RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 INCA1Q0VD86 236 aa17.21■□□□□ 0.35
PCOLCE-205ENST00000472348 SYCP1Q15431 976 aa17.21■□□□□ 0.35
PCOLCE-205ENST00000472348 USP41Q3LFD5 358 aa17.21■□□□□ 0.35
PCOLCE-205ENST00000472348 TIGD5Q53EQ6 642 aa17.21■□□□□ 0.35
PCOLCE-205ENST00000472348 KLHDC7AQ5VTJ3 777 aa17.21■□□□□ 0.35
PCOLCE-205ENST00000472348 GPR153Q6NV75 609 aa17.21■□□□□ 0.35
PCOLCE-205ENST00000472348 Q7L0L9 218 aa17.21■□□□□ 0.35
PCOLCE-205ENST00000472348 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.21■□□□□ 0.35
PCOLCE-205ENST00000472348 UNC93AQ86WB7 457 aa17.21■□□□□ 0.35
PCOLCE-205ENST00000472348 SENP8Q96LD8 212 aa17.21■□□□□ 0.35
PCOLCE-205ENST00000472348 HERC2P3Q9BVR0 1158 aa17.21■□□□□ 0.35
PCOLCE-205ENST00000472348 TRIM5Q9C035 493 aa17.21■□□□□ 0.35
PCOLCE-205ENST00000472348 SIX2Q9NPC8 291 aa17.21■□□□□ 0.35
PCOLCE-205ENST00000472348 CNTN6Q9UQ52 1028 aa17.21■□□□□ 0.35
PCOLCE-205ENST00000472348 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.21■□□□□ 0.35
PCOLCE-205ENST00000472348 A0A1W2PQJ5 194 aa17.2■□□□□ 0.34
PCOLCE-205ENST00000472348 GRXCR1A8MXD5 290 aa17.2■□□□□ 0.34
PCOLCE-205ENST00000472348 H3BNC9 293 aa17.2■□□□□ 0.34
PCOLCE-205ENST00000472348 SPTLC1O15269 473 aa17.2■□□□□ 0.34
PCOLCE-205ENST00000472348 FGF18O76093 207 aa17.2■□□□□ 0.34
PCOLCE-205ENST00000472348 UCHL3P15374 230 aa17.2■□□□□ 0.34
PCOLCE-205ENST00000472348 WARSP23381 471 aaKnown RBP17.2■□□□□ 0.34
PCOLCE-205ENST00000472348 DNAJB2P25686 324 aa17.2■□□□□ 0.34
PCOLCE-205ENST00000472348 ASPAP45381 313 aa17.2■□□□□ 0.34
PCOLCE-205ENST00000472348 MFAP3P55082 362 aa17.2■□□□□ 0.34
PCOLCE-205ENST00000472348 CREMQ03060 361 aa17.2■□□□□ 0.34
PCOLCE-205ENST00000472348 CUL2Q13617 745 aa17.2■□□□□ 0.34
PCOLCE-205ENST00000472348 MRPL58Q14197 206 aaKnown RBP17.2■□□□□ 0.34
PCOLCE-205ENST00000472348 BMS1Q14692 1282 aaKnown RBP17.2■□□□□ 0.34
PCOLCE-205ENST00000472348 PHLDB3Q6NSJ2 640 aa17.2■□□□□ 0.34
PCOLCE-205ENST00000472348 DSTYKQ6XUX3 929 aa17.2■□□□□ 0.34
PCOLCE-205ENST00000472348 NEK11Q8NG66 645 aa17.2■□□□□ 0.34
PCOLCE-205ENST00000472348 NAA15Q9BXJ9 866 aaKnown RBP17.2■□□□□ 0.34
PCOLCE-205ENST00000472348 NUCKS1Q9H1E3 243 aaKnown RBP17.2■□□□□ 0.34
PCOLCE-205ENST00000472348 APOBEC3GQ9HC16 384 aaKnown RBP17.2■□□□□ 0.34
PCOLCE-205ENST00000472348 CEP72Q9P209 647 aa17.2■□□□□ 0.34
PCOLCE-205ENST00000472348 YBX2Q9Y2T7 364 aaKnown RBP17.2■□□□□ 0.34
PCOLCE-205ENST00000472348 PRG3Q9Y2Y8 225 aaPredicted RBP17.2■□□□□ 0.34
PCOLCE-205ENST00000472348 SNX9Q9Y5X1 595 aa17.2■□□□□ 0.34
PCOLCE-205ENST00000472348 CYB561D2O14569 222 aa17.19■□□□□ 0.34
PCOLCE-205ENST00000472348 TRIM21P19474 475 aaKnown RBP17.19■□□□□ 0.34
PCOLCE-205ENST00000472348 SOWAHAQ2M3V2 549 aa17.19■□□□□ 0.34
PCOLCE-205ENST00000472348 SPECC1LQ69YQ0 1117 aa17.19■□□□□ 0.34
PCOLCE-205ENST00000472348 ANKS3Q6ZW76 656 aa17.19■□□□□ 0.34
PCOLCE-205ENST00000472348 METTL23Q86XA0 190 aa17.19■□□□□ 0.34
PCOLCE-205ENST00000472348 VSTM4Q8IW00 320 aa17.19■□□□□ 0.34
PCOLCE-205ENST00000472348 UBR7Q8N806 425 aa17.19■□□□□ 0.34
PCOLCE-205ENST00000472348 PIK3R5Q8WYR1 880 aa17.19■□□□□ 0.34
PCOLCE-205ENST00000472348 TIFAQ96CG3 184 aa17.19■□□□□ 0.34
PCOLCE-205ENST00000472348 CRACR2AQ9BSW2 395 aa17.19■□□□□ 0.34
PCOLCE-205ENST00000472348 TTYH3Q9C0H2 523 aa17.19■□□□□ 0.34
PCOLCE-205ENST00000472348 GANQ9H2C0 597 aa17.19■□□□□ 0.34
PCOLCE-205ENST00000472348 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.19■□□□□ 0.34
PCOLCE-205ENST00000472348 HCSTQ9UBK5 93 aa17.19■□□□□ 0.34
PCOLCE-205ENST00000472348 BACE2Q9Y5Z0 518 aa17.19■□□□□ 0.34
PCOLCE-205ENST00000472348 H7C4K7 107 aa17.18■□□□□ 0.34
PCOLCE-205ENST00000472348 NOL4O94818 638 aa17.18■□□□□ 0.34
PCOLCE-205ENST00000472348 ITGB1P05556 798 aa17.18■□□□□ 0.34
PCOLCE-205ENST00000472348 CTNNB1P35222 781 aa17.18■□□□□ 0.34
PCOLCE-205ENST00000472348 ZNF75DP51815 510 aa17.18■□□□□ 0.34
PCOLCE-205ENST00000472348 DSG1Q02413 1049 aa17.18■□□□□ 0.34
PCOLCE-205ENST00000472348 SMARCB1Q12824 385 aa17.18■□□□□ 0.34
PCOLCE-205ENST00000472348 PPP2R2DQ66LE6 453 aa17.18■□□□□ 0.34
PCOLCE-205ENST00000472348 TMEM173Q86WV6 379 aaPredicted RBP17.18■□□□□ 0.34
PCOLCE-205ENST00000472348 PPM1KQ8N3J5 372 aa17.18■□□□□ 0.34
PCOLCE-205ENST00000472348 KLHL23Q8NBE8 558 aa17.18■□□□□ 0.34
PCOLCE-205ENST00000472348 SHC3Q92529 594 aa17.18■□□□□ 0.34
PCOLCE-205ENST00000472348 ACBD6Q9BR61 282 aa17.18■□□□□ 0.34
PCOLCE-205ENST00000472348 TTPALQ9BTX7 342 aa17.18■□□□□ 0.34
PCOLCE-205ENST00000472348 STK33Q9BYT3 514 aa17.18■□□□□ 0.34
PCOLCE-205ENST00000472348 GPR62Q9BZJ7 368 aa17.18■□□□□ 0.34
PCOLCE-205ENST00000472348 NGRNQ9NPE2 291 aaKnown RBP17.18■□□□□ 0.34
PCOLCE-205ENST00000472348 LMCD1Q9NZU5 365 aa17.18■□□□□ 0.34
PCOLCE-205ENST00000472348 KIAA1257Q9ULG3 409 aa17.18■□□□□ 0.34
PCOLCE-205ENST00000472348 BARX2Q9UMQ3 279 aaPredicted RBP17.18■□□□□ 0.34
PCOLCE-205ENST00000472348 AP5Z1O43299 807 aa17.17■□□□□ 0.34
PCOLCE-205ENST00000472348 TBC1D4O60343 1298 aa17.17■□□□□ 0.34
PCOLCE-205ENST00000472348 CTSAP10619 480 aa17.17■□□□□ 0.34
PCOLCE-205ENST00000472348 PCSK1P29120 753 aa17.17■□□□□ 0.34
PCOLCE-205ENST00000472348 PBX2P40425 430 aa17.17■□□□□ 0.34
PCOLCE-205ENST00000472348 BRCC3P46736 316 aa17.17■□□□□ 0.34
PCOLCE-205ENST00000472348 YWHAHQ04917 246 aaPredicted RBP17.17■□□□□ 0.34
PCOLCE-205ENST00000472348 ARID5BQ14865 1188 aa17.17■□□□□ 0.34
PCOLCE-205ENST00000472348 FAM171A1Q5VUB5 890 aa17.17■□□□□ 0.34
PCOLCE-205ENST00000472348 KIAA0319Q5VV43 1072 aa17.17■□□□□ 0.34
PCOLCE-205ENST00000472348 THEM5Q8N1Q8 247 aa17.17■□□□□ 0.34
PCOLCE-205ENST00000472348 PDCL2Q8N4E4 241 aa17.17■□□□□ 0.34
PCOLCE-205ENST00000472348 DEFB123Q8N688 67 aa17.17■□□□□ 0.34
PCOLCE-205ENST00000472348 SPPL3Q8TCT6 385 aa17.17■□□□□ 0.34
PCOLCE-205ENST00000472348 BCL7CQ8WUZ0 217 aaPredicted RBP17.17■□□□□ 0.34
PCOLCE-205ENST00000472348 TATDN2Q93075 761 aa17.17■□□□□ 0.34
PCOLCE-205ENST00000472348 FAM84AQ96KN4 292 aa17.17■□□□□ 0.34
PCOLCE-205ENST00000472348 FAM161BQ96MY7 647 aa17.17■□□□□ 0.34
PCOLCE-205ENST00000472348 PI4K2AQ9BTU6 479 aa17.17■□□□□ 0.34
PCOLCE-205ENST00000472348 LSM14BQ9BX40 385 aaKnown RBP17.17■□□□□ 0.34
PCOLCE-205ENST00000472348 ZBP1Q9H171 429 aa17.17■□□□□ 0.34
PCOLCE-205ENST00000472348 FNIP2Q9P278 1114 aa17.17■□□□□ 0.34
PCOLCE-205ENST00000472348 MAFFQ9ULX9 164 aa17.17■□□□□ 0.34
PCOLCE-205ENST00000472348 L1RE1Q9UN81 338 aa17.17■□□□□ 0.34
PCOLCE-205ENST00000472348 OR6C75A6NL08 312 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms