RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 POC1B-GALNT4F8VUJ3 575 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 MAP3K7O43318 606 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 LIASO43766 372 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 TOM1O60784 492 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 RRM1P23921 792 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 CTCFP49711 727 aaPredicted RBP6.46□□□□□ -1.38
HERC4-209ENST00000473533 YWHAEP62258 255 aaKnown RBP6.46□□□□□ -1.38
HERC4-209ENST00000473533 ROR2Q01974 943 aaKnown RBP6.46□□□□□ -1.38
HERC4-209ENST00000473533 HIF1AQ16665 826 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 CHSY1Q86X52 802 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 KSR1Q8IVT5 923 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 PPIL6Q8IXY8 311 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 ALLCQ8N6M5 410 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 CYP2W1Q8TAV3 490 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 FEZF2Q8TBJ5 459 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 POMGNT1Q8WZA1 660 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 NKD2Q969F2 451 aaPredicted RBP6.46□□□□□ -1.38
HERC4-209ENST00000473533 C9orf72Q96LT7 481 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 P2RX7Q99572 595 aaKnown RBP6.46□□□□□ -1.38
HERC4-209ENST00000473533 IQCGQ9H095 443 aaKnown RBP6.46□□□□□ -1.38
HERC4-209ENST00000473533 POLIQ9UNA4 740 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 CHKBQ9Y259 395 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 MAGEA13PA6NCF6 341 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 I3L4J1 428 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 GYG2O15488 501 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 GH2P01242 217 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 KRT1P04264 644 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 FDX1P10109 184 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 ATP4AP20648 1035 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 TARSP26639 723 aaKnown RBP6.46□□□□□ -1.38
HERC4-209ENST00000473533 FOXN2P32314 431 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 HSD17B4P51659 736 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 ARSEP51690 589 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 ARFIP2P53365 341 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 VCPP55072 806 aaKnown RBP6.46□□□□□ -1.38
HERC4-209ENST00000473533 PEX3P56589 373 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 WDR4P57081 412 aaKnown RBP6.46□□□□□ -1.38
HERC4-209ENST00000473533 PDCD2Q16342 344 aaPredicted RBP6.46□□□□□ -1.38
HERC4-209ENST00000473533 DBN1Q16643 649 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 DNAL1Q4LDG9 190 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 C1orf220Q5T0J3 134 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 PCNX4Q63HM2 1172 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 TRIM68Q6AZZ1 485 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 PLEKHA7Q6IQ23 1121 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 MON1BQ7L1V2 547 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 RAB3IL1Q8TBN0 382 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 PYROXD1Q8WU10 500 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 ZNF75CPQ92670 426 aaPredicted RBP6.46□□□□□ -1.38
HERC4-209ENST00000473533 ATP6V0A1Q93050 837 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 NR1H4Q96RI1 486 aaPredicted RBP6.46□□□□□ -1.38
HERC4-209ENST00000473533 SIKE1Q9BRV8 207 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 GGT7Q9UJ14 662 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 HAO1Q9UJM8 370 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 STRIP2Q9ULQ0 834 aa6.46□□□□□ -1.38
HERC4-209ENST00000473533 RGPD3A6NKT7 1758 aaPredicted RBP6.45□□□□□ -1.38
HERC4-209ENST00000473533 RGPD4Q7Z3J3 1758 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.45□□□□□ -1.38
HERC4-209ENST00000473533 F8W8V4 182 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 SLC16A4O15374 487 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 MAFGO15525 162 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 EXTL3O43909 919 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 SNUPNO95149 360 aaKnown RBP6.45□□□□□ -1.38
HERC4-209ENST00000473533 GH1P01241 217 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 GYS1P13807 737 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 POLR2BP30876 1174 aaKnown RBP6.45□□□□□ -1.38
HERC4-209ENST00000473533 VPS41P49754 854 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 GHRHRQ02643 423 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 SLC34A1Q06495 639 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 NFIAQ12857 509 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 TRIP13Q15645 432 aaPredicted RBP6.45□□□□□ -1.38
HERC4-209ENST00000473533 HADHQ16836 314 aaKnown RBP6.45□□□□□ -1.38
HERC4-209ENST00000473533 XKR9Q5GH70 373 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 FAM102BQ5T8I3 360 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 ATG16L1Q676U5 607 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 CGB2Q6NT52 195 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 LVRNQ6Q4G3 990 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 POLNQ7Z5Q5 900 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 ABRAQ8N0Z2 381 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 SPICE1Q8N0Z3 855 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 PDIK1LQ8N165 341 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 PIP4K2CQ8TBX8 421 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 CCDC110Q8TBZ0 833 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 ZNF483Q8TF39 744 aaPredicted RBP6.45□□□□□ -1.38
HERC4-209ENST00000473533 ATG4AQ8WYN0 398 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 CCDC127Q96BQ5 260 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 BICD1Q96G01 975 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 BTBD6Q96KE9 485 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 NTPCRQ9BSD7 190 aaKnown RBP6.45□□□□□ -1.38
HERC4-209ENST00000473533 KIAA1683Q9H0B3 1180 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.45□□□□□ -1.38
HERC4-209ENST00000473533 SLC24A3Q9HC58 644 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 MLXIPLQ9NP71 852 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 SORCS3Q9UPU3 1222 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 PCNTO95613 3336 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 TLR3O15455 904 aaKnown RBP6.45□□□□□ -1.38
HERC4-209ENST00000473533 MT-ND3P03897 115 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 ADRB2P07550 413 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 KRT7P08729 469 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 ESRRAP11474 423 aaPredicted RBP6.45□□□□□ -1.38
HERC4-209ENST00000473533 HSPA1LP34931 641 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms