RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 DNA2P51530 1060 aa21.11■□□□□ 0.97
SSR1-204ENST00000474597 HADHBP55084 474 aaKnown RBP21.11■□□□□ 0.97
SSR1-204ENST00000474597 CENPCQ03188 943 aa21.11■□□□□ 0.97
SSR1-204ENST00000474597 PAK2Q13177 524 aa21.11■□□□□ 0.97
SSR1-204ENST00000474597 ERCC6LQ2NKX8 1250 aa21.11■□□□□ 0.97
SSR1-204ENST00000474597 TEX35Q5T0J7 233 aa21.11■□□□□ 0.97
SSR1-204ENST00000474597 CCDC181Q5TID7 509 aa21.11■□□□□ 0.97
SSR1-204ENST00000474597 TTC39CQ8N584 583 aa21.11■□□□□ 0.97
SSR1-204ENST00000474597 LRRC52Q8N7C0 313 aa21.11■□□□□ 0.97
SSR1-204ENST00000474597 SH3TC2Q8TF17 1288 aa21.11■□□□□ 0.97
SSR1-204ENST00000474597 FAM105AQ9NUU6 356 aa21.11■□□□□ 0.97
SSR1-204ENST00000474597 CNOT8Q9UFF9 292 aaKnown RBP21.11■□□□□ 0.97
SSR1-204ENST00000474597 AMFRQ9UKV5 643 aa21.11■□□□□ 0.97
SSR1-204ENST00000474597 CEP83Q9Y592 693 aa21.11■□□□□ 0.97
SSR1-204ENST00000474597 A0A0U1RQG5 324 aaPredicted RBP21.1■□□□□ 0.97
SSR1-204ENST00000474597 ATMINO43313 823 aaPredicted RBP21.1■□□□□ 0.97
SSR1-204ENST00000474597 MED7O43513 233 aa21.1■□□□□ 0.97
SSR1-204ENST00000474597 BUB1BO60566 1050 aaPredicted RBP21.1■□□□□ 0.97
SSR1-204ENST00000474597 CYP1A2P05177 515 aa21.1■□□□□ 0.97
SSR1-204ENST00000474597 PAEPP09466 180 aa21.1■□□□□ 0.97
SSR1-204ENST00000474597 MYBL1P10243 752 aa21.1■□□□□ 0.97
SSR1-204ENST00000474597 CD19P15391 556 aa21.1■□□□□ 0.97
SSR1-204ENST00000474597 CXCR5P32302 372 aa21.1■□□□□ 0.97
SSR1-204ENST00000474597 TUBB4BP68371 445 aa21.1■□□□□ 0.97
SSR1-204ENST00000474597 TCEAL1Q15170 157 aa21.1■□□□□ 0.97
SSR1-204ENST00000474597 ELF2Q15723 593 aa21.1■□□□□ 0.97
SSR1-204ENST00000474597 XKR4Q5GH76 650 aa21.1■□□□□ 0.97
SSR1-204ENST00000474597 FBXO47Q5MNV8 452 aa21.1■□□□□ 0.97
SSR1-204ENST00000474597 SLFN11Q7Z7L1 901 aa21.1■□□□□ 0.97
SSR1-204ENST00000474597 NUP85Q9BW27 656 aa21.1■□□□□ 0.97
SSR1-204ENST00000474597 SDCBP2Q9H190 292 aa21.1■□□□□ 0.97
SSR1-204ENST00000474597 GOLPH3Q9H4A6 298 aa21.1■□□□□ 0.97
SSR1-204ENST00000474597 FAM124BQ9H5Z6 455 aaPredicted RBP21.1■□□□□ 0.97
SSR1-204ENST00000474597 UVRAGQ9P2Y5 699 aa21.1■□□□□ 0.97
SSR1-204ENST00000474597 SCN1AP35498 2009 aa21.1■□□□□ 0.97
SSR1-204ENST00000474597 CAND2O75155 1236 aa21.09■□□□□ 0.97
SSR1-204ENST00000474597 ITGA4P13612 1032 aa21.09■□□□□ 0.97
SSR1-204ENST00000474597 CD52P31358 61 aa21.09■□□□□ 0.97
SSR1-204ENST00000474597 NOMO3P69849 1222 aa21.09■□□□□ 0.97
SSR1-204ENST00000474597 LIN9Q5TKA1 542 aa21.09■□□□□ 0.97
SSR1-204ENST00000474597 MCOLN2Q8IZK6 566 aa21.09■□□□□ 0.97
SSR1-204ENST00000474597 ERVK-5Q9HDB9 667 aa21.09■□□□□ 0.97
SSR1-204ENST00000474597 RNF19AQ9NV58 838 aa21.09■□□□□ 0.97
SSR1-204ENST00000474597 PADI3Q9ULW8 664 aa21.09■□□□□ 0.97
SSR1-204ENST00000474597 COG5Q9UP83 839 aa21.09■□□□□ 0.97
SSR1-204ENST00000474597 CILPO75339 1184 aa21.08■□□□□ 0.97
SSR1-204ENST00000474597 KIF4AO95239 1232 aa21.08■□□□□ 0.97
SSR1-204ENST00000474597 CFHP08603 1231 aa21.08■□□□□ 0.97
SSR1-204ENST00000474597 PAFAH1B1P43034 410 aa21.08■□□□□ 0.97
SSR1-204ENST00000474597 PTPROQ16827 1216 aa21.08■□□□□ 0.97
SSR1-204ENST00000474597 C9orf57Q5W0N0 161 aa21.08■□□□□ 0.97
SSR1-204ENST00000474597 ZNF564Q8TBZ8 553 aaPredicted RBP21.08■□□□□ 0.97
SSR1-204ENST00000474597 COG1Q8WTW3 980 aa21.08■□□□□ 0.97
SSR1-204ENST00000474597 RPGRIP1Q96KN7 1286 aa21.08■□□□□ 0.97
SSR1-204ENST00000474597 ZNF560Q96MR9 790 aa21.08■□□□□ 0.97
SSR1-204ENST00000474597 AGO3Q9H9G7 860 aaKnown RBP21.08■□□□□ 0.97
SSR1-204ENST00000474597 LSM8O95777 96 aaKnown RBP21.08■□□□□ 0.96
SSR1-204ENST00000474597 FAM26DQ5JW98 314 aa21.08■□□□□ 0.96
SSR1-204ENST00000474597 NT5DC3Q86UY8 548 aa21.08■□□□□ 0.96
SSR1-204ENST00000474597 TMEM35BQ8NCS4 154 aa21.08■□□□□ 0.96
SSR1-204ENST00000474597 TMEM176AQ96HP8 235 aa21.08■□□□□ 0.96
SSR1-204ENST00000474597 RPS6KC1Q96S38 1066 aa21.08■□□□□ 0.96
SSR1-204ENST00000474597 ADAM22Q9P0K1 906 aa21.08■□□□□ 0.96
SSR1-204ENST00000474597 BARX2Q9UMQ3 279 aaPredicted RBP21.08■□□□□ 0.96
SSR1-204ENST00000474597 SNX9Q9Y5X1 595 aa21.08■□□□□ 0.96
SSR1-204ENST00000474597 MTA2O94776 668 aa21.07■□□□□ 0.96
SSR1-204ENST00000474597 CYP3A5P20815 502 aa21.07■□□□□ 0.96
SSR1-204ENST00000474597 PNPLA4P41247 253 aa21.07■□□□□ 0.96
SSR1-204ENST00000474597 RAD23BP54727 409 aa21.07■□□□□ 0.96
SSR1-204ENST00000474597 TRIM71Q2Q1W2 868 aaKnown RBP21.07■□□□□ 0.96
SSR1-204ENST00000474597 ZNF618Q5T7W0 954 aa21.07■□□□□ 0.96
SSR1-204ENST00000474597 RSRC2Q7L4I2 434 aaKnown RBP21.07■□□□□ 0.96
SSR1-204ENST00000474597 CREG2Q8IUH2 290 aa21.07■□□□□ 0.96
SSR1-204ENST00000474597 USP38Q8NB14 1042 aa21.07■□□□□ 0.96
SSR1-204ENST00000474597 VCPIP1Q96JH7 1222 aa21.07■□□□□ 0.96
SSR1-204ENST00000474597 ZNF518BQ9C0D4 1074 aa21.07■□□□□ 0.96
SSR1-204ENST00000474597 RNF14Q9UBS8 474 aa21.07■□□□□ 0.96
SSR1-204ENST00000474597 CHORDC1Q9UHD1 332 aaPredicted RBP21.07■□□□□ 0.96
SSR1-204ENST00000474597 PCDHGC3Q9UN70 934 aa21.07■□□□□ 0.96
SSR1-204ENST00000474597 TMEM110-MUSTN1A8MSY1 372 aa21.06■□□□□ 0.96
SSR1-204ENST00000474597 PPEF2O14830 753 aa21.06■□□□□ 0.96
SSR1-204ENST00000474597 LPIN1Q14693 890 aa21.06■□□□□ 0.96
SSR1-204ENST00000474597 C11orf63Q6NUN7 778 aa21.06■□□□□ 0.96
SSR1-204ENST00000474597 MON1BQ7L1V2 547 aa21.06■□□□□ 0.96
SSR1-204ENST00000474597 PHF13Q86YI8 300 aaPredicted RBP21.06■□□□□ 0.96
SSR1-204ENST00000474597 C11orf70Q9BRQ4 267 aa21.06■□□□□ 0.96
SSR1-204ENST00000474597 TRPV6Q9H1D0 765 aa21.06■□□□□ 0.96
SSR1-204ENST00000474597 AVENQ9NQS1 362 aaPredicted RBP21.06■□□□□ 0.96
SSR1-204ENST00000474597 PHF24Q9UPV7 400 aa21.06■□□□□ 0.96
SSR1-204ENST00000474597 ARVCFO00192 962 aa21.06■□□□□ 0.96
SSR1-204ENST00000474597 KCNK3O14649 394 aa21.06■□□□□ 0.96
SSR1-204ENST00000474597 RAB27AP51159 221 aa21.06■□□□□ 0.96
SSR1-204ENST00000474597 INCA1Q0VD86 236 aa21.06■□□□□ 0.96
SSR1-204ENST00000474597 MESDQ14696 234 aa21.06■□□□□ 0.96
SSR1-204ENST00000474597 CFAP221Q4G0U5 840 aa21.06■□□□□ 0.96
SSR1-204ENST00000474597 SLC43A3Q8NBI5 491 aa21.06■□□□□ 0.96
SSR1-204ENST00000474597 SLC4A11Q8NBS3 891 aa21.06■□□□□ 0.96
SSR1-204ENST00000474597 TFAP2BQ92481 460 aa21.06■□□□□ 0.96
SSR1-204ENST00000474597 RABGGTAQ92696 567 aa21.06■□□□□ 0.96
SSR1-204ENST00000474597 SELENOOQ9BVL4 669 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms