RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 DYMQ7RTS9 669 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 SFR1Q86XK3 245 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 CXorf38Q8TB03 319 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 SHKBP1Q8TBC3 707 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 ZSCAN18Q8TBC5 510 aaPredicted RBP7.62□□□□□ -1.19
HDAC3-207ENST00000475549 FAM212AQ96EL1 285 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 FAM84AQ96KN4 292 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 SENP8Q96LD8 212 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 ZNF512Q96ME7 567 aaPredicted RBP7.62□□□□□ -1.19
HDAC3-207ENST00000475549 TSPAN18Q96SJ8 248 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 PANK2Q9BZ23 570 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 OSBPL6Q9BZF3 934 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 TRPV4Q9HBA0 871 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 ZFP14Q9HCL3 533 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 ZNF334Q9HCZ1 680 aaPredicted RBP7.62□□□□□ -1.19
HDAC3-207ENST00000475549 YIPF1Q9Y548 306 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 SRPRBQ9Y5M8 271 aaKnown RBP7.62□□□□□ -1.19
HDAC3-207ENST00000475549 NOTCH4Q99466 2003 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 TDRD15B5MCY1 1934 aaKnown RBP7.62□□□□□ -1.19
HDAC3-207ENST00000475549 DOCK8Q8NF50 2099 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 GPR179Q6PRD1 2367 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 DOCK6Q96HP0 2047 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 A0A1W2PRU2 124 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 MTMR11A4FU01 709 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 VPS37CA5D8V6 355 aaPredicted RBP7.61□□□□□ -1.19
HDAC3-207ENST00000475549 OR6C75A6NL08 312 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 ZNF197O14709 1029 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 TBCAO75347 108 aaKnown RBP7.61□□□□□ -1.19
HDAC3-207ENST00000475549 LMNAP02545 664 aaKnown RBP7.61□□□□□ -1.19
HDAC3-207ENST00000475549 CYP11A1P05108 521 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 KRT18P05783 430 aaKnown RBP7.61□□□□□ -1.19
HDAC3-207ENST00000475549 PSMC3P17980 439 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 SCP2P22307 547 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 RFX1P22670 979 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 MTAPQ13126 283 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 MYBPC2Q14324 1141 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 SLC39A14Q15043 492 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 KYAT1Q16773 422 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 WDR44Q5JSH3 913 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 WSCD1Q658N2 575 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 ADALQ6DHV7 355 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 OVOS1Q6IE37 1185 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 IQCEQ6IPM2 695 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 TSSK4Q6SA08 328 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 DSTYKQ6XUX3 929 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 TPRG1Q6ZUI0 275 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 DNAJB7Q7Z6W7 309 aaPredicted RBP7.61□□□□□ -1.19
HDAC3-207ENST00000475549 CD302Q8IX05 232 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 EFCAB13Q8IY85 973 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 DCLK2Q8N568 766 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 SUMF1Q8NBK3 374 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 GLIS3Q8NEA6 775 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 NELL1Q92832 810 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 SMARCD2Q92925 531 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 USP28Q96RU2 1077 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 LPIN3Q9BQK8 851 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 TRMT61BQ9BVS5 477 aaKnown RBP7.61□□□□□ -1.19
HDAC3-207ENST00000475549 ZCWPW1Q9H0M4 648 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 ASB7Q9H672 318 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 UPF2Q9HAU5 1272 aaKnown RBP7.61□□□□□ -1.19
HDAC3-207ENST00000475549 TRPV5Q9NQA5 729 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 DPP3Q9NY33 737 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 TBC1D7Q9P0N9 293 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 AGO2Q9UKV8 859 aaKnown RBP7.61□□□□□ -1.19
HDAC3-207ENST00000475549 MTMR6Q9Y217 621 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 DERAQ9Y315 318 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 C2CD2Q9Y426 696 aa7.61□□□□□ -1.19
HDAC3-207ENST00000475549 EP300Q09472 2414 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-207ENST00000475549 SPTBN4Q9H254 2564 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 FRMD3A2A2Y4 597 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 HEPACAM2A8MVW5 462 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 TDGF1P13385 188 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 ATF6P18850 670 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 GDI1P31150 447 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 HOXC13P31276 330 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 HOXD13P35453 343 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 RPS9P46781 194 aaKnown RBP7.6□□□□□ -1.19
HDAC3-207ENST00000475549 CSTF1Q05048 431 aaKnown RBP7.6□□□□□ -1.19
HDAC3-207ENST00000475549 FCHO2Q0JRZ9 810 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 GAS6Q14393 721 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 TMEM132DQ14C87 1099 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 RRAGBQ5VZM2 374 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 SLFN12LQ6IEE8 588 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 ZNF852Q6ZMS4 543 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 USP37Q86T82 979 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 TMEM150AQ86TG1 271 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 ARID3BQ8IVW6 561 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-207ENST00000475549 MFSD6LQ8IWD5 586 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 PIP4P2Q8N4L2 257 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 KRI1Q8N9T8 703 aaKnown RBP7.6□□□□□ -1.19
HDAC3-207ENST00000475549 ZBTB44Q8NCP5 570 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 RASSF8Q8NHQ8 419 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 KCNG4Q8TDN1 519 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 PSMG2Q969U7 264 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 NELL2Q99435 816 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 OXCT2Q9BYC2 517 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-207ENST00000475549 BCO2Q9BYV7 579 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 BACH2Q9BYV9 841 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 SEMA4AQ9H3S1 761 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 BRD9Q9H8M2 597 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms