RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 KCND2Q9NZV8 630 aa6.39□□□□□ -1.39
SHQ1-205ENST00000468371 MRPS23Q9Y3D9 190 aaKnown RBP6.39□□□□□ -1.39
SHQ1-205ENST00000468371 MYH4Q9Y623 1939 aa6.39□□□□□ -1.39
SHQ1-205ENST00000468371 A0A1B0GTH6 734 aa6.39□□□□□ -1.39
SHQ1-205ENST00000468371 PLS3P13797 630 aa6.39□□□□□ -1.39
SHQ1-205ENST00000468371 HOXB8P17481 243 aaPredicted RBP6.39□□□□□ -1.39
SHQ1-205ENST00000468371 EIF4A3P38919 411 aaKnown RBP6.39□□□□□ -1.39
SHQ1-205ENST00000468371 PRCPP42785 496 aa6.39□□□□□ -1.39
SHQ1-205ENST00000468371 CLK2P49760 499 aaKnown RBP6.39□□□□□ -1.39
SHQ1-205ENST00000468371 GATMP50440 423 aa6.39□□□□□ -1.39
SHQ1-205ENST00000468371 KLHL30Q0D2K2 578 aa6.39□□□□□ -1.39
SHQ1-205ENST00000468371 FAM26FQ5R3K3 315 aa6.39□□□□□ -1.39
SHQ1-205ENST00000468371 CNNM4Q6P4Q7 775 aa6.39□□□□□ -1.39
SHQ1-205ENST00000468371 RSRC2Q7L4I2 434 aaKnown RBP6.39□□□□□ -1.39
SHQ1-205ENST00000468371 DAAM2Q86T65 1068 aa6.39□□□□□ -1.39
SHQ1-205ENST00000468371 PACS2Q86VP3 889 aa6.39□□□□□ -1.39
SHQ1-205ENST00000468371 TDRD5Q8NAT2 981 aaKnown RBP6.39□□□□□ -1.39
SHQ1-205ENST00000468371 DHX38Q92620 1227 aaKnown RBP6.39□□□□□ -1.39
SHQ1-205ENST00000468371 RSRC1Q96IZ7 334 aaKnown RBP6.39□□□□□ -1.39
SHQ1-205ENST00000468371 ZNF560Q96MR9 790 aa6.39□□□□□ -1.39
SHQ1-205ENST00000468371 NECTIN4Q96NY8 510 aa6.39□□□□□ -1.39
SHQ1-205ENST00000468371 CDCA3Q99618 268 aaPredicted RBP6.39□□□□□ -1.39
SHQ1-205ENST00000468371 ELAC1Q9H777 363 aaKnown RBP6.39□□□□□ -1.39
SHQ1-205ENST00000468371 KCNMB3Q9NPA1 279 aa6.39□□□□□ -1.39
SHQ1-205ENST00000468371 LMCD1Q9NZU5 365 aa6.39□□□□□ -1.39
SHQ1-205ENST00000468371 SAMD15Q9P1V8 674 aa6.39□□□□□ -1.39
SHQ1-205ENST00000468371 FBXO2Q9UK22 296 aaPredicted RBP6.39□□□□□ -1.39
SHQ1-205ENST00000468371 UBQLN1Q9UMX0 589 aaKnown RBP6.39□□□□□ -1.39
SHQ1-205ENST00000468371 MYO5AQ9Y4I1 1855 aaKnown RBP6.38□□□□□ -1.39
SHQ1-205ENST00000468371 MBLAC1A4D2B0 266 aaPredicted RBP6.38□□□□□ -1.39
SHQ1-205ENST00000468371 ZNF233A6NK53 670 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 MED24O75448 989 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 RECQL4O94761 1208 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 TCP1P17987 556 aaKnown RBP6.38□□□□□ -1.39
SHQ1-205ENST00000468371 IFNAR2P48551 515 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 FXR2P51116 673 aaKnown RBP eCLIP6.38□□□□□ -1.39
SHQ1-205ENST00000468371 GUCY1A3Q02108 690 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 GRIK3Q13003 919 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 RPS6KA1Q15418 735 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 RPAINQ86UA6 219 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 FLCNQ8NFG4 579 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 ETNPPLQ8TBG4 499 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 N4BP2L2Q92802 583 aaPredicted RBP6.38□□□□□ -1.39
SHQ1-205ENST00000468371 LRRC1Q9BTT6 524 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 PCIF1Q9H4Z3 704 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 ERVK-5Q9HDB9 667 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 DZANK1Q9NVP4 752 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 AGO2Q9UKV8 859 aaKnown RBP6.38□□□□□ -1.39
SHQ1-205ENST00000468371 STK38LQ9Y2H1 464 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 MRPL42Q9Y6G3 142 aaKnown RBP6.38□□□□□ -1.39
SHQ1-205ENST00000468371 ZBTB39O15060 712 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 GRM6O15303 877 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 CALUO43852 315 aaPredicted RBP6.38□□□□□ -1.39
SHQ1-205ENST00000468371 TOM1L1O75674 476 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 ATG7O95352 703 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 CXCL10P02778 98 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 SCP2P22307 547 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 EPHB3P54753 998 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 POLR2FP61218 127 aaKnown RBP6.38□□□□□ -1.39
SHQ1-205ENST00000468371 LLGL1Q15334 1064 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 MGAT5BQ3V5L5 792 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 ZNF658Q5TYW1 1059 aaPredicted RBP6.38□□□□□ -1.39
SHQ1-205ENST00000468371 CACNA2D3Q8IZS8 1091 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 COLGALT1Q8NBJ5 622 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 PCYT2Q99447 389 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 SEPT5Q99719 369 aaPredicted RBP6.38□□□□□ -1.39
SHQ1-205ENST00000468371 EHD2Q9NZN4 543 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 SEL1LQ9UBV2 794 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 RWDD2AQ9UIY3 292 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 RAB23Q9ULC3 237 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 ODF2LQ9ULJ1 636 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 MAGED2Q9UNF1 606 aaPredicted RBP6.38□□□□□ -1.39
SHQ1-205ENST00000468371 PLAGL2Q9UPG8 496 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 IPPQ9Y573 584 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 LCHNA4D1U4 455 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 H3BNC9 293 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 DHX15O43143 795 aaKnown RBP6.38□□□□□ -1.39
SHQ1-205ENST00000468371 SPATA31D3P0C874 917 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 NR1D1P20393 614 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 NPTX2P47972 431 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 IRAK1P51617 712 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 PSMD2Q13200 908 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 TUSC3Q13454 348 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 TMEM132DQ14C87 1099 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 PSMD5Q16401 504 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 SFMBT2Q5VUG0 894 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 MPZL3Q6UWV2 235 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 SPATA31D4Q6ZUB0 917 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 DCP1BQ8IZD4 617 aaKnown RBP6.38□□□□□ -1.39
SHQ1-205ENST00000468371 TTPALQ9BTX7 342 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 CUEDC2Q9H467 287 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 CDHR5Q9HBB8 845 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.38□□□□□ -1.394e-8■■■■■ 191
SHQ1-205ENST00000468371 TBC1D13Q9NVG8 400 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 HPCAL4Q9UM19 191 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 PACSIN2Q9UNF0 486 aaPredicted RBP6.38□□□□□ -1.39
SHQ1-205ENST00000468371 MYH7P12883 1935 aa6.38□□□□□ -1.39
SHQ1-205ENST00000468371 ATP8B3O60423 1300 aa6.37□□□□□ -1.39
SHQ1-205ENST00000468371 MYO1FO00160 1098 aa6.37□□□□□ -1.39
SHQ1-205ENST00000468371 KRT14P02533 472 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms