Q8IZP7 471 aa19.03■□□□□ 0.64
PTPN7-209ENST00000477554 ATAD1Q8NBU5 361 aa19.03■□□□□ 0.64
PTPN7-209ENST00000477554 EDAQ92838 391 aa19.03■□□□□ 0.64
PTPN7-209ENST00000477554 TCEAL4Q96EI5 215 aa19.03■□□□□ 0.64
PTPN7-209ENST00000477554 RPP25Q9BUL9 199 aaKnown RBP19.03■□□□□ 0.64
PTPN7-209ENST00000477554 RHOBTB2Q9BYZ6 727 aa19.03■□□□□ 0.64
PTPN7-209ENST00000477554 TMLHEQ9NVH6 421 aa19.03■□□□□ 0.64
PTPN7-209ENST00000477554 CEP72Q9P209 647 aa19.03■□□□□ 0.64
PTPN7-209ENST00000477554 L1RE1Q9UN81 338 aa19.03■□□□□ 0.64
PTPN7-209ENST00000477554 USTQ9Y2C2 406 aa19.03■□□□□ 0.64
PTPN7-209ENST00000477554 INSL5Q9Y5Q6 135 aa19.03■□□□□ 0.64
PTPN7-209ENST00000477554 COL4A3Q01955 1670 aa19.03■□□□□ 0.64
PTPN7-209ENST00000477554 ARHGEF37A1IGU5 675 aa19.02■□□□□ 0.64
PTPN7-209ENST00000477554 KPNA7A9QM74 516 aa19.02■□□□□ 0.64
PTPN7-209ENST00000477554 NARSO43776 548 aaKnown RBP19.02■□□□□ 0.64
PTPN7-209ENST00000477554 RHOBTB3O94955 611 aa19.02■□□□□ 0.64
PTPN7-209ENST00000477554 CST3P01034 146 aaPredicted RBP19.02■□□□□ 0.64
PTPN7-209ENST00000477554 DLATP10515 647 aaKnown RBP19.02■□□□□ 0.64
PTPN7-209ENST00000477554 ODC1P11926 461 aa19.02■□□□□ 0.64
PTPN7-209ENST00000477554 CCR2P41597 374 aa19.02■□□□□ 0.64
PTPN7-209ENST00000477554 BFSP1Q12934 665 aa19.02■□□□□ 0.64
PTPN7-209ENST00000477554 TCEAL8Q8IYN2 117 aa19.02■□□□□ 0.64
PTPN7-209ENST00000477554 XXYLT1Q8NBI6 393 aa19.02■□□□□ 0.64
PTPN7-209ENST00000477554 C1QTNF1Q9BXJ1 281 aa19.02■□□□□ 0.64
PTPN7-209ENST00000477554 DMAC2Q9NW81 257 aa19.02■□□□□ 0.64
PTPN7-209ENST00000477554 DPP7Q9UHL4 492 aa19.02■□□□□ 0.64
PTPN7-209ENST00000477554 MTMR11A4FU01 709 aa19.01■□□□□ 0.63
PTPN7-209ENST00000477554 PRRG1O14668 218 aa19.01■□□□□ 0.63
PTPN7-209ENST00000477554 LETM1O95202 739 aaPredicted RBP19.01■□□□□ 0.63
PTPN7-209ENST00000477554 CYP11A1P05108 521 aa19.01■□□□□ 0.63
PTPN7-209ENST00000477554 MYL1P05976 194 aa19.01■□□□□ 0.63
PTPN7-209ENST00000477554 HNRNPA1P09651 372 aaKnown RBP eCLIP19.01■□□□□ 0.63
PTPN7-209ENST00000477554 HOXA9P31269 272 aa19.01■□□□□ 0.63
PTPN7-209ENST00000477554 DLG4P78352 724 aa19.01■□□□□ 0.63
PTPN7-209ENST00000477554 TWF1Q12792 350 aa19.01■□□□□ 0.63
PTPN7-209ENST00000477554 DUSP4Q13115 394 aa19.01■□□□□ 0.63
PTPN7-209ENST00000477554 USP37Q86T82 979 aa19.01■□□□□ 0.63
PTPN7-209ENST00000477554 PDCL2Q8N4E4 241 aa19.01■□□□□ 0.63
PTPN7-209ENST00000477554 ASIC4Q96FT7 647 aa19.01■□□□□ 0.63
PTPN7-209ENST00000477554 DNAJC25Q9H1X3 360 aa19.01■□□□□ 0.63
PTPN7-209ENST00000477554 KCNK12Q9HB15 430 aa19.01■□□□□ 0.63
PTPN7-209ENST00000477554 TMEM63CQ9P1W3 806 aa19.01■□□□□ 0.63
PTPN7-209ENST00000477554 AFF4Q9UHB7 1163 aaKnown RBP19.01■□□□□ 0.63
PTPN7-209ENST00000477554 NME7Q9Y5B8 376 aa19.01■□□□□ 0.63
PTPN7-209ENST00000477554 TMEM191BP0C7N4 346 aa19■□□□□ 0.63
PTPN7-209ENST00000477554 GJA1P17302 382 aa19■□□□□ 0.63
PTPN7-209ENST00000477554 COL9A1P20849 921 aa19■□□□□ 0.63
PTPN7-209ENST00000477554 FSHRP23945 695 aa19■□□□□ 0.63
PTPN7-209ENST00000477554 ACAT1P24752 427 aaKnown RBP19■□□□□ 0.63
PTPN7-209ENST00000477554 PSMD6Q15008 389 aa19■□□□□ 0.63
PTPN7-209ENST00000477554 CAMK4Q16566 473 aa19■□□□□ 0.63
PTPN7-209ENST00000477554 UVSSAQ2YD98 709 aa19■□□□□ 0.63
PTPN7-209ENST00000477554 SLC39A12Q504Y0 691 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms