RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-223	ENST00000473345	NRL	P54845	237 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	TTC38	Q5R3I4	469 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	CENPP	Q6IPU0	288 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	FSTL4	Q6MZW2	842 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	TMEM150A	Q86TG1	271 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	LONP2	Q86WA8	852 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	IGSF22	Q8N9C0	903 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	TMEM161B	Q8NDZ6	487 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	KIFAP3	Q92845	792 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	IFT74	Q96LB3	600 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	PNMA5	Q96PV4	448 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	MRPL4	Q9BYD3	311 aa	Known RBP	10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	ARRDC1-AS1	Q9H2J1	176 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	HPS4	Q9NQG7	708 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	ASAH2	Q9NR71	780 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	SLC38A7	Q9NVC3	462 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	NUB1	Q9Y5A7	615 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	PCDHB6	Q9Y5E3	794 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	FRY	Q5TBA9	3013 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	KIF26A	Q9ULI4	1882 aa	Predicted RBP	10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	TSC2	P49815	1807 aa		10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	LACTBL1	A8MY62	500 aa		10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	LRP3	O75074	770 aa		10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	TOP3B	O95985	862 aa	Known RBP	10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	MAPT	P10636	758 aa	Known RBP	10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	U2AF2	P26368	475 aa	Known RBP eCLIP	10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	LRPAP1	P30533	357 aa		10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	RAP1GAP	P47736	663 aa		10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	YARS	P54577	528 aa	Known RBP	10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	MLLT6	P55198	1093 aa	Predicted RBP	10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	PLA2G2C	Q5R387	149 aa		10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	TRIM68	Q6AZZ1	485 aa		10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	IQCE	Q6IPM2	695 aa		10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	SLC39A4	Q6P5W5	647 aa		10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	LRRTM3	Q86VH5	581 aa		10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	WDR5B	Q86VZ2	330 aa		10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	SNX29	Q8TEQ0	813 aa		10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	IER2	Q9BTL4	223 aa		10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	IKZF4	Q9H2S9	585 aa		10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	SLITRK6	Q9H5Y7	841 aa		10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	KMT5A	Q9NQR1	393 aa		10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	TOPORS	Q9NS56	1045 aa	Predicted RBP	10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	ANKFY1	Q9P2R3	1169 aa		10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	RAB23	Q9ULC3	237 aa		10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	CCL26	Q9Y258	94 aa		10.49	□□□□□ -0.73
MCF2L-223	ENST00000473345	GIPC1	O14908	333 aa		10.48	□□□□□ -0.73
MCF2L-223	ENST00000473345	DCLK1	O15075	740 aa		10.48	□□□□□ -0.73
MCF2L-223	ENST00000473345	MUT	P22033	750 aa		10.48	□□□□□ -0.73
MCF2L-223	ENST00000473345	GABRR2	P28476	465 aa		10.48	□□□□□ -0.73
MCF2L-223	ENST00000473345	NMT1	P30419	496 aa	Known RBP	10.48	□□□□□ -0.73
MCF2L-223	ENST00000473345	HOXA6	P31267	233 aa		10.48	□□□□□ -0.73
MCF2L-223	ENST00000473345	KPNA1	P52294	538 aa	Predicted RBP	10.48	□□□□□ -0.73
MCF2L-223	ENST00000473345	YWHAH	Q04917	246 aa	Predicted RBP	10.48	□□□□□ -0.73
MCF2L-223	ENST00000473345	MCL1	Q07820	350 aa		10.48	□□□□□ -0.73
MCF2L-223	ENST00000473345	GPR17	Q13304	367 aa		10.48	□□□□□ -0.73
MCF2L-223	ENST00000473345	NOLC1	Q14978	699 aa	Known RBP eCLIP	10.48	□□□□□ -0.73
MCF2L-223	ENST00000473345	ENOX2	Q16206	610 aa	Known RBP	10.48	□□□□□ -0.73
MCF2L-223	ENST00000473345	CCDC142	Q17RM4	750 aa		10.48	□□□□□ -0.73
MCF2L-223	ENST00000473345	ARSH	Q5FYA8	562 aa		10.48	□□□□□ -0.73
MCF2L-223	ENST00000473345	GPR158	Q5T848	1215 aa		10.48	□□□□□ -0.73
MCF2L-223	ENST00000473345	ERMN	Q8TAM6	284 aa		10.48	□□□□□ -0.73
MCF2L-223	ENST00000473345	FAM84A	Q96KN4	292 aa		10.48	□□□□□ -0.73
MCF2L-223	ENST00000473345	PLIN2	Q99541	437 aa		10.48	□□□□□ -0.73
MCF2L-223	ENST00000473345	NTPCR	Q9BSD7	190 aa	Known RBP	10.48	□□□□□ -0.73
MCF2L-223	ENST00000473345	SLC46A2	Q9BY10	475 aa		10.48	□□□□□ -0.73
MCF2L-223	ENST00000473345	LRWD1	Q9UFC0	647 aa		10.48	□□□□□ -0.73
MCF2L-223	ENST00000473345	WASF3	Q9UPY6	502 aa		10.48	□□□□□ -0.73
MCF2L-223	ENST00000473345	EML5	Q05BV3	1969 aa		10.48	□□□□□ -0.73
MCF2L-223	ENST00000473345	TISP43	B9A030	160 aa		10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	TOM1L1	O75674	476 aa		10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	EPN2	O95208	641 aa		10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	EGF	P01133	1207 aa		10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	ADRB2	P07550	413 aa		10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	NFIC	P08651	508 aa		10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	ARSA	P15289	507 aa		10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	SPINK2	P20155	84 aa		10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	GPR15	P49685	360 aa		10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	NEK4	P51957	841 aa		10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	WNT7B	P56706	349 aa		10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	ANAPC15	P60006	121 aa		10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	DMP1	Q13316	513 aa	Predicted RBP	10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	MAPK8IP2	Q13387	824 aa	Predicted RBP	10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	STPG1	Q5TH74	334 aa		10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	RALGPS2	Q86X27	583 aa	Predicted RBP	10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	CCDC83	Q8IWF9	413 aa		10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	ELMOD1	Q8N336	334 aa		10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	APPL2	Q8NEU8	664 aa		10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	FBXO18	Q8NFZ0	1043 aa		10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	CSGALNACT1	Q8TDX6	532 aa		10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	PSMG2	Q969U7	264 aa		10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	FAM83C	Q9BQN1	747 aa		10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	TCHP	Q9BT92	498 aa		10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	ATXN3L	Q9H3M9	355 aa		10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	C8orf33	Q9H7E9	229 aa	Predicted RBP	10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	TMLHE	Q9NVH6	421 aa		10.47	□□□□□ -0.73
MCF2L-223	ENST00000473345	C1QTNF9B	B2RNN3	333 aa		10.46	□□□□□ -0.73
MCF2L-223	ENST00000473345	TADA3	O75528	432 aa		10.46	□□□□□ -0.73

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