RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 CTNNA2P26232 953 aa24.54■■□□□ 1.52
CCDC7-206ENST00000476558 SSTR3P32745 418 aaPredicted RBP24.54■■□□□ 1.52
CCDC7-206ENST00000476558 GUCY2FP51841 1108 aa24.54■■□□□ 1.52
CCDC7-206ENST00000476558 RAD23BP54727 409 aa24.54■■□□□ 1.52
CCDC7-206ENST00000476558 RBP5P82980 135 aa24.54■■□□□ 1.52
CCDC7-206ENST00000476558 TRIM32Q13049 653 aa24.54■■□□□ 1.52
CCDC7-206ENST00000476558 ZNF394Q53GI3 561 aa24.54■■□□□ 1.52
CCDC7-206ENST00000476558 C8orf74Q6P047 294 aa24.54■■□□□ 1.52
CCDC7-206ENST00000476558 PAXIP1Q6ZW49 1069 aaPredicted RBP24.54■■□□□ 1.52
CCDC7-206ENST00000476558 UBL4BQ8N7F7 174 aa24.54■■□□□ 1.52
CCDC7-206ENST00000476558 ZMAT2Q96NC0 199 aaKnown RBP24.54■■□□□ 1.52
CCDC7-206ENST00000476558 ZNF518BQ9C0D4 1074 aa24.54■■□□□ 1.52
CCDC7-206ENST00000476558 FAM124BQ9H5Z6 455 aaPredicted RBP24.54■■□□□ 1.52
CCDC7-206ENST00000476558 AGAP1Q9UPQ3 857 aa24.54■■□□□ 1.52
CCDC7-206ENST00000476558 PAEPP09466 180 aa24.53■■□□□ 1.52
CCDC7-206ENST00000476558 CTNNA1P35221 906 aaKnown RBP24.53■■□□□ 1.52
CCDC7-206ENST00000476558 RAP1GAPP47736 663 aa24.53■■□□□ 1.52
CCDC7-206ENST00000476558 CDH8P55286 799 aa24.53■■□□□ 1.52
CCDC7-206ENST00000476558 TNNC1P63316 161 aa24.53■■□□□ 1.52
CCDC7-206ENST00000476558 C2CD6Q53TS8 623 aa24.53■■□□□ 1.52
CCDC7-206ENST00000476558 LLGL2Q6P1M3 1020 aa24.53■■□□□ 1.52
CCDC7-206ENST00000476558 TAF2Q6P1X5 1199 aa24.53■■□□□ 1.52
CCDC7-206ENST00000476558 CPNE8Q86YQ8 564 aa24.53■■□□□ 1.52
CCDC7-206ENST00000476558 WDTC1Q8N5D0 677 aa24.53■■□□□ 1.52
CCDC7-206ENST00000476558 KIF12Q96FN5 646 aa24.53■■□□□ 1.52
CCDC7-206ENST00000476558 RNPC3Q96LT9 517 aaKnown RBP24.53■■□□□ 1.52
CCDC7-206ENST00000476558 KRT12Q99456 494 aa24.53■■□□□ 1.52
CCDC7-206ENST00000476558 C11orf70Q9BRQ4 267 aa24.53■■□□□ 1.52
CCDC7-206ENST00000476558 PCDHA3Q9Y5H8 950 aa24.53■■□□□ 1.52
CCDC7-206ENST00000476558 CCDC188H7C350 402 aa24.52■■□□□ 1.52
CCDC7-206ENST00000476558 AOC2O75106 756 aa24.52■■□□□ 1.52
CCDC7-206ENST00000476558 MARCKSL1P49006 195 aa24.52■■□□□ 1.52
CCDC7-206ENST00000476558 SLC7A5Q01650 507 aa24.52■■□□□ 1.52
CCDC7-206ENST00000476558 CACNB2Q08289 660 aaPredicted RBP24.52■■□□□ 1.52
CCDC7-206ENST00000476558 MAMLD1Q13495 774 aa24.52■■□□□ 1.52
CCDC7-206ENST00000476558 LIN9Q5TKA1 542 aa24.52■■□□□ 1.52
CCDC7-206ENST00000476558 MMS22LQ6ZRQ5 1243 aa24.52■■□□□ 1.52
CCDC7-206ENST00000476558 TRIM7Q9C029 511 aa24.52■■□□□ 1.52
CCDC7-206ENST00000476558 SMYD3Q9H7B4 428 aa24.52■■□□□ 1.52
CCDC7-206ENST00000476558 GTF2IRD1Q9UHL9 959 aa24.52■■□□□ 1.52
CCDC7-206ENST00000476558 ANAPC7Q9UJX3 599 aa24.52■■□□□ 1.52
CCDC7-206ENST00000476558 PCNTO95613 3336 aa24.52■■□□□ 1.52
CCDC7-206ENST00000476558 ADAMTS4O75173 837 aa24.51■■□□□ 1.51
CCDC7-206ENST00000476558 CILPO75339 1184 aa24.51■■□□□ 1.51
CCDC7-206ENST00000476558 PGK1P00558 417 aa24.51■■□□□ 1.51
CCDC7-206ENST00000476558 MYBL2P10244 700 aa24.51■■□□□ 1.51
CCDC7-206ENST00000476558 TNFRSF8P28908 595 aa24.51■■□□□ 1.51
CCDC7-206ENST00000476558 MRPS25P82663 173 aaKnown RBP24.51■■□□□ 1.51
CCDC7-206ENST00000476558 UBXN11Q5T124 520 aa24.51■■□□□ 1.51
CCDC7-206ENST00000476558 CNTN3Q9P232 1028 aa24.51■■□□□ 1.51
CCDC7-206ENST00000476558 PDCD11Q14690 1871 aaKnown RBP24.51■■□□□ 1.51
CCDC7-206ENST00000476558 CCDC66A2RUB6 948 aa24.51■■□□□ 1.51
CCDC7-206ENST00000476558 FGGP02679 453 aa24.51■■□□□ 1.51
CCDC7-206ENST00000476558 P4HA1P13674 534 aa24.51■■□□□ 1.51
CCDC7-206ENST00000476558 NBPF20Q3BBV1 942 aa24.51■■□□□ 1.51
CCDC7-206ENST00000476558 CXCL17Q6UXB2 119 aa24.51■■□□□ 1.51
CCDC7-206ENST00000476558 SLC4A11Q8NBS3 891 aa24.51■■□□□ 1.51
CCDC7-206ENST00000476558 AP1M1Q9BXS5 423 aa24.51■■□□□ 1.51
CCDC7-206ENST00000476558 LHX5Q9H2C1 402 aa24.51■■□□□ 1.51
CCDC7-206ENST00000476558 NXF3Q9H4D5 531 aaKnown RBP24.51■■□□□ 1.51
CCDC7-206ENST00000476558 HES2Q9Y543 173 aa24.51■■□□□ 1.51
CCDC7-206ENST00000476558 TCRBV5S1A1TA0A578 114 aa24.5■■□□□ 1.51
CCDC7-206ENST00000476558 SPDYE4A6NLX3 237 aa24.5■■□□□ 1.51
CCDC7-206ENST00000476558 KRIT1O00522 736 aa24.5■■□□□ 1.51
CCDC7-206ENST00000476558 GLI1P08151 1106 aa24.5■■□□□ 1.51
CCDC7-206ENST00000476558 ITGA4P13612 1032 aa24.5■■□□□ 1.51
CCDC7-206ENST00000476558 INCA1Q0VD86 236 aa24.5■■□□□ 1.51
CCDC7-206ENST00000476558 CLUL1Q15846 466 aa24.5■■□□□ 1.51
CCDC7-206ENST00000476558 XKR4Q5GH76 650 aa24.5■■□□□ 1.51
CCDC7-206ENST00000476558 REM2Q8IYK8 340 aaPredicted RBP24.5■■□□□ 1.51
CCDC7-206ENST00000476558 TMEM35BQ8NCS4 154 aa24.5■■□□□ 1.51
CCDC7-206ENST00000476558 TWNKQ96RR1 684 aa24.5■■□□□ 1.51
CCDC7-206ENST00000476558 CELF4Q9BZC1 486 aaKnown RBP24.5■■□□□ 1.51
CCDC7-206ENST00000476558 MRPL47Q9HD33 250 aaKnown RBP24.5■■□□□ 1.51
CCDC7-206ENST00000476558 GDF3Q9NR23 364 aa24.5■■□□□ 1.51
CCDC7-206ENST00000476558 PIN4Q9Y237 131 aaKnown RBP24.5■■□□□ 1.51
CCDC7-206ENST00000476558 SPOPO43791 374 aa24.49■■□□□ 1.51
CCDC7-206ENST00000476558 RARBP10826 455 aa24.49■■□□□ 1.51
CCDC7-206ENST00000476558 YARSP54577 528 aaKnown RBP24.49■■□□□ 1.51
CCDC7-206ENST00000476558 PHLDB2Q86SQ0 1253 aa24.49■■□□□ 1.51
CCDC7-206ENST00000476558 NAP1L3Q99457 506 aaPredicted RBP24.49■■□□□ 1.51
CCDC7-206ENST00000476558 ELOVL4Q9GZR5 314 aa24.49■■□□□ 1.51
CCDC7-206ENST00000476558 SPC25Q9HBM1 224 aa24.49■■□□□ 1.51
CCDC7-206ENST00000476558 SCINQ9Y6U3 715 aa24.49■■□□□ 1.51
CCDC7-206ENST00000476558 BHMG1C9JSJ3 638 aaPredicted RBP24.49■■□□□ 1.51
CCDC7-206ENST00000476558 RAD51CO43502 376 aa24.49■■□□□ 1.51
CCDC7-206ENST00000476558 RECQL4O94761 1208 aa24.49■■□□□ 1.51
CCDC7-206ENST00000476558 TOMM70O94826 608 aa24.49■■□□□ 1.51
CCDC7-206ENST00000476558 SLC1A1P43005 524 aa24.49■■□□□ 1.51
CCDC7-206ENST00000476558 PLA2G4AP47712 749 aa24.49■■□□□ 1.51
CCDC7-206ENST00000476558 SP3Q02447 781 aa24.49■■□□□ 1.51
CCDC7-206ENST00000476558 ZNF211Q13398 564 aaPredicted RBP24.49■■□□□ 1.51
CCDC7-206ENST00000476558 MAP9Q49MG5 647 aa24.49■■□□□ 1.51
CCDC7-206ENST00000476558 HDXQ7Z353 690 aa24.49■■□□□ 1.51
CCDC7-206ENST00000476558 C1orf131Q8NDD1 294 aaKnown RBP24.49■■□□□ 1.51
CCDC7-206ENST00000476558 CFHR5Q9BXR6 569 aa24.49■■□□□ 1.51
CCDC7-206ENST00000476558 RNF186Q9NXI6 227 aa24.49■■□□□ 1.51
CCDC7-206ENST00000476558 HMGXB4Q9UGU5 601 aa24.49■■□□□ 1.51
CCDC7-206ENST00000476558 MYO1FO00160 1098 aa24.48■■□□□ 1.51
CCDC7-206ENST00000476558 SART1O43290 800 aaKnown RBP24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms