RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 RPL9P32969 192 aaKnown RBP15.27■□□□□ 0.04
FAM3A-218ENST00000475657 SOX4Q06945 474 aaPredicted RBP15.27■□□□□ 0.04
FAM3A-218ENST00000475657 GRSF1Q12849 480 aaKnown RBP eCLIP15.27■□□□□ 0.04
FAM3A-218ENST00000475657 NR5A1Q13285 461 aa15.27■□□□□ 0.04
FAM3A-218ENST00000475657 POTEDQ86YR6 584 aa15.27■□□□□ 0.04
FAM3A-218ENST00000475657 HSCBQ8IWL3 235 aa15.27■□□□□ 0.04
FAM3A-218ENST00000475657 APPL2Q8NEU8 664 aa15.27■□□□□ 0.04
FAM3A-218ENST00000475657 TTC8Q8TAM2 541 aa15.27■□□□□ 0.04
FAM3A-218ENST00000475657 ZFYVE19Q96K21 471 aa15.27■□□□□ 0.04
FAM3A-218ENST00000475657 SUSD3Q96L08 255 aa15.27■□□□□ 0.04
FAM3A-218ENST00000475657 OXCT2Q9BYC2 517 aaPredicted RBP15.27■□□□□ 0.04
FAM3A-218ENST00000475657 TOPORSQ9NS56 1045 aaPredicted RBP15.27■□□□□ 0.04
FAM3A-218ENST00000475657 EBF1Q9UH73 591 aa15.27■□□□□ 0.04
FAM3A-218ENST00000475657 LIMCH1Q9UPQ0 1083 aa15.27■□□□□ 0.04
FAM3A-218ENST00000475657 YIPF1Q9Y548 306 aa15.27■□□□□ 0.04
FAM3A-218ENST00000475657 FAM221BA6H8Z2 402 aa15.26■□□□□ 0.03
FAM3A-218ENST00000475657 TRDMT1O14717 391 aaKnown RBP15.26■□□□□ 0.03
FAM3A-218ENST00000475657 USO1O60763 962 aaKnown RBP15.26■□□□□ 0.03
FAM3A-218ENST00000475657 LARGE1O95461 756 aa15.26■□□□□ 0.03
FAM3A-218ENST00000475657 FGF19O95750 216 aa15.26■□□□□ 0.03
FAM3A-218ENST00000475657 NAMPTP43490 491 aa15.26■□□□□ 0.03
FAM3A-218ENST00000475657 CACNB1Q02641 598 aaPredicted RBP15.26■□□□□ 0.03
FAM3A-218ENST00000475657 FSTL4Q6MZW2 842 aa15.26■□□□□ 0.03
FAM3A-218ENST00000475657 C11orf74Q86VG3 221 aa15.26■□□□□ 0.03
FAM3A-218ENST00000475657 BPIFB1Q8TDL5 484 aa15.26■□□□□ 0.03
FAM3A-218ENST00000475657 PIGOQ8TEQ8 1089 aa15.26■□□□□ 0.03
FAM3A-218ENST00000475657 ZSCAN31Q96LW9 406 aaPredicted RBP15.26■□□□□ 0.03
FAM3A-218ENST00000475657 THG1LQ9NWX6 298 aaKnown RBP15.26■□□□□ 0.03
FAM3A-218ENST00000475657 PCDHA12Q9UN75 941 aa15.26■□□□□ 0.03
FAM3A-218ENST00000475657 ASB3Q9Y575 518 aa15.26■□□□□ 0.03
FAM3A-218ENST00000475657 NUB1Q9Y5A7 615 aa15.26■□□□□ 0.03
FAM3A-218ENST00000475657 SMG1Q96Q15 3661 aaKnown RBP15.26■□□□□ 0.03
FAM3A-218ENST00000475657 FREM2Q5SZK8 3169 aa15.25■□□□□ 0.03
FAM3A-218ENST00000475657 A0A087WWV3 80 aa15.25■□□□□ 0.03
FAM3A-218ENST00000475657 K7ELQ4 463 aaPredicted RBP15.25■□□□□ 0.03
FAM3A-218ENST00000475657 FDPSP14324 419 aaKnown RBP15.25■□□□□ 0.03
FAM3A-218ENST00000475657 KCNE1P15382 129 aa15.25■□□□□ 0.03
FAM3A-218ENST00000475657 XBP1P17861 261 aa15.25■□□□□ 0.03
FAM3A-218ENST00000475657 EFNA5P52803 228 aa15.25■□□□□ 0.03
FAM3A-218ENST00000475657 YARSP54577 528 aaKnown RBP15.25■□□□□ 0.03
FAM3A-218ENST00000475657 EPHB3P54753 998 aa15.25■□□□□ 0.03
FAM3A-218ENST00000475657 TNK2Q07912 1038 aa15.25■□□□□ 0.03
FAM3A-218ENST00000475657 BECN1Q14457 450 aa15.25■□□□□ 0.03
FAM3A-218ENST00000475657 SOWAHCQ53LP3 525 aaPredicted RBP15.25■□□□□ 0.03
FAM3A-218ENST00000475657 RNF19BQ6ZMZ0 732 aa15.25■□□□□ 0.03
FAM3A-218ENST00000475657 MAEAQ7L5Y9 396 aa15.25■□□□□ 0.03
FAM3A-218ENST00000475657 DNAJC25Q9H1X3 360 aa15.25■□□□□ 0.03
FAM3A-218ENST00000475657 USP20Q9Y2K6 914 aa15.25■□□□□ 0.03
FAM3A-218ENST00000475657 ASCC3Q8N3C0 2202 aaKnown RBP15.25■□□□□ 0.03
FAM3A-218ENST00000475657 STK36Q9NRP7 1315 aa15.24■□□□□ 0.03
FAM3A-218ENST00000475657 OAZ2O95190 189 aa15.24■□□□□ 0.03
FAM3A-218ENST00000475657 APBB3O95704 486 aa15.24■□□□□ 0.03
FAM3A-218ENST00000475657 CAPNS1P04632 268 aa15.24■□□□□ 0.03
FAM3A-218ENST00000475657 EDN1P05305 212 aa15.24■□□□□ 0.03
FAM3A-218ENST00000475657 CPB1P15086 417 aa15.24■□□□□ 0.03
FAM3A-218ENST00000475657 ATP2B1P20020 1258 aa15.24■□□□□ 0.03
FAM3A-218ENST00000475657 GRM5P41594 1212 aa15.24■□□□□ 0.03
FAM3A-218ENST00000475657 AMPD2Q01433 879 aa15.24■□□□□ 0.03
FAM3A-218ENST00000475657 PPP2R5AQ15172 486 aa15.24■□□□□ 0.03
FAM3A-218ENST00000475657 ME3Q16798 604 aa15.24■□□□□ 0.03
FAM3A-218ENST00000475657 FBXO43Q4G163 708 aa15.24■□□□□ 0.03
FAM3A-218ENST00000475657 STXBP5Q5T5C0 1151 aa15.24■□□□□ 0.03
FAM3A-218ENST00000475657 ATF7IP2Q5U623 682 aa15.24■□□□□ 0.03
FAM3A-218ENST00000475657 GAREM2Q75VX8 874 aa15.24■□□□□ 0.03
FAM3A-218ENST00000475657 SYT13Q7L8C5 426 aa15.24■□□□□ 0.03
FAM3A-218ENST00000475657 PROSER1Q86XN7 944 aa15.24■□□□□ 0.03
FAM3A-218ENST00000475657 DEPTORQ8TB45 409 aa15.24■□□□□ 0.03
FAM3A-218ENST00000475657 BSNDQ8WZ55 320 aa15.24■□□□□ 0.03
FAM3A-218ENST00000475657 DDX12PQ92771 950 aa15.24■□□□□ 0.03
FAM3A-218ENST00000475657 FAM83CQ9BQN1 747 aa15.24■□□□□ 0.03
FAM3A-218ENST00000475657 CCDC94Q9BW85 323 aaPredicted RBP15.24■□□□□ 0.03
FAM3A-218ENST00000475657 TNFSF13BQ9Y275 285 aa15.24■□□□□ 0.03
FAM3A-218ENST00000475657 LAMA5O15230 3695 aa15.24■□□□□ 0.03
FAM3A-218ENST00000475657 WNT7AO00755 349 aa15.23■□□□□ 0.03
FAM3A-218ENST00000475657 HYAL3O43820 417 aaPredicted RBP15.23■□□□□ 0.03
FAM3A-218ENST00000475657 RNF40O75150 1001 aa15.23■□□□□ 0.03
FAM3A-218ENST00000475657 VNN2O95498 520 aa15.23■□□□□ 0.03
FAM3A-218ENST00000475657 DRD1P21728 446 aa15.23■□□□□ 0.03
FAM3A-218ENST00000475657 KRT2P35908 639 aa15.23■□□□□ 0.03
FAM3A-218ENST00000475657 ARHGAP15Q53QZ3 475 aa15.23■□□□□ 0.03
FAM3A-218ENST00000475657 GPR158Q5T848 1215 aa15.23■□□□□ 0.03
FAM3A-218ENST00000475657 NT5DC1Q5TFE4 455 aa15.23■□□□□ 0.03
FAM3A-218ENST00000475657 PMS2CLQ68D20 193 aa15.23■□□□□ 0.03
FAM3A-218ENST00000475657 DNAJB7Q7Z6W7 309 aaPredicted RBP15.23■□□□□ 0.03
FAM3A-218ENST00000475657 GPIHBP1Q8IV16 184 aa15.23■□□□□ 0.03
FAM3A-218ENST00000475657 DEFB124Q8NES8 71 aa15.23■□□□□ 0.03
FAM3A-218ENST00000475657 PSMG2Q969U7 264 aa15.23■□□□□ 0.03
FAM3A-218ENST00000475657 TMX3Q96JJ7 454 aa15.23■□□□□ 0.03
FAM3A-218ENST00000475657 ZMAT2Q96NC0 199 aaKnown RBP15.23■□□□□ 0.03
FAM3A-218ENST00000475657 ATXN3LQ9H3M9 355 aa15.23■□□□□ 0.03
FAM3A-218ENST00000475657 SLC32A1Q9H598 525 aa15.23■□□□□ 0.03
FAM3A-218ENST00000475657 TASP1Q9H6P5 420 aa15.23■□□□□ 0.03
FAM3A-218ENST00000475657 ZMYM5Q9UJ78 669 aa15.23■□□□□ 0.03
FAM3A-218ENST00000475657 PCDHB8Q9UN66 801 aa15.23■□□□□ 0.03
FAM3A-218ENST00000475657 GPSM3Q9Y4H4 160 aa15.23■□□□□ 0.03
FAM3A-218ENST00000475657 EML5Q05BV3 1969 aa15.23■□□□□ 0.03
FAM3A-218ENST00000475657 LOC400499M0QZD8 3231 aa15.22■□□□□ 0.03
FAM3A-218ENST00000475657 UPK3BL1B0FP48 263 aa15.22■□□□□ 0.03
FAM3A-218ENST00000475657 UPK3BL2E5RIL1 263 aa15.22■□□□□ 0.03
FAM3A-218ENST00000475657 H0Y626 953 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms