RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 TUFT1Q9NNX1 390 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 SLC38A7Q9NVC3 462 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 SLC8A2Q9UPR5 921 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 INVSQ9Y283 1065 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 KIAA1549LQ6ZVL6 1849 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 THADAQ6YHU6 1953 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 C4orf47A7E2U8 309 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 BTBD18B2RXH4 712 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 DCLK1O15075 740 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 SNPHO15079 494 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 REC8O95072 547 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 VNN2O95498 520 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 GABRR2P28476 465 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 RAP1GAPP47736 663 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 ALDH1A3P47895 512 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 EFNA5P52803 228 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 EPHB3P54753 998 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 EPHA5P54756 1037 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 CYP4F8P98187 520 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 CREB5Q02930 508 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 ZNF252P-AS1Q0IIN9 211 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 FCHO2Q0JRZ9 810 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 CCINQ13939 588 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 ARHGAP29Q52LW3 1261 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 TMC8Q8IU68 726 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 TTC9BQ8N6N2 239 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 LEMD2Q8NC56 503 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 TTC16Q8NEE8 873 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 APPL2Q8NEU8 664 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 TNFRSF25Q93038 417 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 MSANTD3Q96H12 275 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 ZBTB45Q96K62 511 aaPredicted RBP9.97□□□□□ -0.81
CCDC171-204ENST00000470191 ACAP3Q96P50 834 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 MTMR9Q96QG7 549 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 HHIPQ96QV1 700 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 ACO2Q99798 780 aaKnown RBP9.97□□□□□ -0.81
CCDC171-204ENST00000470191 TARS2Q9BW92 718 aaKnown RBP9.97□□□□□ -0.81
CCDC171-204ENST00000470191 DNAJC25Q9H1X3 360 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 TUBGCP4Q9UGJ1 667 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 TNFSF13BQ9Y275 285 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 STK36Q9NRP7 1315 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 OBSL1O75147 1896 aa9.97□□□□□ -0.81
CCDC171-204ENST00000470191 TSC2P49815 1807 aa9.96□□□□□ -0.81
CCDC171-204ENST00000470191 CTDNEP1O95476 244 aa9.96□□□□□ -0.82
CCDC171-204ENST00000470191 PRAMEF12O95522 483 aa9.96□□□□□ -0.82
CCDC171-204ENST00000470191 U2AF2P26368 475 aaKnown RBP eCLIP9.96□□□□□ -0.82
CCDC171-204ENST00000470191 MLLT6P55198 1093 aaPredicted RBP9.96□□□□□ -0.82
CCDC171-204ENST00000470191 PEX3P56589 373 aa9.96□□□□□ -0.82
CCDC171-204ENST00000470191 YWHAHQ04917 246 aaPredicted RBP9.96□□□□□ -0.82
CCDC171-204ENST00000470191 ITPRIPL2Q3MIP1 535 aa9.96□□□□□ -0.82
CCDC171-204ENST00000470191 ARHGAP15Q53QZ3 475 aa9.96□□□□□ -0.82
CCDC171-204ENST00000470191 PLA2G2CQ5R387 149 aa9.96□□□□□ -0.82
CCDC171-204ENST00000470191 KIAA1211LQ6NV74 962 aa9.96□□□□□ -0.82
CCDC171-204ENST00000470191 C1orf228Q6PIY5 440 aa9.96□□□□□ -0.82
CCDC171-204ENST00000470191 ALKAL1Q6UXT8 129 aa9.96□□□□□ -0.82
CCDC171-204ENST00000470191 GAREM2Q75VX8 874 aa9.96□□□□□ -0.82
CCDC171-204ENST00000470191 NECAB1Q8N987 351 aa9.96□□□□□ -0.82
CCDC171-204ENST00000470191 LOXL4Q96JB6 756 aa9.96□□□□□ -0.82
CCDC171-204ENST00000470191 TMEM209Q96SK2 561 aa9.96□□□□□ -0.82
CCDC171-204ENST00000470191 LRRC3Q9BY71 257 aa9.96□□□□□ -0.82
CCDC171-204ENST00000470191 BHMT2Q9H2M3 363 aa9.96□□□□□ -0.82
CCDC171-204ENST00000470191 VPS45Q9NRW7 570 aa9.96□□□□□ -0.82
CCDC171-204ENST00000470191 GKN1Q9NS71 199 aa9.96□□□□□ -0.82
CCDC171-204ENST00000470191 TPCN1Q9ULQ1 816 aa9.96□□□□□ -0.82
CCDC171-204ENST00000470191 PCDHB8Q9UN66 801 aa9.96□□□□□ -0.82
CCDC171-204ENST00000470191 LAMA1P25391 3075 aa9.96□□□□□ -0.82
CCDC171-204ENST00000470191 ADAMTS9Q9P2N4 1935 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 MEFVO15553 781 aaPredicted RBP9.95□□□□□ -0.82
CCDC171-204ENST00000470191 PFKFB2O60825 505 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 RNF40O75150 1001 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 EGFP01133 1207 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 KCNE1P15382 129 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 GBP1P32455 592 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 RPL9P32969 192 aaKnown RBP9.95□□□□□ -0.82
CCDC171-204ENST00000470191 CCT6AP40227 531 aaKnown RBP9.95□□□□□ -0.82
CCDC171-204ENST00000470191 MATR3P43243 847 aaKnown RBP eCLIP9.95□□□□□ -0.82
CCDC171-204ENST00000470191 GUCY2FP51841 1108 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 GUCY1B3Q02153 619 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 PLD1Q13393 1074 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 ACAP1Q15027 740 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 ELF2Q15723 593 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 ECM1Q16610 540 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 UAP1L1Q3KQV9 507 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 PLK5Q496M5 336 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 XKR4Q5GH76 650 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 SH3PXD2AQ5TCZ1 1133 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 TRIM68Q6AZZ1 485 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 FSTL4Q6MZW2 842 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 DSTYKQ6XUX3 929 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 CENPQQ7L2Z9 268 aaPredicted RBP9.95□□□□□ -0.82
CCDC171-204ENST00000470191 DNAJB7Q7Z6W7 309 aaPredicted RBP9.95□□□□□ -0.82
CCDC171-204ENST00000470191 USP37Q86T82 979 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 DIS3L2Q8IYB7 885 aaKnown RBP9.95□□□□□ -0.82
CCDC171-204ENST00000470191 ATAD1Q8NBU5 361 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 ERMNQ8TAM6 284 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 BPIFB1Q8TDL5 484 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 WASF1Q92558 559 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 KIFAP3Q92845 792 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 LPIN3Q9BQK8 851 aa9.95□□□□□ -0.82
CCDC171-204ENST00000470191 MKNK1Q9BUB5 465 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms