RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 FAM114A2Q9NRY5 505 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 ATP8A2Q9NTI2 1148 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 RNF19AQ9NV58 838 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 INTS13Q9NVM9 706 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 QPCTLQ9NXS2 382 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 DBF4Q9UBU7 674 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-212ENST00000477520 REV1Q9UBZ9 1251 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 KLHL3Q9UH77 587 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 LIMA1Q9UHB6 759 aaKnown RBP5.07□□□□□ -1.6
PTCD3-212ENST00000477520 TMEM98Q9Y2Y6 226 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 ZNF831Q5JPB2 1677 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 PAPPAQ13219 1627 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 LY75O60449 1722 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 MED23Q9ULK4 1368 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 IRS2Q9Y4H2 1338 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 A0A087WZG4 1122 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 SMIM31A0A1B0GVY4 71 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 PTPDC1A2A3K4 754 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 FAM221AA4D161 298 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 IPO5O00410 1097 aaKnown RBP5.06□□□□□ -1.6
PTCD3-212ENST00000477520 MATN3O15232 486 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 ZBED4O75132 1171 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 SURF6O75683 361 aaKnown RBP5.06□□□□□ -1.6
PTCD3-212ENST00000477520 P4HBP07237 508 aaKnown RBP5.06□□□□□ -1.6
PTCD3-212ENST00000477520 SYPP08247 313 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 CYP19A1P11511 503 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-212ENST00000477520 GNAZP19086 355 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 DRD4P21917 467 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 S100A1P23297 94 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 SP100P23497 879 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-212ENST00000477520 MSH2P43246 934 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 CRKLP46109 303 aaKnown RBP5.06□□□□□ -1.6
PTCD3-212ENST00000477520 PEX5P50542 639 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 PCBP3P57721 371 aaKnown RBP5.06□□□□□ -1.6
PTCD3-212ENST00000477520 TNNC1P63316 161 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 TUBA4AP68366 448 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 OCRLQ01968 901 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 GUCY1A3Q02108 690 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 PTH1RQ03431 593 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 BNIP1Q12981 228 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 ZBTB17Q13105 803 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 LSAMPQ13449 338 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 MORC3Q14149 939 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 SPA17Q15506 151 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 MEA1Q16626 185 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 CCDC153Q494R4 210 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 GALNTL6Q49A17 601 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 VWA3BQ502W6 1294 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 HSP90AA5PQ58FG0 334 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 ODF2Q5BJF6 829 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 FIGNQ5HY92 759 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 ANO7Q6IWH7 933 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 GALNT18Q6P9A2 607 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 TMEM154Q6P9G4 183 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 ZNF554Q86TJ5 538 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 DNAJC10Q8IXB1 793 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 IQCF2Q8IXL9 164 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 FAM186BQ8IYM0 893 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 ZNF655Q8N720 491 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-212ENST00000477520 CNBD1Q8NA66 436 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 PPFIBP2Q8ND30 876 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 SPATA20Q8TB22 786 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 INPP5DQ92835 1189 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 AZIN2Q96A70 460 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 KLHL29Q96CT2 875 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 HIC2Q96JB3 615 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 C8orf76Q96K31 380 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 PBKQ96KB5 322 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 CCDC43Q96MW1 224 aaKnown RBP5.06□□□□□ -1.6
PTCD3-212ENST00000477520 NEUROD6Q96NK8 337 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 ASB16Q96NS5 453 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 GSDMAQ96QA5 445 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 XPO6Q96QU8 1125 aaKnown RBP5.06□□□□□ -1.6
PTCD3-212ENST00000477520 CAMKK2Q96RR4 588 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 CGREF1Q99674 301 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 MAK16Q9BXY0 300 aaKnown RBP5.06□□□□□ -1.6
PTCD3-212ENST00000477520 FAM129AQ9BZQ8 928 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 ASCC2Q9H1I8 757 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-212ENST00000477520 DCLRE1BQ9H816 532 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 RNPEPL1Q9HAU8 725 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 TNFRSF12AQ9NP84 129 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 PPANQ9NQ55 473 aaKnown RBP5.06□□□□□ -1.6
PTCD3-212ENST00000477520 DDX21Q9NR30 783 aaKnown RBP eCLIP5.06□□□□□ -1.6
PTCD3-212ENST00000477520 HELLSQ9NRZ9 838 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 TXLNGQ9NUQ3 528 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 AATFQ9NY61 560 aaKnown RBP eCLIP5.06□□□□□ -1.6
PTCD3-212ENST00000477520 PPP1R1BQ9UD71 204 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-212ENST00000477520 CNOT11Q9UKZ1 510 aaKnown RBP5.06□□□□□ -1.6
PTCD3-212ENST00000477520 GNEQ9Y223 722 aaKnown RBP5.06□□□□□ -1.6
PTCD3-212ENST00000477520 GPR55Q9Y2T6 319 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-212ENST00000477520 BZW2Q9Y6E2 419 aaKnown RBP5.06□□□□□ -1.6
PTCD3-212ENST00000477520 DUSP10Q9Y6W6 482 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 KCPQ6ZWJ8 1503 aa5.06□□□□□ -1.6
PTCD3-212ENST00000477520 TNS1Q9HBL0 1735 aaKnown RBP5.06□□□□□ -1.6
PTCD3-212ENST00000477520 ZNF233A6NK53 670 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 CCDC169A6NNP5 214 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 H7C1D1 291 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 CETN3O15182 167 aa5.05□□□□□ -1.6
PTCD3-212ENST00000477520 TPD52L2O43399 206 aaKnown RBP5.05□□□□□ -1.6
PTCD3-212ENST00000477520 CYTH3O43739 400 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms