RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 CENPPQ6IPU0 288 aa13.77□□□□□ -0.21
TRAF4-209ENST00000473421 RINT1Q6NUQ1 792 aa13.77□□□□□ -0.21
TRAF4-209ENST00000473421 C1orf186Q6ZWK4 172 aa13.77□□□□□ -0.21
TRAF4-209ENST00000473421 KBTBD6Q86V97 674 aa13.77□□□□□ -0.21
TRAF4-209ENST00000473421 ELMOD1Q8N336 334 aa13.77□□□□□ -0.21
TRAF4-209ENST00000473421 ERMNQ8TAM6 284 aa13.77□□□□□ -0.21
TRAF4-209ENST00000473421 CSGALNACT1Q8TDX6 532 aa13.77□□□□□ -0.21
TRAF4-209ENST00000473421 IER2Q9BTL4 223 aa13.77□□□□□ -0.21
TRAF4-209ENST00000473421 KMT5AQ9NQR1 393 aa13.77□□□□□ -0.21
TRAF4-209ENST00000473421 ANKFY1Q9P2R3 1169 aa13.77□□□□□ -0.21
TRAF4-209ENST00000473421 GREB1Q4ZG55 1949 aa13.76□□□□□ -0.21
TRAF4-209ENST00000473421 FXR2P51116 673 aaKnown RBP eCLIP13.76□□□□□ -0.21
TRAF4-209ENST00000473421 MLLT6P55198 1093 aaPredicted RBP13.76□□□□□ -0.21
TRAF4-209ENST00000473421 CYP4F8P98187 520 aa13.76□□□□□ -0.21
TRAF4-209ENST00000473421 TRIM29Q14134 588 aa13.76□□□□□ -0.21
TRAF4-209ENST00000473421 PPP2R5DQ14738 602 aa13.76□□□□□ -0.21
TRAF4-209ENST00000473421 TTC38Q5R3I4 469 aa13.76□□□□□ -0.21
TRAF4-209ENST00000473421 TCEAL6Q6IPX3 200 aa13.76□□□□□ -0.21
TRAF4-209ENST00000473421 DNAJB7Q7Z6W7 309 aaPredicted RBP13.76□□□□□ -0.21
TRAF4-209ENST00000473421 APPL2Q8NEU8 664 aa13.76□□□□□ -0.21
TRAF4-209ENST00000473421 RIN3Q8TB24 985 aa13.76□□□□□ -0.21
TRAF4-209ENST00000473421 TCEAL3Q969E4 200 aa13.76□□□□□ -0.21
TRAF4-209ENST00000473421 LPIN3Q9BQK8 851 aa13.76□□□□□ -0.21
TRAF4-209ENST00000473421 IL21Q9HBE4 155 aa13.76□□□□□ -0.21
TRAF4-209ENST00000473421 FBRSL1Q9HCM7 1045 aaKnown RBP13.76□□□□□ -0.21
TRAF4-209ENST00000473421 LRWD1Q9UFC0 647 aa13.76□□□□□ -0.21
TRAF4-209ENST00000473421 ZZEF1O43149 2961 aa13.76□□□□□ -0.21
TRAF4-209ENST00000473421 SPEGQ15772 3267 aa13.75□□□□□ -0.21
TRAF4-209ENST00000473421 NPHP3-ACAD11A0A0J9YXS1 232 aa13.75□□□□□ -0.21
TRAF4-209ENST00000473421 MTMR11A4FU01 709 aa13.75□□□□□ -0.21
TRAF4-209ENST00000473421 AARSP49588 968 aaKnown RBP eCLIP13.75□□□□□ -0.21
TRAF4-209ENST00000473421 YWHAHQ04917 246 aaPredicted RBP13.75□□□□□ -0.21
TRAF4-209ENST00000473421 GPR17Q13304 367 aa13.75□□□□□ -0.21
TRAF4-209ENST00000473421 ANKRD1Q15327 319 aa13.75□□□□□ -0.21
TRAF4-209ENST00000473421 GPR158Q5T848 1215 aa13.75□□□□□ -0.21
TRAF4-209ENST00000473421 CEP68Q76N32 757 aa13.75□□□□□ -0.21
TRAF4-209ENST00000473421 WDR5BQ86VZ2 330 aa13.75□□□□□ -0.21
TRAF4-209ENST00000473421 YAF2Q8IY57 180 aa13.75□□□□□ -0.21
TRAF4-209ENST00000473421 IGSF22Q8N9C0 903 aa13.75□□□□□ -0.21
TRAF4-209ENST00000473421 TMEM161BQ8NDZ6 487 aa13.75□□□□□ -0.21
TRAF4-209ENST00000473421 OR10T2Q8NGX3 314 aa13.75□□□□□ -0.21
TRAF4-209ENST00000473421 SNX29Q8TEQ0 813 aa13.75□□□□□ -0.21
TRAF4-209ENST00000473421 C8orf33Q9H7E9 229 aaPredicted RBP13.75□□□□□ -0.21
TRAF4-209ENST00000473421 PCDHB6Q9Y5E3 794 aa13.75□□□□□ -0.21
TRAF4-209ENST00000473421 SPAG17Q6Q759 2223 aa13.75□□□□□ -0.21
TRAF4-209ENST00000473421 TTC26A0AVF1 554 aa13.74□□□□□ -0.21
TRAF4-209ENST00000473421 ANTXRLA6NF34 631 aa13.74□□□□□ -0.21
TRAF4-209ENST00000473421 ATF6P18850 670 aa13.74□□□□□ -0.21
TRAF4-209ENST00000473421 MUTP22033 750 aa13.74□□□□□ -0.21
TRAF4-209ENST00000473421 U2AF2P26368 475 aaKnown RBP eCLIP13.74□□□□□ -0.21
TRAF4-209ENST00000473421 GABRR2P28476 465 aa13.74□□□□□ -0.21
TRAF4-209ENST00000473421 MARCKSP29966 332 aaPredicted RBP13.74□□□□□ -0.21
TRAF4-209ENST00000473421 LRPAP1P30533 357 aa13.74□□□□□ -0.21
TRAF4-209ENST00000473421 RAP1GAPP47736 663 aa13.74□□□□□ -0.21
TRAF4-209ENST00000473421 NEK4P51957 841 aa13.74□□□□□ -0.21
TRAF4-209ENST00000473421 DMP1Q13316 513 aaPredicted RBP13.74□□□□□ -0.21
TRAF4-209ENST00000473421 LRRC32Q14392 662 aa13.74□□□□□ -0.21
TRAF4-209ENST00000473421 HAUS3Q68CZ6 603 aa13.74□□□□□ -0.21
TRAF4-209ENST00000473421 TRIM68Q6AZZ1 485 aa13.74□□□□□ -0.21
TRAF4-209ENST00000473421 FSTL4Q6MZW2 842 aa13.74□□□□□ -0.21
TRAF4-209ENST00000473421 APBB1IPQ7Z5R6 666 aaPredicted RBP13.74□□□□□ -0.21
TRAF4-209ENST00000473421 RALGPS2Q86X27 583 aaPredicted RBP13.74□□□□□ -0.21
TRAF4-209ENST00000473421 LEMD2Q8NC56 503 aa13.74□□□□□ -0.21
TRAF4-209ENST00000473421 STKLD1Q8NE28 680 aa13.74□□□□□ -0.21
TRAF4-209ENST00000473421 KIF12Q96FN5 646 aa13.74□□□□□ -0.21
TRAF4-209ENST00000473421 PLIN2Q99541 437 aa13.74□□□□□ -0.21
TRAF4-209ENST00000473421 NTPCRQ9BSD7 190 aaKnown RBP13.74□□□□□ -0.21
TRAF4-209ENST00000473421 SLC46A2Q9BY10 475 aa13.74□□□□□ -0.21
TRAF4-209ENST00000473421 ATXN3LQ9H3M9 355 aa13.74□□□□□ -0.21
TRAF4-209ENST00000473421 HPS4Q9NQG7 708 aa13.74□□□□□ -0.21
TRAF4-209ENST00000473421 CCL26Q9Y258 94 aa13.74□□□□□ -0.21
TRAF4-209ENST00000473421 NUP210Q8TEM1 1887 aaPredicted RBP13.74□□□□□ -0.21
TRAF4-209ENST00000473421 LACTBL1A8MY62 500 aa13.73□□□□□ -0.21
TRAF4-209ENST00000473421 GIPC1O14908 333 aa13.73□□□□□ -0.21
TRAF4-209ENST00000473421 FAM189A1O60320 539 aa13.73□□□□□ -0.21
TRAF4-209ENST00000473421 TOM1L1O75674 476 aa13.73□□□□□ -0.21
TRAF4-209ENST00000473421 ZNF806P0C7X5 589 aa13.73□□□□□ -0.21
TRAF4-209ENST00000473421 MAPTP10636 758 aaKnown RBP13.73□□□□□ -0.21
TRAF4-209ENST00000473421 HOXB3P14651 431 aaPredicted RBP13.73□□□□□ -0.21
TRAF4-209ENST00000473421 HOXA6P31267 233 aa13.73□□□□□ -0.21
TRAF4-209ENST00000473421 CNR2P34972 360 aa13.73□□□□□ -0.21
TRAF4-209ENST00000473421 EPHB3P54753 998 aa13.73□□□□□ -0.21
TRAF4-209ENST00000473421 ANAPC15P60006 121 aa13.73□□□□□ -0.21
TRAF4-209ENST00000473421 MCL1Q07820 350 aa13.73□□□□□ -0.21
TRAF4-209ENST00000473421 NOLC1Q14978 699 aaKnown RBP eCLIP13.73□□□□□ -0.21
TRAF4-209ENST00000473421 AASDHQ4L235 1098 aaPredicted RBP13.73□□□□□ -0.21
TRAF4-209ENST00000473421 DGKKQ5KSL6 1271 aa13.73□□□□□ -0.21
TRAF4-209ENST00000473421 PLA2G2CQ5R387 149 aa13.73□□□□□ -0.21
TRAF4-209ENST00000473421 STPG1Q5TH74 334 aa13.73□□□□□ -0.21
TRAF4-209ENST00000473421 TMEM150AQ86TG1 271 aa13.73□□□□□ -0.21
TRAF4-209ENST00000473421 CCDC83Q8IWF9 413 aa13.73□□□□□ -0.21
TRAF4-209ENST00000473421 PSMG2Q969U7 264 aa13.73□□□□□ -0.21
TRAF4-209ENST00000473421 C8orf76Q96K31 380 aa13.73□□□□□ -0.21
TRAF4-209ENST00000473421 PNMA5Q96PV4 448 aa13.73□□□□□ -0.21
TRAF4-209ENST00000473421 GPR88Q9GZN0 384 aa13.73□□□□□ -0.21
TRAF4-209ENST00000473421 FOXP1Q9H334 677 aaPredicted RBP13.73□□□□□ -0.21
TRAF4-209ENST00000473421 GKN1Q9NS71 199 aa13.73□□□□□ -0.21
TRAF4-209ENST00000473421 ANGPTL2Q9UKU9 493 aa13.73□□□□□ -0.21
TRAF4-209ENST00000473421 MAFFQ9ULX9 164 aa13.73□□□□□ -0.21
TRAF4-209ENST00000473421 CEP295Q9C0D2 2601 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms