RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 NR3C1P04150 777 aa15.32■□□□□ 0.04
VAMP4-203ENST00000474047 PSMD6Q15008 389 aa15.32■□□□□ 0.04
VAMP4-203ENST00000474047 CEP135Q66GS9 1140 aa15.32■□□□□ 0.04
VAMP4-203ENST00000474047 RTL10Q7L3V2 364 aa15.32■□□□□ 0.04
VAMP4-203ENST00000474047 PLCD3Q8N3E9 789 aa15.32■□□□□ 0.04
VAMP4-203ENST00000474047 KCTD10Q9H3F6 313 aa15.32■□□□□ 0.04
VAMP4-203ENST00000474047 FRMD4BQ9Y2L6 1034 aa15.32■□□□□ 0.04
VAMP4-203ENST00000474047 SCN1AP35498 2009 aa15.32■□□□□ 0.04
VAMP4-203ENST00000474047 DCXO43602 365 aa15.31■□□□□ 0.04
VAMP4-203ENST00000474047 PHACTR2O75167 634 aa15.31■□□□□ 0.04
VAMP4-203ENST00000474047 ABLIM3O94929 683 aa15.31■□□□□ 0.04
VAMP4-203ENST00000474047 ATF2P15336 505 aa15.31■□□□□ 0.04
VAMP4-203ENST00000474047 GBP2P32456 591 aaPredicted RBP15.31■□□□□ 0.04
VAMP4-203ENST00000474047 ADCY1Q08828 1119 aa15.31■□□□□ 0.04
VAMP4-203ENST00000474047 ELMOD1Q8N336 334 aa15.31■□□□□ 0.04
VAMP4-203ENST00000474047 LRRC52Q8N7C0 313 aa15.31■□□□□ 0.04
VAMP4-203ENST00000474047 OR5B17Q8NGF7 314 aa15.31■□□□□ 0.04
VAMP4-203ENST00000474047 FEZF2Q8TBJ5 459 aa15.31■□□□□ 0.04
VAMP4-203ENST00000474047 ZNF707Q96C28 371 aaPredicted RBP15.31■□□□□ 0.04
VAMP4-203ENST00000474047 FAM84AQ96KN4 292 aa15.31■□□□□ 0.04
VAMP4-203ENST00000474047 GSDMAQ96QA5 445 aa15.31■□□□□ 0.04
VAMP4-203ENST00000474047 CGRRF1Q99675 332 aa15.31■□□□□ 0.04
VAMP4-203ENST00000474047 RHOBTB2Q9BYZ6 727 aa15.31■□□□□ 0.04
VAMP4-203ENST00000474047 WDR6Q9NNW5 1121 aaKnown RBP15.31■□□□□ 0.04
VAMP4-203ENST00000474047 USTQ9Y2C2 406 aa15.31■□□□□ 0.04
VAMP4-203ENST00000474047 C2CD4DB7Z1M9 353 aa15.31■□□□□ 0.04
VAMP4-203ENST00000474047 GADD45BO75293 160 aaPredicted RBP15.31■□□□□ 0.04
VAMP4-203ENST00000474047 RPL13P26373 211 aaKnown RBP15.31■□□□□ 0.04
VAMP4-203ENST00000474047 HOXA9P31269 272 aa15.31■□□□□ 0.04
VAMP4-203ENST00000474047 TRPC3Q13507 836 aa15.31■□□□□ 0.04
VAMP4-203ENST00000474047 WSCD1Q658N2 575 aa15.31■□□□□ 0.04
VAMP4-203ENST00000474047 GRASPQ7Z6J2 395 aaPredicted RBP15.31■□□□□ 0.04
VAMP4-203ENST00000474047 GUF1Q8N442 669 aaKnown RBP15.31■□□□□ 0.04
VAMP4-203ENST00000474047 MFSD14AQ96MC6 490 aa15.31■□□□□ 0.04
VAMP4-203ENST00000474047 C1QTNF1Q9BXJ1 281 aa15.31■□□□□ 0.04
VAMP4-203ENST00000474047 GTPBP4Q9BZE4 634 aaKnown RBP15.31■□□□□ 0.04
VAMP4-203ENST00000474047 EPHX3Q9H6B9 360 aa15.31■□□□□ 0.04
VAMP4-203ENST00000474047 AFF4Q9UHB7 1163 aaKnown RBP15.31■□□□□ 0.04
VAMP4-203ENST00000474047 MUTYHQ9UIF7 546 aa15.31■□□□□ 0.04
VAMP4-203ENST00000474047 MAFFQ9ULX9 164 aa15.31■□□□□ 0.04
VAMP4-203ENST00000474047 CLUHO75153 1309 aa15.31■□□□□ 0.04
VAMP4-203ENST00000474047 PI4K2BG5E9Z4 385 aa15.3■□□□□ 0.04
VAMP4-203ENST00000474047 CYP11A1P05108 521 aa15.3■□□□□ 0.04
VAMP4-203ENST00000474047 OR4Q2P0C623 313 aa15.3■□□□□ 0.04
VAMP4-203ENST00000474047 MYBPC2Q14324 1141 aa15.3■□□□□ 0.04
VAMP4-203ENST00000474047 RNF19BQ6ZMZ0 732 aa15.3■□□□□ 0.04
VAMP4-203ENST00000474047 TRAPPC11Q7Z392 1133 aa15.3■□□□□ 0.04
VAMP4-203ENST00000474047 SLC9A9Q8IVB4 645 aa15.3■□□□□ 0.04
VAMP4-203ENST00000474047 TCEAL8Q8IYN2 117 aa15.3■□□□□ 0.04
VAMP4-203ENST00000474047 KHSRPQ92945 711 aaKnown RBP eCLIP15.3■□□□□ 0.04
VAMP4-203ENST00000474047 HPDLQ96IR7 371 aa15.3■□□□□ 0.04
VAMP4-203ENST00000474047 PGLYRP2Q96PD5 576 aa15.3■□□□□ 0.04
VAMP4-203ENST00000474047 LIMD1Q9UGP4 676 aa15.3■□□□□ 0.04
VAMP4-203ENST00000474047 PCDHA5Q9Y5H7 936 aa15.3■□□□□ 0.04
VAMP4-203ENST00000474047 SNX9Q9Y5X1 595 aa15.3■□□□□ 0.04
VAMP4-203ENST00000474047 C2orf16Q68DN1 1984 aa15.3■□□□□ 0.04
VAMP4-203ENST00000474047 FSHRP23945 695 aa15.29■□□□□ 0.04
VAMP4-203ENST00000474047 BIRC3Q13489 604 aa15.29■□□□□ 0.04
VAMP4-203ENST00000474047 ZNF658Q5TYW1 1059 aaPredicted RBP15.29■□□□□ 0.04
VAMP4-203ENST00000474047 GET4Q7L5D6 327 aaPredicted RBP15.29■□□□□ 0.04
VAMP4-203ENST00000474047 SMYD4Q8IYR2 804 aaPredicted RBP15.29■□□□□ 0.04
VAMP4-203ENST00000474047 ERCC4Q92889 916 aaPredicted RBP15.29■□□□□ 0.04
VAMP4-203ENST00000474047 DMAC2Q9NW81 257 aa15.29■□□□□ 0.04
VAMP4-203ENST00000474047 SIX4Q9UIU6 781 aa15.29■□□□□ 0.04
VAMP4-203ENST00000474047 TRAF3IP3Q9Y228 551 aa15.29■□□□□ 0.04
VAMP4-203ENST00000474047 PTPRJQ12913 1337 aa15.29■□□□□ 0.04
VAMP4-203ENST00000474047 SPTBN5Q9NRC6 3674 aaKnown RBP15.29■□□□□ 0.04
VAMP4-203ENST00000474047 SEC24AO95486 1093 aa15.29■□□□□ 0.04
VAMP4-203ENST00000474047 NR2F2P24468 414 aa15.29■□□□□ 0.04
VAMP4-203ENST00000474047 AP3M2P53677 418 aa15.29■□□□□ 0.04
VAMP4-203ENST00000474047 UBE2HP62256 183 aa15.29■□□□□ 0.04
VAMP4-203ENST00000474047 TSPY1Q01534 308 aa15.29■□□□□ 0.04
VAMP4-203ENST00000474047 GPR17Q13304 367 aa15.29■□□□□ 0.04
VAMP4-203ENST00000474047 STIM1Q13586 685 aa15.29■□□□□ 0.04
VAMP4-203ENST00000474047 IQCEQ6IPM2 695 aa15.29■□□□□ 0.04
VAMP4-203ENST00000474047 DCP1BQ8IZD4 617 aaKnown RBP15.29■□□□□ 0.04
VAMP4-203ENST00000474047 ZDHHC14Q8IZN3 488 aa15.29■□□□□ 0.04
VAMP4-203ENST00000474047 TMEM86AQ8N2M4 240 aa15.29■□□□□ 0.04
VAMP4-203ENST00000474047 BORCS6Q96GS4 357 aa15.29■□□□□ 0.04
VAMP4-203ENST00000474047 MMS19Q96T76 1030 aa15.29■□□□□ 0.04
VAMP4-203ENST00000474047 TSG101Q99816 390 aa15.29■□□□□ 0.04
VAMP4-203ENST00000474047 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.29■□□□□ 0.04
VAMP4-203ENST00000474047 INSL5Q9Y5Q6 135 aa15.29■□□□□ 0.04
VAMP4-203ENST00000474047 BDP1A6H8Y1 2624 aa15.28■□□□□ 0.04
VAMP4-203ENST00000474047 KRT13P13646 458 aa15.28■□□□□ 0.04
VAMP4-203ENST00000474047 PTPN2P17706 415 aa15.28■□□□□ 0.04
VAMP4-203ENST00000474047 ALDH1A3P47895 512 aa15.28■□□□□ 0.04
VAMP4-203ENST00000474047 CASP4P49662 377 aa15.28■□□□□ 0.04
VAMP4-203ENST00000474047 NTHL1P78549 312 aa15.28■□□□□ 0.04
VAMP4-203ENST00000474047 MYL7Q01449 175 aa15.28■□□□□ 0.04
VAMP4-203ENST00000474047 ADAM9Q13443 819 aa15.28■□□□□ 0.04
VAMP4-203ENST00000474047 PABPC1LQ4VXU2 614 aaKnown RBP15.28■□□□□ 0.04
VAMP4-203ENST00000474047 SLC39A12Q504Y0 691 aa15.28■□□□□ 0.04
VAMP4-203ENST00000474047 ELOA2Q8IYF1 753 aaPredicted RBP15.28■□□□□ 0.04
VAMP4-203ENST00000474047 PDCL2Q8N4E4 241 aa15.28■□□□□ 0.04
VAMP4-203ENST00000474047 ZNF512Q96ME7 567 aaPredicted RBP15.28■□□□□ 0.04
VAMP4-203ENST00000474047 GDAP2Q9NXN4 497 aa15.28■□□□□ 0.04
VAMP4-203ENST00000474047 PAPLNO95428 1278 aa15.27■□□□□ 0.04
VAMP4-203ENST00000474047 PRCPP42785 496 aa15.27■□□□□ 0.04
VAMP4-203ENST00000474047 TWF1Q12792 350 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms