RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 ZNF713Q8N859 430 aaPredicted RBP5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 LRRC8CQ8TDW0 803 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 STARD8Q92502 1023 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 HPS3Q969F9 1004 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 ANKRD36BP1Q96IX9 119 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 EPSTI1Q96J88 318 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 GPR101Q96P66 508 aaPredicted RBP5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 PLVAPQ9BX97 442 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 RXFP1Q9HBX9 757 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 ABHD10Q9NUJ1 306 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 AP4E1Q9UPM8 1137 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 USP15Q9Y4E8 981 aaPredicted RBP5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 PASKQ96RG2 1323 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 FAM237AA0A1B0GTK4 181 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 TRIM64CA6NLI5 447 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 H0YGN5 161 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 FBP2O00757 339 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 SPTLC2O15270 562 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 TEX28O15482 410 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 SLC26A4O43511 780 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 IDEP14735 1019 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 PFKFB1P16118 471 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 RPL17P18621 184 aaKnown RBP5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 TXKP42681 527 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 RTP1P59025 263 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 SNRPNP63162 240 aaKnown RBP5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 SSRP1Q08945 709 aaKnown RBP5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 SLBPQ14493 270 aaKnown RBP eCLIP5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 EZH2Q15910 746 aaKnown RBP5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 FAM209AQ5JX71 171 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 B3GNT6Q6ZMB0 384 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 KIAA0907Q7Z7F0 614 aaPredicted RBP5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 GRAMD2AQ8IUY3 354 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 NEDD1Q8NHV4 660 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 GAB3Q8WWW8 586 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 INPP5DQ92835 1189 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 EFHD2Q96C19 240 aaPredicted RBP5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 DGCR14Q96DF8 476 aaKnown RBP5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 NSMCE3Q96MG7 304 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 PRPF18Q99633 342 aaKnown RBP5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 MEIS3Q99687 375 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 ASCC2Q9H1I8 757 aaPredicted RBP5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 LRMDAQ9H2I8 198 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 DPH5Q9H2P9 285 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 ENAMQ9NRM1 1142 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 FKBP14Q9NWM8 211 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 HMG20BQ9P0W2 317 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 CHPF2Q9P2E5 772 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 CNOT8Q9UFF9 292 aaKnown RBP5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 GTF3C4Q9UKN8 822 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 SUGT1Q9Y2Z0 365 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 NFS1Q9Y697 457 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 IKBKGQ9Y6K9 419 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 MAP3K15Q6ZN16 1313 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 SUSD5O60279 629 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 SNX3O60493 162 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 JAK2O60674 1132 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 FBXO21O94952 628 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 UNC5CO95185 931 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 GYPCP04921 128 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 UBL4AP11441 157 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 CDK4P11802 303 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 SYKP43405 635 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 GALK1P51570 392 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 ZNF844Q08AG5 666 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 KRT32Q14532 448 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 RRS1Q15050 365 aaKnown RBP5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 PTPN21Q16825 1174 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 C14orf80Q86SX3 495 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 TMEM192Q8IY95 271 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 PHACTR4Q8IZ21 702 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 CLASRPQ8N2M8 674 aaKnown RBP5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 KIF2BQ8N4N8 673 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 TTC30BQ8N4P2 665 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 TSPYL6Q8N831 410 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 KCT2Q8NC54 265 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 PLEKHO2Q8TD55 490 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 GSDMAQ96QA5 445 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 ELAC2Q9BQ52 826 aaKnown RBP5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 MRPL18Q9H0U6 180 aaKnown RBP5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 AS3MTQ9HBK9 375 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 COMMD8Q9NX08 183 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 NFU1Q9UMS0 254 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 SNX9Q9Y5X1 595 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 MYH7P12883 1935 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 SH3PXD2BA1X283 911 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 FAM47E-STBD1D6RA91 191 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 DTNBO60941 627 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 GLRX3O76003 335 aaKnown RBP5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 ZBED1O96006 694 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 APOEP02649 317 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 HSPA1AP0DMV8 641 aaKnown RBP5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 HSPA1BP0DMV9 641 aaKnown RBP5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 BDNFP23560 247 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 EIF3BP55884 814 aaKnown RBP5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 TUBA3CQ13748 450 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 E2F2Q14209 437 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 CCDC6Q16204 474 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 ZCWPW2Q504Y3 356 aa5.45□□□□□ -1.54
TMEM39A-206ENST00000473684 VPS36Q86VN1 386 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms