RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 UBR7Q8N806 425 aa7.07□□□□□ -1.28
CCDC30-209ENST00000477155 C1orf131Q8NDD1 294 aaKnown RBP7.07□□□□□ -1.28
CCDC30-209ENST00000477155 KRT35Q92764 455 aa7.07□□□□□ -1.28
CCDC30-209ENST00000477155 ABCB6Q9NP58 842 aa7.07□□□□□ -1.28
CCDC30-209ENST00000477155 TRMT13Q9NUP7 481 aaKnown RBP7.07□□□□□ -1.28
CCDC30-209ENST00000477155 ARGLU1Q9NWB6 273 aaPredicted RBP7.07□□□□□ -1.28
CCDC30-209ENST00000477155 CNTN6Q9UQ52 1028 aa7.07□□□□□ -1.28
CCDC30-209ENST00000477155 NOD1Q9Y239 953 aa7.07□□□□□ -1.28
CCDC30-209ENST00000477155 STXBP5LQ9Y2K9 1186 aa7.07□□□□□ -1.28
CCDC30-209ENST00000477155 C2CD2Q9Y426 696 aa7.07□□□□□ -1.28
CCDC30-209ENST00000477155 ANK1P16157 1881 aa7.07□□□□□ -1.28
CCDC30-209ENST00000477155 SPDYE4A6NLX3 237 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 SPOPO43791 374 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 CHRNA1P02708 482 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 CYP1A2P05177 515 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 ZNF132P52740 706 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 TNNC1P63316 161 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 UBXN11Q5T124 520 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 ARRDC4Q8NCT1 418 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 HES6Q96HZ4 224 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 HEXIM2Q96MH2 286 aaKnown RBP7.06□□□□□ -1.28
CCDC30-209ENST00000477155 ZFP42Q96MM3 310 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 SELENOOQ9BVL4 669 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 CACNG4Q9UBN1 327 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 IPPQ9Y573 584 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 SMIM28A0A1B0GU29 152 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 HMGCRP04035 888 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 HOXC8P31273 242 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 RAD23BP54727 409 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 CENPCQ03188 943 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 TMCO3Q6UWJ1 677 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 RSPH3Q86UC2 560 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 ZNF784Q8NCA9 323 aaPredicted RBP7.06□□□□□ -1.28
CCDC30-209ENST00000477155 RNF169Q8NCN4 708 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 ALG3Q92685 438 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 RPGRIP1Q96KN7 1286 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 SNX27Q96L92 541 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 GDAP1L1Q96MZ0 367 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 UPF3AQ9H1J1 476 aaKnown RBP7.06□□□□□ -1.28
CCDC30-209ENST00000477155 ZNF446Q9NWS9 450 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 DMGDHQ9UI17 866 aaKnown RBP7.06□□□□□ -1.28
CCDC30-209ENST00000477155 ITGA11Q9UKX5 1188 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 SCN1AP35498 2009 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 GHRP10912 638 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 SSR1P43307 286 aaKnown RBP7.06□□□□□ -1.28
CCDC30-209ENST00000477155 AFF1P51825 1210 aaKnown RBP7.06□□□□□ -1.28
CCDC30-209ENST00000477155 NDST1P52848 882 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 MYO1EQ12965 1108 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 ITGA7Q13683 1181 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 CYP4A22Q5TCH4 519 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 DENND1BQ6P3S1 775 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 WDTC1Q8N5D0 677 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 C12orf29Q8N999 325 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 SMG8Q8ND04 991 aaKnown RBP7.06□□□□□ -1.28
CCDC30-209ENST00000477155 WHAMMQ8TF30 809 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 LPPQ93052 612 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 PBKQ96KB5 322 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 KRT12Q99456 494 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 ELOVL4Q9GZR5 314 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 AGO3Q9H9G7 860 aaKnown RBP7.06□□□□□ -1.28
CCDC30-209ENST00000477155 DDX20Q9UHI6 824 aaKnown RBP7.06□□□□□ -1.28
CCDC30-209ENST00000477155 USTQ9Y2C2 406 aa7.06□□□□□ -1.28
CCDC30-209ENST00000477155 ATP8B3O60423 1300 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 MYO1FO00160 1098 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 PIK3R2O00459 728 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 TLR3O15455 904 aaKnown RBP7.05□□□□□ -1.28
CCDC30-209ENST00000477155 DDX3YO15523 660 aaKnown RBP7.05□□□□□ -1.28
CCDC30-209ENST00000477155 FGGP02679 453 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 ITGA4P13612 1032 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 P4HA1P13674 534 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 AXLP30530 894 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 ATICP31939 592 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 YWHAEP62258 255 aaKnown RBP7.05□□□□□ -1.28
CCDC30-209ENST00000477155 LIN9Q5TKA1 542 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 DCAF12L1Q5VU92 463 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 MON1BQ7L1V2 547 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 RNF180Q86T96 592 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 SERINC5Q86VE9 423 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 CD302Q8IX05 232 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 USP38Q8NB14 1042 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 SLC4A11Q8NBS3 891 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 KLHDC9Q8NEP7 349 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 BEST2Q8NFU1 509 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 UBA3Q8TBC4 463 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 ZNF296Q8WUU4 475 aaPredicted RBP7.05□□□□□ -1.28
CCDC30-209ENST00000477155 TMEM176AQ96HP8 235 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 BCO2Q9BYV7 579 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 PLEKHA5Q9HAU0 1116 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 UVRAGQ9P2Y5 699 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 TJP2Q9UDY2 1190 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 TRPV2Q9Y5S1 764 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 KRIT1O00522 736 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 HCRTO43612 131 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 CILPO75339 1184 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 PDGFRBP09619 1106 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 IGFBP6P24592 240 aaPredicted RBP7.05□□□□□ -1.28
CCDC30-209ENST00000477155 YY1P25490 414 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 CD52P31358 61 aa7.05□□□□□ -1.28
CCDC30-209ENST00000477155 RPL7AP62424 266 aaKnown RBP7.05□□□□□ -1.28
CCDC30-209ENST00000477155 SOX4Q06945 474 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms