RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 GCNT1Q02742 428 aa17.34■□□□□ 0.37
VHL-203ENST00000477538 TAP1Q03518 808 aa17.34■□□□□ 0.37
VHL-203ENST00000477538 ELAVL2Q12926 359 aaKnown RBP17.34■□□□□ 0.37
VHL-203ENST00000477538 SPECC1LQ69YQ0 1117 aa17.34■□□□□ 0.37
VHL-203ENST00000477538 IQCEQ6IPM2 695 aa17.34■□□□□ 0.37
VHL-203ENST00000477538 TOP6BLQ8N6T0 577 aa17.34■□□□□ 0.37
VHL-203ENST00000477538 APPL2Q8NEU8 664 aa17.34■□□□□ 0.37
VHL-203ENST00000477538 KAT5Q92993 513 aa17.34■□□□□ 0.37
VHL-203ENST00000477538 SAMD11Q96NU1 681 aa17.34■□□□□ 0.37
VHL-203ENST00000477538 ARID3AQ99856 593 aa17.34■□□□□ 0.37
VHL-203ENST00000477538 C17orf80Q9BSJ5 609 aa17.34■□□□□ 0.37
VHL-203ENST00000477538 PLVAPQ9BX97 442 aa17.34■□□□□ 0.37
VHL-203ENST00000477538 BCO2Q9BYV7 579 aa17.34■□□□□ 0.37
VHL-203ENST00000477538 GPR62Q9BZJ7 368 aa17.34■□□□□ 0.37
VHL-203ENST00000477538 SMYD3Q9H7B4 428 aa17.34■□□□□ 0.37
VHL-203ENST00000477538 DNAJC12Q9UKB3 198 aa17.34■□□□□ 0.37
VHL-203ENST00000477538 AJAP1Q9UKB5 411 aaPredicted RBP17.34■□□□□ 0.37
VHL-203ENST00000477538 PCDHB8Q9UN66 801 aa17.34■□□□□ 0.37
VHL-203ENST00000477538 COLQQ9Y215 455 aaPredicted RBP17.34■□□□□ 0.37
VHL-203ENST00000477538 MTCL1Q9Y4B5 1905 aaKnown RBP17.34■□□□□ 0.37
VHL-203ENST00000477538 DAAM1Q9Y4D1 1078 aa17.34■□□□□ 0.37
VHL-203ENST00000477538 MYO7AQ13402 2215 aa17.33■□□□□ 0.37
VHL-203ENST00000477538 FGF18O76093 207 aa17.33■□□□□ 0.36
VHL-203ENST00000477538 CDC25BP30305 580 aa17.33■□□□□ 0.36
VHL-203ENST00000477538 MFAP3P55082 362 aa17.33■□□□□ 0.36
VHL-203ENST00000477538 ARHGAP44Q17R89 818 aa17.33■□□□□ 0.36
VHL-203ENST00000477538 SOWAHAQ2M3V2 549 aa17.33■□□□□ 0.36
VHL-203ENST00000477538 PRPF38BQ5VTL8 546 aaKnown RBP17.33■□□□□ 0.36
VHL-203ENST00000477538 FAM171A1Q5VUB5 890 aa17.33■□□□□ 0.36
VHL-203ENST00000477538 PPP2R2DQ66LE6 453 aa17.33■□□□□ 0.36
VHL-203ENST00000477538 ENOSF1Q7L5Y1 443 aa17.33■□□□□ 0.36
VHL-203ENST00000477538 DPH6Q7L8W6 267 aa17.33■□□□□ 0.36
VHL-203ENST00000477538 TMC6Q7Z403 805 aa17.33■□□□□ 0.36
VHL-203ENST00000477538 LIMS2Q7Z4I7 341 aa17.33■□□□□ 0.36
VHL-203ENST00000477538 SPRED2Q7Z698 418 aa17.33■□□□□ 0.36
VHL-203ENST00000477538 KLHL23Q8NBE8 558 aa17.33■□□□□ 0.36
VHL-203ENST00000477538 KREMEN1Q96MU8 473 aa17.33■□□□□ 0.36
VHL-203ENST00000477538 TGS1Q96RS0 853 aaKnown RBP17.33■□□□□ 0.36
VHL-203ENST00000477538 NUP58Q9BVL2 599 aa17.33■□□□□ 0.36
VHL-203ENST00000477538 SDCBP2Q9H190 292 aa17.33■□□□□ 0.36
VHL-203ENST00000477538 CYP3A43Q9HB55 503 aa17.33■□□□□ 0.36
VHL-203ENST00000477538 NLRC4Q9NPP4 1024 aa17.33■□□□□ 0.36
VHL-203ENST00000477538 CEP72Q9P209 647 aa17.33■□□□□ 0.36
VHL-203ENST00000477538 FBXL5Q9UKA1 691 aa17.33■□□□□ 0.36
VHL-203ENST00000477538 MTUS1Q9ULD2 1270 aa17.33■□□□□ 0.36
VHL-203ENST00000477538 L1RE1Q9UN81 338 aa17.33■□□□□ 0.36
VHL-203ENST00000477538 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.33■□□□□ 0.36
VHL-203ENST00000477538 C5orf67F2Z3F1 127 aa17.32■□□□□ 0.36
VHL-203ENST00000477538 SYN3O14994 580 aa17.32■□□□□ 0.36
VHL-203ENST00000477538 EFEMP2O95967 443 aa17.32■□□□□ 0.36
VHL-203ENST00000477538 WEE2P0C1S8 567 aa17.32■□□□□ 0.36
VHL-203ENST00000477538 TYMPP19971 482 aa17.32■□□□□ 0.36
VHL-203ENST00000477538 DNAJB2P25686 324 aa17.32■□□□□ 0.36
VHL-203ENST00000477538 TKTP29401 623 aaKnown RBP17.32■□□□□ 0.36
VHL-203ENST00000477538 CDH8P55286 799 aa17.32■□□□□ 0.36
VHL-203ENST00000477538 ERVK-21P61565 698 aa17.32■□□□□ 0.36
VHL-203ENST00000477538 YWHAEP62258 255 aaKnown RBP17.32■□□□□ 0.36
VHL-203ENST00000477538 PLCB3Q01970 1234 aa17.32■□□□□ 0.36
VHL-203ENST00000477538 KRT17Q04695 432 aa17.32■□□□□ 0.36
VHL-203ENST00000477538 RAPGEF1Q13905 1077 aa17.32■□□□□ 0.36
VHL-203ENST00000477538 FIGNQ5HY92 759 aa17.32■□□□□ 0.36
VHL-203ENST00000477538 WSCD1Q658N2 575 aa17.32■□□□□ 0.36
VHL-203ENST00000477538 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.32■□□□□ 0.36
VHL-203ENST00000477538 CACNA2D4Q7Z3S7 1137 aa17.32■□□□□ 0.36
VHL-203ENST00000477538 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.32■□□□□ 0.36
VHL-203ENST00000477538 DDX53Q86TM3 631 aaKnown RBP17.32■□□□□ 0.36
VHL-203ENST00000477538 RNF168Q8IYW5 571 aaPredicted RBP17.32■□□□□ 0.36
VHL-203ENST00000477538 ADGRF2Q8IZF7 708 aa17.32■□□□□ 0.36
VHL-203ENST00000477538 TMEM86AQ8N2M4 240 aa17.32■□□□□ 0.36
VHL-203ENST00000477538 PDCL2Q8N4E4 241 aa17.32■□□□□ 0.36
VHL-203ENST00000477538 IQCDQ96DY2 449 aa17.32■□□□□ 0.36
VHL-203ENST00000477538 VN1R3Q9BXE9 311 aa17.32■□□□□ 0.36
VHL-203ENST00000477538 NAA15Q9BXJ9 866 aaKnown RBP17.32■□□□□ 0.36
VHL-203ENST00000477538 TTYH3Q9C0H2 523 aa17.32■□□□□ 0.36
VHL-203ENST00000477538 SLC28A3Q9HAS3 691 aa17.32■□□□□ 0.36
VHL-203ENST00000477538 DSEQ9UL01 958 aa17.32■□□□□ 0.36
VHL-203ENST00000477538 TIMM13Q9Y5L4 95 aaPredicted RBP17.32■□□□□ 0.36
VHL-203ENST00000477538 PLXNA3P51805 1871 aa17.32■□□□□ 0.36
VHL-203ENST00000477538 TACC1O75410 805 aa17.31■□□□□ 0.36
VHL-203ENST00000477538 SOD2P04179 222 aa17.31■□□□□ 0.36
VHL-203ENST00000477538 CYP11A1P05108 521 aa17.31■□□□□ 0.36
VHL-203ENST00000477538 RB1P06400 928 aa17.31■□□□□ 0.36
VHL-203ENST00000477538 CD58P19256 250 aa17.31■□□□□ 0.36
VHL-203ENST00000477538 FGFR3P22607 806 aa17.31■□□□□ 0.36
VHL-203ENST00000477538 TRIM14Q14142 442 aa17.31■□□□□ 0.36
VHL-203ENST00000477538 METTL23Q86XA0 190 aa17.31■□□□□ 0.36
VHL-203ENST00000477538 CEP57Q86XR8 500 aa17.31■□□□□ 0.36
VHL-203ENST00000477538 DRC7Q8IY82 874 aa17.31■□□□□ 0.36
VHL-203ENST00000477538 KBTBD7Q8WVZ9 684 aa17.31■□□□□ 0.36
VHL-203ENST00000477538 JAKMIP2Q96AA8 810 aa17.31■□□□□ 0.36
VHL-203ENST00000477538 TIFAQ96CG3 184 aa17.31■□□□□ 0.36
VHL-203ENST00000477538 MRPL45Q9BRJ2 306 aaKnown RBP17.31■□□□□ 0.36
VHL-203ENST00000477538 HERC2P3Q9BVR0 1158 aa17.31■□□□□ 0.36
VHL-203ENST00000477538 EDEM3Q9BZQ6 932 aa17.31■□□□□ 0.36
VHL-203ENST00000477538 FAM124BQ9H5Z6 455 aaPredicted RBP17.31■□□□□ 0.36
VHL-203ENST00000477538 CISHQ9NSE2 258 aa17.31■□□□□ 0.36
VHL-203ENST00000477538 RANBP2P49792 3224 aaKnown RBP17.31■□□□□ 0.36
VHL-203ENST00000477538 GYPCP04921 128 aa17.3■□□□□ 0.36
VHL-203ENST00000477538 FAM163BP0C2L3 166 aa17.3■□□□□ 0.36
VHL-203ENST00000477538 WARSP23381 471 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms