RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 CATSPER3Q86XQ3 398 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 ELMOD1Q8N336 334 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 CEP120Q8N960 986 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 LEMD2Q8NC56 503 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 DEPTORQ8TB45 409 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 SHKBP1Q8TBC3 707 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 ZMAT2Q96NC0 199 aaKnown RBP5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 TM6SF1Q9BZW5 370 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 C8orf33Q9H7E9 229 aaPredicted RBP5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 SLC24A3Q9HC58 644 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 TUFT1Q9NNX1 390 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 ASAH2Q9NR71 780 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 RXFP3Q9NSD7 469 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 CEP72Q9P209 647 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 AFF4Q9UHB7 1163 aaKnown RBP5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 FBXL5Q9UKA1 691 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 IGSF10Q6WRI0 2623 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 RALGAPA1Q6GYQ0 2036 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 SPAG17Q6Q759 2223 aa5.63□□□□□ -1.51
SNRNP40-204ENST00000474025 GREB1Q4ZG55 1949 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 TRIP11Q15643 1979 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 ASH1LQ9NR48 2969 aaKnown RBP5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 ARHGEF35A5YM69 484 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 SLC38A8A6NNN8 435 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 SPECC1L-ADORA2AF8WAN1 911 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 H7C4K7 107 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 CHADO15335 359 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 PFKFB2O60825 505 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 REC8O95072 547 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 VNN2O95498 520 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 ZNF806P0C7X5 589 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 MYL4P12829 197 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 KCNE1P15382 129 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 CYP11B2P19099 503 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 GRM5P41594 1212 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 RAP1GAPP47736 663 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 KPNA1P52294 538 aaPredicted RBP5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 EFNA5P52803 228 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 CCINQ13939 588 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 PPP2R5AQ15172 486 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 TEAD2Q15562 447 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 CCDC6Q16204 474 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 CTXN3Q4LDR2 81 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 STXBP5Q5T5C0 1151 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 STPG1Q5TH74 334 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 IQCEQ6IPM2 695 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 ZNF280DQ6N043 979 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 CEP68Q76N32 757 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 CENPQQ7L2Z9 268 aaPredicted RBP5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 WDR5BQ86VZ2 330 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 TMC8Q8IU68 726 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 BEST2Q8NFU1 509 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 CSGALNACT1Q8TDX6 532 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 E2F7Q96AV8 911 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 C18orf25Q96B23 403 aaPredicted RBP5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 LOXL4Q96JB6 756 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 SUSD3Q96L08 255 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 ZNF512Q96ME7 567 aaPredicted RBP5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 LRRC3BQ96PB8 259 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 NACC1Q96RE7 527 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 MKNK1Q9BUB5 465 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 LRRC3Q9BY71 257 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 DNAJC25Q9H1X3 360 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 CDT1Q9H211 546 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 ARRDC1-AS1Q9H2J1 176 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 TMEM60Q9H2L4 133 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 CRISPLD1Q9H336 500 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 SLITRK6Q9H5Y7 841 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 BRMS1Q9HCU9 246 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 PTPRHQ9HD43 1115 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 TOPORSQ9NS56 1045 aaPredicted RBP5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 SLC38A7Q9NVC3 462 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 CNTN3Q9P232 1028 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 ORC3Q9UBD5 711 aaPredicted RBP5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 MAFFQ9ULX9 164 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 TNFSF13BQ9Y275 285 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 YIPF1Q9Y548 306 aa5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 FLNBO75369 2602 aaKnown RBP5.62□□□□□ -1.51
SNRNP40-204ENST00000474025 A0A1W2PRU2 124 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 ABLIM1O14639 778 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 AXIN1O15169 862 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 MEFVO15553 781 aaPredicted RBP5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 EPB41L2O43491 1005 aaKnown RBP5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 EXTL3O43909 919 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 RNF40O75150 1001 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 EPN2O95208 641 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 FDPSP14324 419 aaKnown RBP5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 CPB1P15086 417 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 PROZP22891 400 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 RPA1P27694 616 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 RPL9P32969 192 aaKnown RBP5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 PXNP49023 591 aaPredicted RBP5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 YARSP54577 528 aaKnown RBP5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 OSTNP61366 133 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 PDCD11Q14690 1871 aaKnown RBP5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 PON2Q15165 354 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 ZNF568Q3ZCX4 644 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 DGKKQ5KSL6 1271 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 PLA2G2CQ5R387 149 aa5.61□□□□□ -1.51
SNRNP40-204ENST00000474025 PKN3Q6P5Z2 889 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms