RNA–Protein interactions for RNA: ENST00000476086.6

NR1H3-219, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-219ENST00000476086 C3orf58Q8NDZ4 430 aa20.32■□□□□ 0.84
NR1H3-219ENST00000476086 SPATA18Q8TC71 538 aa20.32■□□□□ 0.84
NR1H3-219ENST00000476086 SHC3Q92529 594 aa20.32■□□□□ 0.84
NR1H3-219ENST00000476086 BAP1Q92560 729 aa20.32■□□□□ 0.84
NR1H3-219ENST00000476086 RABGGTAQ92696 567 aa20.32■□□□□ 0.84
NR1H3-219ENST00000476086 SYN2Q92777 582 aaPredicted RBP20.32■□□□□ 0.84
NR1H3-219ENST00000476086 SUSD3Q96L08 255 aa20.32■□□□□ 0.84
NR1H3-219ENST00000476086 SENP8Q96LD8 212 aa20.32■□□□□ 0.84
NR1H3-219ENST00000476086 KREMEN1Q96MU8 473 aa20.32■□□□□ 0.84
NR1H3-219ENST00000476086 STK39Q9UEW8 545 aa20.32■□□□□ 0.84
NR1H3-219ENST00000476086 POLIQ9UNA4 740 aa20.32■□□□□ 0.84
NR1H3-219ENST00000476086 RWDD3Q9Y3V2 267 aa20.32■□□□□ 0.84
NR1H3-219ENST00000476086 PCDHB12Q9Y5F1 795 aa20.32■□□□□ 0.84
NR1H3-219ENST00000476086 SF3B1O75533 1304 aaKnown RBP eCLIP20.31■□□□□ 0.84
NR1H3-219ENST00000476086 NLRC5Q86WI3 1866 aa20.31■□□□□ 0.84
NR1H3-219ENST00000476086 SPTLC1O15269 473 aa20.31■□□□□ 0.84
NR1H3-219ENST00000476086 TACC1O75410 805 aa20.31■□□□□ 0.84
NR1H3-219ENST00000476086 SOX5P35711 763 aa20.31■□□□□ 0.84
NR1H3-219ENST00000476086 PPM1AP35813 382 aa20.31■□□□□ 0.84
NR1H3-219ENST00000476086 SFMBT2Q5VUG0 894 aa20.31■□□□□ 0.84
NR1H3-219ENST00000476086 PDXDC1Q6P996 788 aa20.31■□□□□ 0.84
NR1H3-219ENST00000476086 KCNT2Q6UVM3 1135 aa20.31■□□□□ 0.84
NR1H3-219ENST00000476086 METTL23Q86XA0 190 aa20.31■□□□□ 0.84
NR1H3-219ENST00000476086 SP7Q8TDD2 431 aaPredicted RBP20.31■□□□□ 0.84
NR1H3-219ENST00000476086 ELMO3Q96BJ8 720 aa20.31■□□□□ 0.84
NR1H3-219ENST00000476086 CISHQ9NSE2 258 aa20.31■□□□□ 0.84
NR1H3-219ENST00000476086 MRPL42Q9Y6G3 142 aaKnown RBP20.31■□□□□ 0.84
NR1H3-219ENST00000476086 LRRC53A6NM62 1247 aa20.3■□□□□ 0.84
NR1H3-219ENST00000476086 M0QZQ0 153 aa20.3■□□□□ 0.84
NR1H3-219ENST00000476086 NRDCO43847 1150 aa20.3■□□□□ 0.84
NR1H3-219ENST00000476086 WEE2P0C1S8 567 aa20.3■□□□□ 0.84
NR1H3-219ENST00000476086 FERP16591 822 aa20.3■□□□□ 0.84
NR1H3-219ENST00000476086 USP8P40818 1118 aa20.3■□□□□ 0.84
NR1H3-219ENST00000476086 ADKP55263 362 aaKnown RBP20.3■□□□□ 0.84
NR1H3-219ENST00000476086 BPIFB4P59827 614 aa20.3■□□□□ 0.84
NR1H3-219ENST00000476086 ARID5BQ14865 1188 aa20.3■□□□□ 0.84
NR1H3-219ENST00000476086 SOWAHAQ2M3V2 549 aa20.3■□□□□ 0.84
NR1H3-219ENST00000476086 TIGD5Q53EQ6 642 aa20.3■□□□□ 0.84
NR1H3-219ENST00000476086 COLGALT1Q8NBJ5 622 aa20.3■□□□□ 0.84
NR1H3-219ENST00000476086 HASPINQ8TF76 798 aa20.3■□□□□ 0.84
NR1H3-219ENST00000476086 KAT5Q92993 513 aa20.3■□□□□ 0.84
NR1H3-219ENST00000476086 PANX2Q96RD6 677 aa20.3■□□□□ 0.84
NR1H3-219ENST00000476086 DNAJC7Q99615 494 aa20.3■□□□□ 0.84
NR1H3-219ENST00000476086 ARID3AQ99856 593 aa20.3■□□□□ 0.84
NR1H3-219ENST00000476086 SNX25Q9H3E2 840 aa20.3■□□□□ 0.84
NR1H3-219ENST00000476086 SMYD3Q9H7B4 428 aa20.3■□□□□ 0.84
NR1H3-219ENST00000476086 ABHD10Q9NUJ1 306 aa20.3■□□□□ 0.84
NR1H3-219ENST00000476086 SPG21Q9NZD8 308 aa20.3■□□□□ 0.84
NR1H3-219ENST00000476086 AIPL1Q9NZN9 384 aa20.3■□□□□ 0.84
NR1H3-219ENST00000476086 AJAP1Q9UKB5 411 aaPredicted RBP20.3■□□□□ 0.84
NR1H3-219ENST00000476086 PCDHB4Q9Y5E5 795 aa20.3■□□□□ 0.84
NR1H3-219ENST00000476086 GBF1Q92538 1859 aa20.3■□□□□ 0.84
NR1H3-219ENST00000476086 FOXN3O00409 490 aaPredicted RBP20.29■□□□□ 0.84
NR1H3-219ENST00000476086 SYN3O14994 580 aa20.29■□□□□ 0.84
NR1H3-219ENST00000476086 KRT5P13647 590 aa20.29■□□□□ 0.84
NR1H3-219ENST00000476086 TYMPP19971 482 aa20.29■□□□□ 0.84
NR1H3-219ENST00000476086 LHX1P48742 406 aa20.29■□□□□ 0.84
NR1H3-219ENST00000476086 INCA1Q0VD86 236 aa20.29■□□□□ 0.84
NR1H3-219ENST00000476086 CCDC186Q7Z3E2 898 aa20.29■□□□□ 0.84
NR1H3-219ENST00000476086 LIMS2Q7Z4I7 341 aa20.29■□□□□ 0.84
NR1H3-219ENST00000476086 UNC93AQ86WB7 457 aa20.29■□□□□ 0.84
NR1H3-219ENST00000476086 FAM71AQ8IYT1 594 aa20.29■□□□□ 0.84
NR1H3-219ENST00000476086 ADGRF2Q8IZF7 708 aa20.29■□□□□ 0.84
NR1H3-219ENST00000476086 TC2NQ8N9U0 490 aa20.29■□□□□ 0.84
NR1H3-219ENST00000476086 CLP1Q92989 425 aaKnown RBP20.29■□□□□ 0.84
NR1H3-219ENST00000476086 TMEM169Q96HH4 297 aa20.29■□□□□ 0.84
NR1H3-219ENST00000476086 HCSTQ9UBK5 93 aa20.29■□□□□ 0.84
NR1H3-219ENST00000476086 BARX2Q9UMQ3 279 aaPredicted RBP20.29■□□□□ 0.84
NR1H3-219ENST00000476086 PCDHB8Q9UN66 801 aa20.29■□□□□ 0.84
NR1H3-219ENST00000476086 CNTN6Q9UQ52 1028 aa20.29■□□□□ 0.84
NR1H3-219ENST00000476086 PCDHA11Q9Y5I1 949 aa20.29■□□□□ 0.84
NR1H3-219ENST00000476086 BZW2Q9Y6E2 419 aaKnown RBP20.29■□□□□ 0.84
NR1H3-219ENST00000476086 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.28■□□□□ 0.84
NR1H3-219ENST00000476086 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.28■□□□□ 0.84
NR1H3-219ENST00000476086 CAPN15O75808 1086 aa20.28■□□□□ 0.84
NR1H3-219ENST00000476086 CYP11A1P05108 521 aa20.28■□□□□ 0.84
NR1H3-219ENST00000476086 CD58P19256 250 aa20.28■□□□□ 0.84
NR1H3-219ENST00000476086 WARSP23381 471 aaKnown RBP20.28■□□□□ 0.84
NR1H3-219ENST00000476086 HNRNPH3P31942 346 aaKnown RBP20.28■□□□□ 0.84
NR1H3-219ENST00000476086 BRCC3P46736 316 aa20.28■□□□□ 0.84
NR1H3-219ENST00000476086 CDH8P55286 799 aa20.28■□□□□ 0.84
NR1H3-219ENST00000476086 ASIC2Q16515 512 aa20.28■□□□□ 0.84
NR1H3-219ENST00000476086 FUT10Q6P4F1 479 aa20.28■□□□□ 0.84
NR1H3-219ENST00000476086 TMEM270Q6UE05 265 aa20.28■□□□□ 0.84
NR1H3-219ENST00000476086 CD300LGQ6UXG3 332 aa20.28■□□□□ 0.84
NR1H3-219ENST00000476086 PDCL2Q8N4E4 241 aa20.28■□□□□ 0.84
NR1H3-219ENST00000476086 IGSF21Q96ID5 467 aa20.28■□□□□ 0.84
NR1H3-219ENST00000476086 MARCH5Q9NX47 278 aa20.28■□□□□ 0.84
NR1H3-219ENST00000476086 L1RE1Q9UN81 338 aa20.28■□□□□ 0.84
NR1H3-219ENST00000476086 TSC2P49815 1807 aa20.27■□□□□ 0.84
NR1H3-219ENST00000476086 NT5C1B-RDH14C9J2C7 533 aa20.27■□□□□ 0.84
NR1H3-219ENST00000476086 RNF225M0QZC1 329 aaPredicted RBP20.27■□□□□ 0.84
NR1H3-219ENST00000476086 CILPO75339 1184 aa20.27■□□□□ 0.84
NR1H3-219ENST00000476086 GFPT2O94808 682 aa20.27■□□□□ 0.84
NR1H3-219ENST00000476086 ITGB1P05556 798 aa20.27■□□□□ 0.84
NR1H3-219ENST00000476086 ACO1P21399 889 aaKnown RBP20.27■□□□□ 0.84
NR1H3-219ENST00000476086 GNL1P36915 607 aaPredicted RBP20.27■□□□□ 0.84
NR1H3-219ENST00000476086 RAP1GAPP47736 663 aa20.27■□□□□ 0.84
NR1H3-219ENST00000476086 MLLT1Q03111 559 aaPredicted RBP20.27■□□□□ 0.84
NR1H3-219ENST00000476086 KRT17Q04695 432 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms