RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 GDE1Q9NZC3 331 aa12.47□□□□□ -0.41
COL4A3-205ENST00000471862 CA14Q9ULX7 337 aa12.47□□□□□ -0.41
COL4A3-205ENST00000471862 YIPF1Q9Y548 306 aa12.47□□□□□ -0.41
COL4A3-205ENST00000471862 COL4A3Q01955 1670 aa12.46□□□□□ -0.41
COL4A3-205ENST00000471862 MTMR11A4FU01 709 aa12.46□□□□□ -0.41
COL4A3-205ENST00000471862 LDHAP00338 332 aaKnown RBP12.46□□□□□ -0.41
COL4A3-205ENST00000471862 FCARP24071 287 aa12.46□□□□□ -0.41
COL4A3-205ENST00000471862 HOXD13P35453 343 aa12.46□□□□□ -0.41
COL4A3-205ENST00000471862 TAF6P49848 677 aa12.46□□□□□ -0.41
COL4A3-205ENST00000471862 MRE11P49959 708 aa12.46□□□□□ -0.41
COL4A3-205ENST00000471862 GPC5P78333 572 aa12.46□□□□□ -0.41
COL4A3-205ENST00000471862 EHHADHQ08426 723 aa12.46□□□□□ -0.41
COL4A3-205ENST00000471862 ATL3Q6DD88 541 aa12.46□□□□□ -0.41
COL4A3-205ENST00000471862 CENPPQ6IPU0 288 aa12.46□□□□□ -0.41
COL4A3-205ENST00000471862 PHLDB3Q6NSJ2 640 aa12.46□□□□□ -0.41
COL4A3-205ENST00000471862 EPM2AIP1Q7L775 607 aaPredicted RBP12.46□□□□□ -0.41
COL4A3-205ENST00000471862 HS6ST3Q8IZP7 471 aa12.46□□□□□ -0.41
COL4A3-205ENST00000471862 IQUBQ8NA54 791 aa12.46□□□□□ -0.41
COL4A3-205ENST00000471862 OR10T2Q8NGX3 314 aa12.46□□□□□ -0.41
COL4A3-205ENST00000471862 CXorf38Q8TB03 319 aa12.46□□□□□ -0.41
COL4A3-205ENST00000471862 HPS3Q969F9 1004 aa12.46□□□□□ -0.41
COL4A3-205ENST00000471862 MCRS1Q96EZ8 462 aa12.46□□□□□ -0.41
COL4A3-205ENST00000471862 PGLYRP2Q96PD5 576 aa12.46□□□□□ -0.41
COL4A3-205ENST00000471862 C7orf25Q9BPX7 421 aa12.46□□□□□ -0.41
COL4A3-205ENST00000471862 RTP3Q9BQQ7 232 aa12.46□□□□□ -0.41
COL4A3-205ENST00000471862 LRRC3Q9BY71 257 aa12.46□□□□□ -0.41
COL4A3-205ENST00000471862 LRRC27Q9C0I9 530 aa12.46□□□□□ -0.41
COL4A3-205ENST00000471862 DNAJC25Q9H1X3 360 aa12.46□□□□□ -0.41
COL4A3-205ENST00000471862 ARHGEF3Q9NR81 526 aa12.46□□□□□ -0.41
COL4A3-205ENST00000471862 PCDHA7Q9UN72 937 aa12.46□□□□□ -0.41
COL4A3-205ENST00000471862 GTF3C3Q9Y5Q9 886 aa12.46□□□□□ -0.41
COL4A3-205ENST00000471862 COL4A2P08572 1712 aa12.45□□□□□ -0.42
COL4A3-205ENST00000471862 MIA3Q5JRA6 1907 aa12.45□□□□□ -0.42
COL4A3-205ENST00000471862 ZNF197O14709 1029 aa12.45□□□□□ -0.42
COL4A3-205ENST00000471862 EIF3DO15371 548 aaKnown RBP eCLIP12.45□□□□□ -0.42
COL4A3-205ENST00000471862 EXTL3O43909 919 aa12.45□□□□□ -0.42
COL4A3-205ENST00000471862 ECI2O75521 394 aa12.45□□□□□ -0.42
COL4A3-205ENST00000471862 HSP90AA1P07900 732 aaKnown RBP12.45□□□□□ -0.42
COL4A3-205ENST00000471862 DUSP4Q13115 394 aa12.45□□□□□ -0.42
COL4A3-205ENST00000471862 FOXD4L6Q3SYB3 417 aaPredicted RBP12.45□□□□□ -0.42
COL4A3-205ENST00000471862 RESP18Q5W5W9 173 aa12.45□□□□□ -0.42
COL4A3-205ENST00000471862 FOXD4L3Q6VB84 417 aaPredicted RBP12.45□□□□□ -0.42
COL4A3-205ENST00000471862 PDZD4Q76G19 769 aaPredicted RBP12.45□□□□□ -0.42
COL4A3-205ENST00000471862 TMC8Q8IU68 726 aa12.45□□□□□ -0.42
COL4A3-205ENST00000471862 CCDC105Q8IYK2 499 aa12.45□□□□□ -0.42
COL4A3-205ENST00000471862 SYCP3Q8IZU3 236 aa12.45□□□□□ -0.42
COL4A3-205ENST00000471862 TTC9BQ8N6N2 239 aa12.45□□□□□ -0.42
COL4A3-205ENST00000471862 C1orf127Q8N9H9 656 aa12.45□□□□□ -0.42
COL4A3-205ENST00000471862 LEMD2Q8NC56 503 aa12.45□□□□□ -0.42
COL4A3-205ENST00000471862 KXD1Q9BQD3 176 aa12.45□□□□□ -0.42
COL4A3-205ENST00000471862 PLA2G2FQ9BZM2 168 aa12.45□□□□□ -0.42
COL4A3-205ENST00000471862 IRF2BPLQ9H1B7 796 aa12.45□□□□□ -0.42
COL4A3-205ENST00000471862 TBC1D17Q9HA65 648 aa12.45□□□□□ -0.42
COL4A3-205ENST00000471862 MAGEF1Q9HAY2 307 aa12.45□□□□□ -0.42
COL4A3-205ENST00000471862 RBAKQ9NYW8 714 aaPredicted RBP12.45□□□□□ -0.42
COL4A3-205ENST00000471862 DLGAP2Q9P1A6 1054 aa12.45□□□□□ -0.42
COL4A3-205ENST00000471862 HSFX1Q9UBD0 423 aa12.45□□□□□ -0.42
COL4A3-205ENST00000471862 RCOR1Q9UKL0 485 aa12.45□□□□□ -0.42
COL4A3-205ENST00000471862 DSEQ9UL01 958 aa12.45□□□□□ -0.42
COL4A3-205ENST00000471862 GOLGA8IPA6NC78 632 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 GOLGA8JA6NMD2 632 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 H0Y858 1186 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 CYB561D2O14569 222 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 KIAA0391O15091 583 aaKnown RBP12.44□□□□□ -0.42
COL4A3-205ENST00000471862 POLR2DO15514 142 aaKnown RBP12.44□□□□□ -0.42
COL4A3-205ENST00000471862 STARD6P59095 220 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 ASIC1P78348 528 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 AMPD3Q01432 767 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 DNM1Q05193 864 aaKnown RBP12.44□□□□□ -0.42
COL4A3-205ENST00000471862 SV2CQ496J9 727 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 CYP4A22Q5TCH4 519 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 SCARA3Q6AZY7 606 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 TANGO2Q6ICL3 276 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 IQCEQ6IPM2 695 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 ARMCX5Q6P1M9 558 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 UNC13DQ70J99 1090 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 GPD1LQ8N335 351 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 ELMOD1Q8N336 334 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 ATAD1Q8NBU5 361 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 SHKBP1Q8TBC3 707 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 ZNF507Q8TCN5 953 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 ELSPBP1Q96BH3 223 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 ZNF512Q96ME7 567 aaPredicted RBP12.44□□□□□ -0.42
COL4A3-205ENST00000471862 ZNF560Q96MR9 790 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 ASB16Q96NS5 453 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 PYM1Q9BRP8 204 aaKnown RBP12.44□□□□□ -0.42
COL4A3-205ENST00000471862 DDX23Q9BUQ8 820 aaKnown RBP12.44□□□□□ -0.42
COL4A3-205ENST00000471862 ZCWPW1Q9H0M4 648 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 PCIF1Q9H4Z3 704 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 FAM86C1Q9NVL1 165 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 USP34Q70CQ2 3546 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 MYO15AQ9UKN7 3530 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 DENND4CQ5VZ89 1909 aa12.44□□□□□ -0.42
COL4A3-205ENST00000471862 NUP210Q8TEM1 1887 aaPredicted RBP12.44□□□□□ -0.42
COL4A3-205ENST00000471862 DMDP11532 3685 aa12.43□□□□□ -0.42
COL4A3-205ENST00000471862 KPNA7A9QM74 516 aa12.43□□□□□ -0.42
COL4A3-205ENST00000471862 TGFB1I1O43294 461 aa12.43□□□□□ -0.42
COL4A3-205ENST00000471862 ITGB3P05106 788 aa12.43□□□□□ -0.42
COL4A3-205ENST00000471862 CASP1P29466 404 aa12.43□□□□□ -0.42
COL4A3-205ENST00000471862 POLR2BP30876 1174 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms