RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 SPTLC1O15269 473 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 TSPAN3O60637 253 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 MT-ND3P03897 115 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 ADORA2BP29275 332 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 COILP38432 576 aaPredicted RBP5.27□□□□□ -1.57
CCDC39-204ENST00000476379 CASP2P42575 452 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 ALDH5A1P51649 535 aaPredicted RBP5.27□□□□□ -1.57
CCDC39-204ENST00000476379 SLC12A3P55017 1021 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 GAD2Q05329 585 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 EPHA7Q15375 998 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 TAF1CQ15572 869 aaPredicted RBP5.27□□□□□ -1.57
CCDC39-204ENST00000476379 PKN2Q16513 984 aaKnown RBP5.27□□□□□ -1.57
CCDC39-204ENST00000476379 GRAMD1BQ3KR37 738 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 TMEM259Q4ZIN3 620 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 PAN2Q504Q3 1202 aaKnown RBP5.27□□□□□ -1.57
CCDC39-204ENST00000476379 KRT39Q6A163 491 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 SV2AQ7L0J3 742 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 FRMD5Q7Z6J6 570 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 SLC13A5Q86YT5 568 aaPredicted RBP5.27□□□□□ -1.57
CCDC39-204ENST00000476379 RYBPQ8N488 228 aaPredicted RBP5.27□□□□□ -1.57
CCDC39-204ENST00000476379 KCTD17Q8N5Z5 321 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 FBXL13Q8NEE6 735 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 KLRG1Q96E93 195 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 FAM111AQ96PZ2 611 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 POLR3CQ9BUI4 534 aaPredicted RBP5.27□□□□□ -1.57
CCDC39-204ENST00000476379 MTMR12Q9C0I1 747 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 VPS11Q9H270 941 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 PSD3Q9NYI0 1048 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 FBXO40Q9UH90 709 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 NEU2Q9Y3R4 380 aa5.27□□□□□ -1.57
CCDC39-204ENST00000476379 LY75O60449 1722 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 GRIN2DO15399 1336 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 COL5A3P25940 1745 aaPredicted RBP5.26□□□□□ -1.57
CCDC39-204ENST00000476379 IQCA1LA6NCM1 817 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 TULP2O00295 520 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 CST8O60676 142 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 FOSP01100 380 aaPredicted RBP5.26□□□□□ -1.57
CCDC39-204ENST00000476379 CYP11B1P15538 503 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 RASSF2P50749 326 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 PSMC1P62191 440 aaKnown RBP5.26□□□□□ -1.57
CCDC39-204ENST00000476379 ITIH3Q06033 890 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 PEX6Q13608 980 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 ALCAMQ13740 583 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 PDE1CQ14123 709 aaPredicted RBP5.26□□□□□ -1.57
CCDC39-204ENST00000476379 ANKRD20A8PQ5CZ79 823 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 KDM7AQ6ZMT4 941 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 FUKQ8N0W3 1084 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 PRELID2Q8N945 189 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 USP33Q8TEY7 942 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 AGAP11Q8TF27 550 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 FAF2Q96CS3 445 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 ACAP3Q96P50 834 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 PGLYRP2Q96PD5 576 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 OSBPL8Q9BZF1 889 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 GANQ9H2C0 597 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 IFT122Q9HBG6 1241 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 PCMTD2Q9NV79 361 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 UBP1Q9NZI7 540 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 ZFP69BQ9UJL9 534 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 EXOC7Q9UPT5 735 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 V9GYQ6 96 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 PAPPAQ13219 1627 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 MYH7P12883 1935 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 MYO18AQ92614 2054 aaKnown RBP5.26□□□□□ -1.57
CCDC39-204ENST00000476379 H3BRJ5 948 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 GYG2O15488 501 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 HLA-DRAP01903 254 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 ASNSP08243 561 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 ESRRAP11474 423 aaPredicted RBP5.26□□□□□ -1.57
CCDC39-204ENST00000476379 GMPRP36959 345 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 CDH6P55285 790 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 SUPT20HL1Q3ZLR7 823 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 C6orf118Q5T5N4 469 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 FAM102AQ5T9C2 384 aaPredicted RBP5.26□□□□□ -1.57
CCDC39-204ENST00000476379 NPNTQ6UXI9 565 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 C3orf62Q6ZUJ4 267 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 ZNF720Q7Z2F6 126 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 POLNQ7Z5Q5 900 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 MTDHQ86UE4 582 aaKnown RBP5.26□□□□□ -1.57
CCDC39-204ENST00000476379 GLIS1Q8NBF1 620 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 ZNF280CQ8ND82 737 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 GSDMBQ8TAX9 411 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 TMC2Q8TDI7 906 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 PGBD4Q96DM1 585 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 ZSWIM1Q9BR11 485 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 PABPC3Q9H361 631 aaKnown RBP5.26□□□□□ -1.57
CCDC39-204ENST00000476379 FBXO6Q9NRD1 293 aaPredicted RBP5.26□□□□□ -1.57
CCDC39-204ENST00000476379 DNPEPQ9ULA0 475 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 UMODL1Q5DID0 1318 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 SYNGAP1Q96PV0 1343 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 A0A1W2PPM1 405 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 M0QYV0 167 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 ATP9BO43861 1147 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 PHF2O75151 1096 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 USP12O75317 370 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 IREB2P48200 963 aaKnown RBP5.26□□□□□ -1.57
CCDC39-204ENST00000476379 PGGT1BP53609 377 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 RCAN1P53805 252 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 PLIN5Q00G26 463 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 NME3Q13232 169 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms