RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 UAP1L1Q3KQV9 507 aa5.08□□□□□ -1.6
RBM39-228ENST00000471635 PPP4R3AQ6IN85 833 aa5.08□□□□□ -1.6
RBM39-228ENST00000471635 PNMA8AQ86V59 439 aaPredicted RBP5.08□□□□□ -1.6
RBM39-228ENST00000471635 AOPEPQ8N6M6 819 aa5.08□□□□□ -1.6
RBM39-228ENST00000471635 FBXO41Q8TF61 875 aa5.08□□□□□ -1.6
RBM39-228ENST00000471635 SNX19Q92543 992 aa5.08□□□□□ -1.6
RBM39-228ENST00000471635 UROC1Q96N76 676 aa5.08□□□□□ -1.6
RBM39-228ENST00000471635 DMRTA2Q96SC8 542 aa5.08□□□□□ -1.6
RBM39-228ENST00000471635 VRK1Q99986 396 aaPredicted RBP5.08□□□□□ -1.6
RBM39-228ENST00000471635 CPNE5Q9HCH3 593 aa5.08□□□□□ -1.6
RBM39-228ENST00000471635 CALCOCO1Q9P1Z2 691 aa5.08□□□□□ -1.6
RBM39-228ENST00000471635 SERPINB13Q9UIV8 391 aa5.08□□□□□ -1.6
RBM39-228ENST00000471635 SHTN1A0MZ66 631 aa5.07□□□□□ -1.6
RBM39-228ENST00000471635 FZD9O00144 591 aa5.07□□□□□ -1.6
RBM39-228ENST00000471635 PROM1O43490 865 aa5.07□□□□□ -1.6
RBM39-228ENST00000471635 PPP3CBP16298 524 aa5.07□□□□□ -1.6
RBM39-228ENST00000471635 CDK11BP21127 795 aaKnown RBP5.07□□□□□ -1.6
RBM39-228ENST00000471635 GRIA3P42263 894 aa5.07□□□□□ -1.6
RBM39-228ENST00000471635 CDKN1CP49918 316 aaPredicted RBP5.07□□□□□ -1.6
RBM39-228ENST00000471635 PIGFQ07326 219 aa5.07□□□□□ -1.6
RBM39-228ENST00000471635 TSTD2Q5T7W7 516 aa5.07□□□□□ -1.6
RBM39-228ENST00000471635 TAPT1Q6NXT6 567 aa5.07□□□□□ -1.6
RBM39-228ENST00000471635 GRASPQ7Z6J2 395 aaPredicted RBP5.07□□□□□ -1.6
RBM39-228ENST00000471635 B3GALNT2Q8NCR0 500 aa5.07□□□□□ -1.6
RBM39-228ENST00000471635 MYCBPAPQ8TBZ2 947 aa5.07□□□□□ -1.6
RBM39-228ENST00000471635 LRIG1Q96JA1 1093 aa5.07□□□□□ -1.6
RBM39-228ENST00000471635 TRIB1Q96RU8 372 aa5.07□□□□□ -1.6
RBM39-228ENST00000471635 SMOQ99835 787 aa5.07□□□□□ -1.6
RBM39-228ENST00000471635 ARPP21Q9UBL0 812 aaPredicted RBP5.07□□□□□ -1.6
RBM39-228ENST00000471635 CCDC151A5D8V7 595 aa5.06□□□□□ -1.6
RBM39-228ENST00000471635 ADM5C9JUS6 153 aa5.06□□□□□ -1.6
RBM39-228ENST00000471635 E9PLN8 166 aa5.06□□□□□ -1.6
RBM39-228ENST00000471635 GABRDO14764 452 aa5.06□□□□□ -1.6
RBM39-228ENST00000471635 MAPK7Q13164 816 aa5.06□□□□□ -1.6
RBM39-228ENST00000471635 TXNRD1Q16881 649 aa5.06□□□□□ -1.6
RBM39-228ENST00000471635 NBPF8Q3BBV2 869 aa5.06□□□□□ -1.6
RBM39-228ENST00000471635 KHDC1Q4VXA5 237 aaKnown RBP5.06□□□□□ -1.6
RBM39-228ENST00000471635 RNF187Q5TA31 235 aaPredicted RBP5.06□□□□□ -1.6
RBM39-228ENST00000471635 SLC30A10Q6XR72 485 aa5.06□□□□□ -1.6
RBM39-228ENST00000471635 PGBD1Q96JS3 809 aa5.06□□□□□ -1.6
RBM39-228ENST00000471635 VKORC1Q9BQB6 163 aa5.06□□□□□ -1.6
RBM39-228ENST00000471635 ENTPD2Q9Y5L3 495 aa5.06□□□□□ -1.6
RBM39-228ENST00000471635 IKBKBO14920 756 aa5.05□□□□□ -1.6
RBM39-228ENST00000471635 PROP1O75360 226 aa5.05□□□□□ -1.6
RBM39-228ENST00000471635 RPLP2P05387 115 aaKnown RBP5.05□□□□□ -1.6
RBM39-228ENST00000471635 ELFN1P0C7U0 828 aa5.05□□□□□ -1.6
RBM39-228ENST00000471635 MALP21145 153 aa5.05□□□□□ -1.6
RBM39-228ENST00000471635 GPD1P21695 349 aa5.05□□□□□ -1.6
RBM39-228ENST00000471635 NPTX2P47972 431 aa5.05□□□□□ -1.6
RBM39-228ENST00000471635 HNRNPMP52272 730 aaKnown RBP eCLIP5.05□□□□□ -1.6
RBM39-228ENST00000471635 PROK1P58294 105 aa5.05□□□□□ -1.6
RBM39-228ENST00000471635 EVA1CP58658 441 aa5.05□□□□□ -1.6
RBM39-228ENST00000471635 PSMC1P62191 440 aaKnown RBP5.05□□□□□ -1.6
RBM39-228ENST00000471635 SNAPC2Q13487 334 aa5.05□□□□□ -1.6
RBM39-228ENST00000471635 PTPRRQ15256 657 aa5.05□□□□□ -1.6
RBM39-228ENST00000471635 PTPN21Q16825 1174 aa5.05□□□□□ -1.6
RBM39-228ENST00000471635 CCDC93Q567U6 631 aa5.05□□□□□ -1.6
RBM39-228ENST00000471635 EFCAB2Q5VUJ9 269 aa5.05□□□□□ -1.6
RBM39-228ENST00000471635 ZNF788Q6ZQV5 615 aa5.05□□□□□ -1.6
RBM39-228ENST00000471635 NSUN6Q8TEA1 469 aaKnown RBP5.05□□□□□ -1.6
RBM39-228ENST00000471635 SLAMF7Q9NQ25 335 aa5.05□□□□□ -1.6
RBM39-228ENST00000471635 MAN1C1Q9NR34 630 aa5.05□□□□□ -1.6
RBM39-228ENST00000471635 ST3GAL5Q9UNP4 418 aa5.05□□□□□ -1.6
RBM39-228ENST00000471635 CFAP20Q9Y6A4 193 aaKnown RBP5.05□□□□□ -1.6
RBM39-228ENST00000471635 SBNO2Q9Y2G9 1366 aa5.04□□□□□ -1.6
RBM39-228ENST00000471635 LRRC14BA6NHZ5 514 aa5.04□□□□□ -1.6
RBM39-228ENST00000471635 LINC00473A8K010 186 aa5.04□□□□□ -1.6
RBM39-228ENST00000471635 ZNF785A8K8V0 405 aa5.04□□□□□ -1.6
RBM39-228ENST00000471635 F2RL2O00254 374 aa5.04□□□□□ -1.6
RBM39-228ENST00000471635 POLRMTO00411 1230 aaKnown RBP5.04□□□□□ -1.6
RBM39-228ENST00000471635 ANXA1P04083 346 aa5.04□□□□□ -1.6
RBM39-228ENST00000471635 KRT85P78386 507 aa5.04□□□□□ -1.6
RBM39-228ENST00000471635 POU6F2P78424 691 aaPredicted RBP5.04□□□□□ -1.6
RBM39-228ENST00000471635 FOXF2Q12947 444 aa5.04□□□□□ -1.6
RBM39-228ENST00000471635 HLXQ14774 488 aaPredicted RBP5.04□□□□□ -1.6
RBM39-228ENST00000471635 ODF1Q14990 250 aa5.04□□□□□ -1.6
RBM39-228ENST00000471635 SLC4A10Q6U841 1118 aa5.04□□□□□ -1.6
RBM39-228ENST00000471635 TMPRSS9Q7Z410 1059 aa5.04□□□□□ -1.6
RBM39-228ENST00000471635 AMIGO2Q86SJ2 522 aa5.04□□□□□ -1.6
RBM39-228ENST00000471635 TTC7BQ86TV6 843 aa5.04□□□□□ -1.6
RBM39-228ENST00000471635 TIMP4Q99727 224 aa5.04□□□□□ -1.6
RBM39-228ENST00000471635 BRD9Q9H8M2 597 aa5.04□□□□□ -1.6
RBM39-228ENST00000471635 NR2E3Q9Y5X4 410 aa5.04□□□□□ -1.6
RBM39-228ENST00000471635 VWC2LB2RUY7 222 aa5.03□□□□□ -1.6
RBM39-228ENST00000471635 E7ENX8 843 aa5.03□□□□□ -1.6
RBM39-228ENST00000471635 F5H697 171 aa5.03□□□□□ -1.6
RBM39-228ENST00000471635 GJB1P08034 283 aa5.03□□□□□ -1.6
RBM39-228ENST00000471635 GNAI3P08754 354 aa5.03□□□□□ -1.6
RBM39-228ENST00000471635 ABCG1P45844 678 aa5.03□□□□□ -1.6
RBM39-228ENST00000471635 PHKA1P46020 1223 aa5.03□□□□□ -1.6
RBM39-228ENST00000471635 ADKP55263 362 aaKnown RBP5.03□□□□□ -1.6
RBM39-228ENST00000471635 GNAI1P63096 354 aa5.03□□□□□ -1.6
RBM39-228ENST00000471635 EXOSC10Q01780 885 aaKnown RBP5.03□□□□□ -1.6
RBM39-228ENST00000471635 DSC2Q02487 901 aa5.03□□□□□ -1.6
RBM39-228ENST00000471635 TAP2Q03519 686 aa5.03□□□□□ -1.6
RBM39-228ENST00000471635 ITIH3Q06033 890 aa5.03□□□□□ -1.6
RBM39-228ENST00000471635 SRRM1Q8IYB3 904 aaKnown RBP5.03□□□□□ -1.6
RBM39-228ENST00000471635 FAM9AQ8IZU1 332 aaPredicted RBP5.03□□□□□ -1.6
RBM39-228ENST00000471635 SH2D3CQ8N5H7 860 aa5.03□□□□□ -1.6
RBM39-228ENST00000471635 PRPF38AQ8NAV1 312 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms