RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 RPF1Q9H9Y2 349 aaKnown RBP27.06■■□□□ 1.92
TMEM54-205ENST00000475208 ODF2LQ9ULJ1 636 aa27.06■■□□□ 1.92
TMEM54-205ENST00000475208 K7ENM7 598 aa27.05■■□□□ 1.92
TMEM54-205ENST00000475208 PPEF2O14830 753 aa27.05■■□□□ 1.92
TMEM54-205ENST00000475208 OGTO15294 1046 aa27.05■■□□□ 1.92
TMEM54-205ENST00000475208 TYMPP19971 482 aa27.05■■□□□ 1.92
TMEM54-205ENST00000475208 CCNE1P24864 410 aa27.05■■□□□ 1.92
TMEM54-205ENST00000475208 ALDH1A3P47895 512 aa27.05■■□□□ 1.92
TMEM54-205ENST00000475208 CCR3P51677 355 aa27.05■■□□□ 1.92
TMEM54-205ENST00000475208 PPP2R5DQ14738 602 aa27.05■■□□□ 1.92
TMEM54-205ENST00000475208 MAMSTRQ6ZN01 415 aa27.05■■□□□ 1.92
TMEM54-205ENST00000475208 GPBP1Q86WP2 473 aa27.05■■□□□ 1.92
TMEM54-205ENST00000475208 CSGALNACT1Q8TDX6 532 aa27.05■■□□□ 1.92
TMEM54-205ENST00000475208 TBX20Q9UMR3 447 aa27.05■■□□□ 1.92
TMEM54-205ENST00000475208 NCOR2Q9Y618 2525 aa27.04■■□□□ 1.92
TMEM54-205ENST00000475208 MTMR11A4FU01 709 aa27.04■■□□□ 1.92
TMEM54-205ENST00000475208 PIGRP01833 764 aa27.04■■□□□ 1.92
TMEM54-205ENST00000475208 NRLP54845 237 aa27.04■■□□□ 1.92
TMEM54-205ENST00000475208 MYBPC2Q14324 1141 aa27.04■■□□□ 1.92
TMEM54-205ENST00000475208 STXBP5Q5T5C0 1151 aa27.04■■□□□ 1.92
TMEM54-205ENST00000475208 CENPPQ6IPU0 288 aa27.04■■□□□ 1.92
TMEM54-205ENST00000475208 FAM212AQ96EL1 285 aa27.04■■□□□ 1.92
TMEM54-205ENST00000475208 TSPAN18Q96SJ8 248 aa27.04■■□□□ 1.92
TMEM54-205ENST00000475208 GMEB2Q9UKD1 530 aa27.04■■□□□ 1.92
TMEM54-205ENST00000475208 SLC27A5Q9Y2P5 690 aa27.04■■□□□ 1.92
TMEM54-205ENST00000475208 H3BQV1 296 aa27.03■■□□□ 1.92
TMEM54-205ENST00000475208 FAM13AO94988 1023 aa27.03■■□□□ 1.92
TMEM54-205ENST00000475208 CHRNB1P11230 501 aa27.03■■□□□ 1.92
TMEM54-205ENST00000475208 DHX8Q14562 1220 aaKnown RBP27.03■■□□□ 1.92
TMEM54-205ENST00000475208 SPATA1Q5VX52 437 aa27.03■■□□□ 1.92
TMEM54-205ENST00000475208 MYCT1Q8N699 235 aa27.03■■□□□ 1.92
TMEM54-205ENST00000475208 TTC9BQ8N6N2 239 aa27.03■■□□□ 1.92
TMEM54-205ENST00000475208 ATAD1Q8NBU5 361 aa27.03■■□□□ 1.92
TMEM54-205ENST00000475208 MSANTD3Q96H12 275 aa27.03■■□□□ 1.92
TMEM54-205ENST00000475208 TMEM209Q96SK2 561 aa27.03■■□□□ 1.92
TMEM54-205ENST00000475208 MSTO1Q9BUK6 570 aa27.03■■□□□ 1.92
TMEM54-205ENST00000475208 USP18Q9UMW8 372 aa27.03■■□□□ 1.92
TMEM54-205ENST00000475208 CHADO15335 359 aa27.02■■□□□ 1.92
TMEM54-205ENST00000475208 SOAT2O75908 522 aa27.02■■□□□ 1.92
TMEM54-205ENST00000475208 ADRB2P07550 413 aa27.02■■□□□ 1.92
TMEM54-205ENST00000475208 ODC1P11926 461 aa27.02■■□□□ 1.92
TMEM54-205ENST00000475208 LILRA4P59901 499 aa27.02■■□□□ 1.92
TMEM54-205ENST00000475208 LMNB2Q03252 620 aa27.02■■□□□ 1.92
TMEM54-205ENST00000475208 FCHO2Q0JRZ9 810 aa27.02■■□□□ 1.92
TMEM54-205ENST00000475208 JADE1Q6IE81 842 aa27.02■■□□□ 1.92
TMEM54-205ENST00000475208 GPIHBP1Q8IV16 184 aa27.02■■□□□ 1.92
TMEM54-205ENST00000475208 LRRC15Q8TF66 581 aa27.02■■□□□ 1.92
TMEM54-205ENST00000475208 CALML4Q96GE6 196 aa27.02■■□□□ 1.92
TMEM54-205ENST00000475208 SENP8Q96LD8 212 aa27.02■■□□□ 1.92
TMEM54-205ENST00000475208 AK8Q96MA6 479 aa27.02■■□□□ 1.92
TMEM54-205ENST00000475208 PARVGQ9HBI0 331 aa27.02■■□□□ 1.92
TMEM54-205ENST00000475208 ASB3Q9Y575 518 aa27.02■■□□□ 1.92
TMEM54-205ENST00000475208 A0A0B4J269 797 aa27.01■■□□□ 1.91
TMEM54-205ENST00000475208 SLC38A8A6NNN8 435 aa27.01■■□□□ 1.91
TMEM54-205ENST00000475208 SLC26A4O43511 780 aa27.01■■□□□ 1.91
TMEM54-205ENST00000475208 SDHBP21912 280 aa27.01■■□□□ 1.91
TMEM54-205ENST00000475208 SCP2P22307 547 aa27.01■■□□□ 1.91
TMEM54-205ENST00000475208 GJB2P29033 226 aa27.01■■□□□ 1.91
TMEM54-205ENST00000475208 SOX9P48436 509 aa27.01■■□□□ 1.91
TMEM54-205ENST00000475208 KPNA1P52294 538 aaPredicted RBP27.01■■□□□ 1.91
TMEM54-205ENST00000475208 ZNF131P52739 623 aa27.01■■□□□ 1.91
TMEM54-205ENST00000475208 MLLT6P55198 1093 aaPredicted RBP27.01■■□□□ 1.91
TMEM54-205ENST00000475208 SATB1Q01826 763 aa27.01■■□□□ 1.91
TMEM54-205ENST00000475208 GAS6Q14393 721 aa27.01■■□□□ 1.91
TMEM54-205ENST00000475208 RABEP1Q15276 862 aa27.01■■□□□ 1.91
TMEM54-205ENST00000475208 C8orf34Q49A92 452 aa27.01■■□□□ 1.91
TMEM54-205ENST00000475208 ARMCX5Q6P1M9 558 aa27.01■■□□□ 1.91
TMEM54-205ENST00000475208 ARID3BQ8IVW6 561 aaPredicted RBP27.01■■□□□ 1.91
TMEM54-205ENST00000475208 CD302Q8IX05 232 aa27.01■■□□□ 1.91
TMEM54-205ENST00000475208 PSMG2Q969U7 264 aa27.01■■□□□ 1.91
TMEM54-205ENST00000475208 MKNK1Q9BUB5 465 aa27.01■■□□□ 1.91
TMEM54-205ENST00000475208 CPSF3Q9UKF6 684 aaKnown RBP27.01■■□□□ 1.91
TMEM54-205ENST00000475208 RAB23Q9ULC3 237 aa27.01■■□□□ 1.91
TMEM54-205ENST00000475208 TSC2P49815 1807 aa27■■□□□ 1.91
TMEM54-205ENST00000475208 NFICP08651 508 aa27■■□□□ 1.91
TMEM54-205ENST00000475208 TGM1P22735 817 aa27■■□□□ 1.91
TMEM54-205ENST00000475208 UBA7P41226 1012 aa27■■□□□ 1.91
TMEM54-205ENST00000475208 CXCL12P48061 93 aa27■■□□□ 1.91
TMEM54-205ENST00000475208 LPAL2Q16609 132 aa27■■□□□ 1.91
TMEM54-205ENST00000475208 C9orf57Q5W0N0 161 aa27■■□□□ 1.91
TMEM54-205ENST00000475208 SLC39A4Q6P5W5 647 aa27■■□□□ 1.91
TMEM54-205ENST00000475208 C1orf228Q6PIY5 440 aa27■■□□□ 1.91
TMEM54-205ENST00000475208 GAREM2Q75VX8 874 aa27■■□□□ 1.91
TMEM54-205ENST00000475208 DNAJB7Q7Z6W7 309 aaPredicted RBP27■■□□□ 1.91
TMEM54-205ENST00000475208 TMX3Q96JJ7 454 aa27■■□□□ 1.91
TMEM54-205ENST00000475208 ATXN3LQ9H3M9 355 aa27■■□□□ 1.91
TMEM54-205ENST00000475208 C8orf33Q9H7E9 229 aaPredicted RBP27■■□□□ 1.91
TMEM54-205ENST00000475208 PARD6AQ9NPB6 346 aa27■■□□□ 1.91
TMEM54-205ENST00000475208 BLOC1S4Q9NUP1 217 aa27■■□□□ 1.91
TMEM54-205ENST00000475208 CDV3Q9UKY7 258 aaKnown RBP27■■□□□ 1.91
TMEM54-205ENST00000475208 PRR5-ARHGAP8B1AHC4 643 aa26.99■■□□□ 1.91
TMEM54-205ENST00000475208 TRAK2O60296 914 aa26.99■■□□□ 1.91
TMEM54-205ENST00000475208 KRT18P05783 430 aaKnown RBP26.99■■□□□ 1.91
TMEM54-205ENST00000475208 GABRR2P28476 465 aa26.99■■□□□ 1.91
TMEM54-205ENST00000475208 ARHGAP8P85298 464 aa26.99■■□□□ 1.91
TMEM54-205ENST00000475208 LRRC32Q14392 662 aa26.99■■□□□ 1.91
TMEM54-205ENST00000475208 GPR158Q5T848 1215 aa26.99■■□□□ 1.91
TMEM54-205ENST00000475208 CELF5Q8N6W0 485 aaKnown RBP26.99■■□□□ 1.91
TMEM54-205ENST00000475208 OR10T2Q8NGX3 314 aa26.99■■□□□ 1.91
TMEM54-205ENST00000475208 ZHX3Q9H4I2 956 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms