RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 CYP11B1P15538 503 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 SELPP16109 830 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 ATF7P17544 494 aaPredicted RBP7.09□□□□□ -1.27
ATG4A-207ENST00000474825 PAX3P23760 479 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 CD52P31358 61 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 MAGEA1P43355 309 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 YARSP54577 528 aaKnown RBP7.09□□□□□ -1.27
ATG4A-207ENST00000474825 RBP5P82980 135 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 TFAMQ00059 246 aaKnown RBP7.09□□□□□ -1.27
ATG4A-207ENST00000474825 CDR2Q01850 454 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 GFPT1Q06210 699 aaPredicted RBP7.09□□□□□ -1.27
ATG4A-207ENST00000474825 INCA1Q0VD86 236 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 PAK2Q13177 524 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 BFSP2Q13515 415 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 SPA17Q15506 151 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 PTPN14Q15678 1187 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 ARHGAP44Q17R89 818 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 PLEKHG4Q58EX7 1191 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 SPOPLQ6IQ16 392 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 ALKBH5Q6P6C2 394 aaKnown RBP7.09□□□□□ -1.27
ATG4A-207ENST00000474825 SLC39A5Q6ZMH5 540 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 AGMOQ6ZNB7 445 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 LRRC8DQ7L1W4 858 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 RTN4RL1Q86UN2 441 aaPredicted RBP7.09□□□□□ -1.27
ATG4A-207ENST00000474825 CRIPAKQ8N1N5 446 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 TXLNBQ8N3L3 684 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 TTC39CQ8N584 583 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 BEST2Q8NFU1 509 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 U2AF1L4Q8WU68 220 aaKnown RBP7.09□□□□□ -1.27
ATG4A-207ENST00000474825 ATRIPQ8WXE1 791 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 PPP1R10Q96QC0 940 aaKnown RBP7.09□□□□□ -1.27
ATG4A-207ENST00000474825 ARID3AQ99856 593 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 AGPAT1Q99943 283 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 IMPG2Q9BZV3 1241 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 TRIM6Q9C030 488 aaPredicted RBP7.09□□□□□ -1.27
ATG4A-207ENST00000474825 LACRTQ9GZZ8 138 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 UBN1Q9NPG3 1134 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 GDAP2Q9NXN4 497 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 DPP3Q9NY33 737 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 ADAMTS1Q9UHI8 967 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 NOD1Q9Y239 953 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 HES2Q9Y543 173 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 A0A0A6YYK5 440 aaPredicted RBP7.08□□□□□ -1.28
ATG4A-207ENST00000474825 FANCGO15287 622 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 XPOTO43592 962 aaKnown RBP7.08□□□□□ -1.28
ATG4A-207ENST00000474825 RNF40O75150 1001 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 IPO7O95373 1038 aaKnown RBP7.08□□□□□ -1.28
ATG4A-207ENST00000474825 ABL1P00519 1130 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 CYP1A1P04798 512 aaPredicted RBP7.08□□□□□ -1.28
ATG4A-207ENST00000474825 ITGB3P05106 788 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 TNNT1P13805 278 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 ZSCAN20P17040 1043 aaPredicted RBP7.08□□□□□ -1.28
ATG4A-207ENST00000474825 AKAP5P24588 427 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 PNPLA4P41247 253 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 HADHBP55084 474 aaKnown RBP7.08□□□□□ -1.28
ATG4A-207ENST00000474825 COPS2P61201 443 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 FMO1Q01740 532 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 CYP27A1Q02318 531 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 FAAP100Q0VG06 881 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 NFX1Q12986 1120 aaKnown RBP7.08□□□□□ -1.28
ATG4A-207ENST00000474825 TRPC3Q13507 836 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 ZNF699Q32M78 642 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 TDRD12Q587J7 1177 aaKnown RBP7.08□□□□□ -1.28
ATG4A-207ENST00000474825 ZNF667Q5HYK9 610 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 C9orf57Q5W0N0 161 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 TWF2Q6IBS0 349 aaKnown RBP7.08□□□□□ -1.28
ATG4A-207ENST00000474825 DPH6Q7L8W6 267 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 NOP9Q86U38 636 aaKnown RBP7.08□□□□□ -1.28
ATG4A-207ENST00000474825 SLC47A2Q86VL8 602 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 VPS36Q86VN1 386 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 ECHDC2Q86YB7 292 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 HACE1Q8IYU2 909 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 RNF10Q8N5U6 811 aaKnown RBP7.08□□□□□ -1.28
ATG4A-207ENST00000474825 WHAMMQ8TF30 809 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 UBE2Q2Q8WVN8 375 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 LINC01599Q8WXQ3 324 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 RSPH1Q8WYR4 309 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 HPDLQ96IR7 371 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 FTHL17Q9BXU8 183 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 IFIH1Q9BYX4 1025 aaKnown RBP7.08□□□□□ -1.28
ATG4A-207ENST00000474825 TSGA10Q9BZW7 698 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 DEF6Q9H4E7 631 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 ELAC1Q9H777 363 aaKnown RBP7.08□□□□□ -1.28
ATG4A-207ENST00000474825 LUC7LQ9NQ29 371 aaKnown RBP7.08□□□□□ -1.28
ATG4A-207ENST00000474825 CISHQ9NSE2 258 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 ANK1P16157 1881 aa7.08□□□□□ -1.28
ATG4A-207ENST00000474825 MKI67P46013 3256 aaKnown RBP7.08□□□□□ -1.28
ATG4A-207ENST00000474825 RALGAPA2Q2PPJ7 1873 aa7.07□□□□□ -1.28
ATG4A-207ENST00000474825 RNF223E7ERA6 249 aa7.07□□□□□ -1.28
ATG4A-207ENST00000474825 TLR3O15455 904 aaKnown RBP7.07□□□□□ -1.28
ATG4A-207ENST00000474825 KRT86O43790 486 aa7.07□□□□□ -1.28
ATG4A-207ENST00000474825 NBNO60934 754 aa7.07□□□□□ -1.28
ATG4A-207ENST00000474825 RTN2O75298 545 aa7.07□□□□□ -1.28
ATG4A-207ENST00000474825 CILPO75339 1184 aa7.07□□□□□ -1.28
ATG4A-207ENST00000474825 TACC1O75410 805 aa7.07□□□□□ -1.28
ATG4A-207ENST00000474825 MTA2O94776 668 aa7.07□□□□□ -1.28
ATG4A-207ENST00000474825 PAEPP09466 180 aa7.07□□□□□ -1.28
ATG4A-207ENST00000474825 TMEM253P0C7T8 217 aa7.07□□□□□ -1.28
ATG4A-207ENST00000474825 UNGP13051 313 aaPredicted RBP7.07□□□□□ -1.28
ATG4A-207ENST00000474825 ITGA4P13612 1032 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms