RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 POLR3FQ9H1D9 316 aaPredicted RBP8□□□□□ -1.13
BRCA1-214ENST00000477152 AK5Q9Y6K8 562 aa8□□□□□ -1.13
BRCA1-214ENST00000477152 A0A1B0GUA9 196 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 ARHGEF35A5YM69 484 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 NPTXRO95502 500 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 PDGFBP01127 241 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-214ENST00000477152 ARF4P18085 180 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-214ENST00000477152 RARRES1P49788 294 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 EFNA5P52803 228 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 PFKPQ01813 784 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 MBTD1Q05BQ5 628 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 PRPF4BQ13523 1007 aaKnown RBP7.99□□□□□ -1.13
BRCA1-214ENST00000477152 CAPSQ13938 189 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 HSP90AA2PQ14568 343 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-214ENST00000477152 FAM187BQ17R55 369 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 DCAF4L1Q3SXM0 396 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 PPM1LQ5SGD2 360 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 SKAP1Q86WV1 359 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 PALB2Q86YC2 1186 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 DTWD2Q8NBA8 298 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 DEPTORQ8TB45 409 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 KCNG4Q8TDN1 519 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 BCL7CQ8WUZ0 217 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-214ENST00000477152 UROC1Q96N76 676 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 PNMA5Q96PV4 448 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 HSD17B14Q9BPX1 270 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 EIF2AQ9BY44 585 aaKnown RBP7.99□□□□□ -1.13
BRCA1-214ENST00000477152 MINDY3Q9H8M7 445 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 CHST7Q9NS84 486 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 MARCH5Q9NX47 278 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 NOL7Q9UMY1 257 aaKnown RBP7.99□□□□□ -1.13
BRCA1-214ENST00000477152 PLXNA3P51805 1871 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 PRR23AA6NEV1 266 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 USO1O60763 962 aaKnown RBP7.99□□□□□ -1.13
BRCA1-214ENST00000477152 HOXA9P31269 272 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 MAGEA9P43362 315 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 ANGPT1Q15389 498 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 UVSSAQ2YD98 709 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 RNF168Q8IYW5 571 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-214ENST00000477152 NSUN5Q96P11 429 aaKnown RBP7.99□□□□□ -1.13
BRCA1-214ENST00000477152 TTPALQ9BTX7 342 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 POLR3CQ9BUI4 534 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-214ENST00000477152 VN1R3Q9BXE9 311 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 NT5C3AQ9H0P0 336 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 TPCN1Q9ULQ1 816 aa7.99□□□□□ -1.13
BRCA1-214ENST00000477152 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-214ENST00000477152 NCAM2O15394 837 aa7.98□□□□□ -1.13
BRCA1-214ENST00000477152 TGM5O43548 720 aa7.98□□□□□ -1.13
BRCA1-214ENST00000477152 GADD45BO75293 160 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-214ENST00000477152 LAMP2P13473 410 aa7.98□□□□□ -1.13
BRCA1-214ENST00000477152 FGFR3P22607 806 aa7.98□□□□□ -1.13
BRCA1-214ENST00000477152 GLRA2P23416 452 aa7.98□□□□□ -1.13
BRCA1-214ENST00000477152 NAMPTP43490 491 aa7.98□□□□□ -1.13
BRCA1-214ENST00000477152 YARSP54577 528 aaKnown RBP7.98□□□□□ -1.13
BRCA1-214ENST00000477152 SPIRE1Q08AE8 756 aa7.98□□□□□ -1.13
BRCA1-214ENST00000477152 MEI1Q5TIA1 1274 aa7.98□□□□□ -1.13
BRCA1-214ENST00000477152 GET4Q7L5D6 327 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-214ENST00000477152 ERMP1Q7Z2K6 904 aa7.98□□□□□ -1.13
BRCA1-214ENST00000477152 DIS3L2Q8IYB7 885 aaKnown RBP7.98□□□□□ -1.13
BRCA1-214ENST00000477152 SLC44A3Q8N4M1 653 aa7.98□□□□□ -1.13
BRCA1-214ENST00000477152 OR13H1Q8NG92 308 aa7.98□□□□□ -1.13
BRCA1-214ENST00000477152 KIFAP3Q92845 792 aa7.98□□□□□ -1.13
BRCA1-214ENST00000477152 SECISBP2LQ93073 1101 aaKnown RBP7.98□□□□□ -1.13
BRCA1-214ENST00000477152 GTF3C6Q969F1 213 aa7.98□□□□□ -1.13
BRCA1-214ENST00000477152 SNX27Q96L92 541 aa7.98□□□□□ -1.13
BRCA1-214ENST00000477152 BCO2Q9BYV7 579 aa7.98□□□□□ -1.13
BRCA1-214ENST00000477152 XPNPEP1Q9NQW7 623 aa7.98□□□□□ -1.13
BRCA1-214ENST00000477152 TOPORSQ9NS56 1045 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-214ENST00000477152 WRAP73Q9P2S5 460 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-214ENST00000477152 CDH22Q9UJ99 828 aa7.98□□□□□ -1.13
BRCA1-214ENST00000477152 ACKR2O00590 384 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 PAPLNO95428 1278 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 PRKCBP05771 671 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 POU2F2P09086 479 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 AKAP5P24588 427 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 ELF1P32519 619 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 PRKCQQ04759 706 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 PSMD5Q16401 504 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 FAM171A1Q5VUB5 890 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 KANK3Q6NY19 840 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 DCLRE1AQ6PJP8 1040 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 RSPO2Q6UXX9 243 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-214ENST00000477152 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-214ENST00000477152 CEP57Q86XR8 500 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 GALNT12Q8IXK2 581 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 ASAP3Q8TDY4 903 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 NELL2Q99435 816 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 NXF3Q9H4D5 531 aaKnown RBP7.97□□□□□ -1.13
BRCA1-214ENST00000477152 SLC2A4RGQ9NR83 387 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 SLC38A7Q9NVC3 462 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 KCNH3Q9ULD8 1083 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 ATXN7L1Q9ULK2 861 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-214ENST00000477152 SIT1Q9Y3P8 196 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 KIF3AQ9Y496 699 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 HES2Q9Y543 173 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 ZDBF2Q9HCK1 2354 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 BTBD18B2RXH4 712 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 LMNAP02545 664 aaKnown RBP7.97□□□□□ -1.13
BRCA1-214ENST00000477152 OR52Z1P0C646 297 aa7.97□□□□□ -1.13
BRCA1-214ENST00000477152 CYP11B2P19099 503 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms