RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 DPH6Q7L8W6 267 aa13.24□□□□□ -0.29
PRKCB-205ENST00000472066 METTL23Q86XA0 190 aa13.24□□□□□ -0.29
PRKCB-205ENST00000472066 AOPEPQ8N6M6 819 aa13.24□□□□□ -0.29
PRKCB-205ENST00000472066 FBXL13Q8NEE6 735 aa13.24□□□□□ -0.29
PRKCB-205ENST00000472066 TAF4BQ92750 862 aa13.24□□□□□ -0.29
PRKCB-205ENST00000472066 SEMA4DQ92854 862 aa13.24□□□□□ -0.29
PRKCB-205ENST00000472066 PPP2R3CQ969Q6 453 aa13.24□□□□□ -0.29
PRKCB-205ENST00000472066 ELMO3Q96BJ8 720 aa13.24□□□□□ -0.29
PRKCB-205ENST00000472066 CLSTN3Q9BQT9 956 aa13.24□□□□□ -0.29
PRKCB-205ENST00000472066 IGFLR1Q9H665 355 aa13.24□□□□□ -0.29
PRKCB-205ENST00000472066 VRTNQ9H8Y1 702 aa13.24□□□□□ -0.29
PRKCB-205ENST00000472066 RAB20Q9NX57 234 aa13.24□□□□□ -0.29
PRKCB-205ENST00000472066 DSEQ9UL01 958 aa13.24□□□□□ -0.29
PRKCB-205ENST00000472066 COQ4Q9Y3A0 265 aa13.24□□□□□ -0.29
PRKCB-205ENST00000472066 BACE2Q9Y5Z0 518 aa13.24□□□□□ -0.29
PRKCB-205ENST00000472066 NLRC5Q86WI3 1866 aa13.24□□□□□ -0.29
PRKCB-205ENST00000472066 SMTNL1A8MU46 457 aa13.23□□□□□ -0.29
PRKCB-205ENST00000472066 KCNJ18B7U540 433 aa13.23□□□□□ -0.29
PRKCB-205ENST00000472066 H7C4K7 107 aa13.23□□□□□ -0.29
PRKCB-205ENST00000472066 PMM2O15305 246 aa13.23□□□□□ -0.29
PRKCB-205ENST00000472066 CLASP2O75122 1294 aaKnown RBP13.23□□□□□ -0.29
PRKCB-205ENST00000472066 LRRN2O75325 713 aa13.23□□□□□ -0.29
PRKCB-205ENST00000472066 RPL17P18621 184 aaKnown RBP13.23□□□□□ -0.29
PRKCB-205ENST00000472066 EEF1GP26641 437 aaKnown RBP13.23□□□□□ -0.29
PRKCB-205ENST00000472066 KLRC2P26717 231 aa13.23□□□□□ -0.29
PRKCB-205ENST00000472066 GTF2F1P35269 517 aaKnown RBP eCLIP13.23□□□□□ -0.29
PRKCB-205ENST00000472066 MTIF2P46199 727 aaKnown RBP13.23□□□□□ -0.29
PRKCB-205ENST00000472066 KCNJ12Q14500 433 aa13.23□□□□□ -0.29
PRKCB-205ENST00000472066 DUSP6Q16828 381 aa13.23□□□□□ -0.29
PRKCB-205ENST00000472066 SOWAHAQ2M3V2 549 aa13.23□□□□□ -0.29
PRKCB-205ENST00000472066 ZNF699Q32M78 642 aa13.23□□□□□ -0.29
PRKCB-205ENST00000472066 CTXN3Q4LDR2 81 aa13.23□□□□□ -0.29
PRKCB-205ENST00000472066 TCP11X2Q5H9J9 407 aa13.23□□□□□ -0.29
PRKCB-205ENST00000472066 OVOS1Q6IE37 1185 aa13.23□□□□□ -0.29
PRKCB-205ENST00000472066 RSPO2Q6UXX9 243 aaPredicted RBP13.23□□□□□ -0.29
PRKCB-205ENST00000472066 LIMS2Q7Z4I7 341 aa13.23□□□□□ -0.29
PRKCB-205ENST00000472066 DHX40Q8IX18 779 aaKnown RBP13.23□□□□□ -0.29
PRKCB-205ENST00000472066 PDCL2Q8N4E4 241 aa13.23□□□□□ -0.29
PRKCB-205ENST00000472066 TOP6BLQ8N6T0 577 aa13.23□□□□□ -0.29
PRKCB-205ENST00000472066 PPM1EQ8WY54 764 aa13.23□□□□□ -0.29
PRKCB-205ENST00000472066 MMS19Q96T76 1030 aa13.23□□□□□ -0.29
PRKCB-205ENST00000472066 CDCA3Q99618 268 aaPredicted RBP13.23□□□□□ -0.29
PRKCB-205ENST00000472066 PI4K2AQ9BTU6 479 aa13.23□□□□□ -0.29
PRKCB-205ENST00000472066 MTRRQ9UBK8 725 aa13.23□□□□□ -0.29
PRKCB-205ENST00000472066 NXF1Q9UBU9 619 aaKnown RBP13.23□□□□□ -0.29
PRKCB-205ENST00000472066 L1RE1Q9UN81 338 aa13.23□□□□□ -0.29
PRKCB-205ENST00000472066 COL4A4P53420 1690 aaPredicted RBP13.23□□□□□ -0.29
PRKCB-205ENST00000472066 ANK1P16157 1881 aa13.23□□□□□ -0.29
PRKCB-205ENST00000472066 PLXNA4Q9HCM2 1894 aa13.23□□□□□ -0.29
PRKCB-205ENST00000472066 P4HA2O15460 535 aa13.22□□□□□ -0.29
PRKCB-205ENST00000472066 ADAM12O43184 909 aa13.22□□□□□ -0.29
PRKCB-205ENST00000472066 N4BP1O75113 896 aaKnown RBP13.22□□□□□ -0.29
PRKCB-205ENST00000472066 ASS1P00966 412 aaKnown RBP13.22□□□□□ -0.29
PRKCB-205ENST00000472066 ADH1AP07327 375 aa13.22□□□□□ -0.29
PRKCB-205ENST00000472066 FAM163BP0C2L3 166 aa13.22□□□□□ -0.29
PRKCB-205ENST00000472066 NDUFV1P49821 464 aa13.22□□□□□ -0.29
PRKCB-205ENST00000472066 TNNC1P63316 161 aa13.22□□□□□ -0.29
PRKCB-205ENST00000472066 MYL7Q01449 175 aa13.22□□□□□ -0.29
PRKCB-205ENST00000472066 IQCB1Q15051 598 aa13.22□□□□□ -0.29
PRKCB-205ENST00000472066 ZNF667Q5HYK9 610 aa13.22□□□□□ -0.29
PRKCB-205ENST00000472066 SPOPLQ6IQ16 392 aa13.22□□□□□ -0.29
PRKCB-205ENST00000472066 SLC8B1Q6J4K2 584 aa13.22□□□□□ -0.29
PRKCB-205ENST00000472066 ZNF280DQ6N043 979 aa13.22□□□□□ -0.29
PRKCB-205ENST00000472066 GLYCTKQ8IVS8 523 aa13.22□□□□□ -0.29
PRKCB-205ENST00000472066 TMEM86AQ8N2M4 240 aa13.22□□□□□ -0.29
PRKCB-205ENST00000472066 SLC22A17Q8WUG5 538 aa13.22□□□□□ -0.29
PRKCB-205ENST00000472066 TUBGCP2Q9BSJ2 902 aa13.22□□□□□ -0.29
PRKCB-205ENST00000472066 OXCT2Q9BYC2 517 aaPredicted RBP13.22□□□□□ -0.29
PRKCB-205ENST00000472066 HSD3B7Q9H2F3 369 aa13.22□□□□□ -0.29
PRKCB-205ENST00000472066 APOBEC3GQ9HC16 384 aaKnown RBP13.22□□□□□ -0.29
PRKCB-205ENST00000472066 CBX8Q9HC52 389 aa13.22□□□□□ -0.29
PRKCB-205ENST00000472066 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.22□□□□□ -0.297e-11■■■■■ 260.8
PRKCB-205ENST00000472066 FBXL5Q9UKA1 691 aa13.22□□□□□ -0.29
PRKCB-205ENST00000472066 POLIQ9UNA4 740 aa13.22□□□□□ -0.29
PRKCB-205ENST00000472066 CDY1Q9Y6F8 540 aa13.22□□□□□ -0.29
PRKCB-205ENST00000472066 PDCD11Q14690 1871 aaKnown RBP13.22□□□□□ -0.29
PRKCB-205ENST00000472066 OR6C75A6NL08 312 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 GABRDO14764 452 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 NCK2O43639 380 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 TACC1O75410 805 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 CLSTN1O94985 981 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 CAVIN2O95810 425 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 ZNF18P17022 549 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 OR1D2P34982 312 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 CLCN4P51793 760 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 CETN1Q12798 172 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 ADAM15Q13444 863 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 KCNC3Q14003 757 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 RAB33AQ14088 237 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 MAN2A1Q16706 1144 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 VWA3BQ502W6 1294 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 WDR44Q5JSH3 913 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 MIIPQ5JXC2 388 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 LRSAM1Q6UWE0 723 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 PPFIBP1Q86W92 1011 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 PALB2Q86YC2 1186 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 ADGRF2Q8IZF7 708 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 THEM5Q8N1Q8 247 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 EFHBQ8N7U6 833 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 CCDC150Q8NCX0 1101 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms