RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 DPH6Q7L8W6 267 aa15.82■□□□□ 0.12
DDX56-208ENST00000467318 KIF18AQ8NI77 898 aa15.82■□□□□ 0.12
DDX56-208ENST00000467318 SUSD3Q96L08 255 aa15.82■□□□□ 0.12
DDX56-208ENST00000467318 PI4K2AQ9BTU6 479 aa15.82■□□□□ 0.12
DDX56-208ENST00000467318 INTS2Q9H0H0 1204 aaKnown RBP15.82■□□□□ 0.12
DDX56-208ENST00000467318 PLCB1Q9NQ66 1216 aa15.82■□□□□ 0.12
DDX56-208ENST00000467318 SNX9Q9Y5X1 595 aa15.82■□□□□ 0.12
DDX56-208ENST00000467318 SCN1AP35498 2009 aa15.82■□□□□ 0.12
DDX56-208ENST00000467318 TRIOBPQ9H2D6 2365 aa15.81■□□□□ 0.12
DDX56-208ENST00000467318 CDH23Q9H251 3354 aa15.81■□□□□ 0.12
DDX56-208ENST00000467318 M0QZQ0 153 aa15.81■□□□□ 0.12
DDX56-208ENST00000467318 SPTLC1O15269 473 aa15.81■□□□□ 0.12
DDX56-208ENST00000467318 ITGB1P05556 798 aa15.81■□□□□ 0.12
DDX56-208ENST00000467318 FAM163BP0C2L3 166 aa15.81■□□□□ 0.12
DDX56-208ENST00000467318 IGFBP6P24592 240 aaPredicted RBP15.81■□□□□ 0.12
DDX56-208ENST00000467318 DNAJB2P25686 324 aa15.81■□□□□ 0.12
DDX56-208ENST00000467318 ERVK-21P61565 698 aa15.81■□□□□ 0.12
DDX56-208ENST00000467318 TNNC1P63316 161 aa15.81■□□□□ 0.12
DDX56-208ENST00000467318 PLCB3Q01970 1234 aa15.81■□□□□ 0.12
DDX56-208ENST00000467318 TAP1Q03518 808 aa15.81■□□□□ 0.12
DDX56-208ENST00000467318 TIGD5Q53EQ6 642 aa15.81■□□□□ 0.12
DDX56-208ENST00000467318 DSTYKQ6XUX3 929 aa15.81■□□□□ 0.12
DDX56-208ENST00000467318 HASPINQ8TF76 798 aa15.81■□□□□ 0.12
DDX56-208ENST00000467318 FAM124BQ9H5Z6 455 aaPredicted RBP15.81■□□□□ 0.12
DDX56-208ENST00000467318 NXF1Q9UBU9 619 aaKnown RBP15.81■□□□□ 0.12
DDX56-208ENST00000467318 APEX2Q9UBZ4 518 aa15.81■□□□□ 0.12
DDX56-208ENST00000467318 SIK3Q9Y2K2 1263 aa15.81■□□□□ 0.12
DDX56-208ENST00000467318 DAAM1Q9Y4D1 1078 aa15.81■□□□□ 0.12
DDX56-208ENST00000467318 F8W810 466 aa15.8■□□□□ 0.12
DDX56-208ENST00000467318 HUS1O60921 280 aa15.8■□□□□ 0.12
DDX56-208ENST00000467318 LRRN2O75325 713 aa15.8■□□□□ 0.12
DDX56-208ENST00000467318 RFX1P22670 979 aa15.8■□□□□ 0.12
DDX56-208ENST00000467318 TBXAS1P24557 533 aaPredicted RBP15.8■□□□□ 0.12
DDX56-208ENST00000467318 CTNNB1P35222 781 aa15.8■□□□□ 0.12
DDX56-208ENST00000467318 GCNT1Q02742 428 aa15.8■□□□□ 0.12
DDX56-208ENST00000467318 ARID5BQ14865 1188 aa15.8■□□□□ 0.12
DDX56-208ENST00000467318 PPP2R2DQ66LE6 453 aa15.8■□□□□ 0.12
DDX56-208ENST00000467318 FUT10Q6P4F1 479 aa15.8■□□□□ 0.12
DDX56-208ENST00000467318 TMEM173Q86WV6 379 aaPredicted RBP15.8■□□□□ 0.12
DDX56-208ENST00000467318 TOP6BLQ8N6T0 577 aa15.8■□□□□ 0.12
DDX56-208ENST00000467318 ANKRD7Q92527 254 aa15.8■□□□□ 0.12
DDX56-208ENST00000467318 SENP8Q96LD8 212 aa15.8■□□□□ 0.12
DDX56-208ENST00000467318 C11orf84Q9BUA3 381 aaPredicted RBP15.8■□□□□ 0.12
DDX56-208ENST00000467318 NIF3L1Q9GZT8 377 aa15.8■□□□□ 0.12
DDX56-208ENST00000467318 APOBEC3GQ9HC16 384 aaKnown RBP15.8■□□□□ 0.12
DDX56-208ENST00000467318 DSEQ9UL01 958 aa15.8■□□□□ 0.12
DDX56-208ENST00000467318 CYB561D2O14569 222 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 SYN3O14994 580 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 FGF18O76093 207 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 EFEMP2O95967 443 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 ODC1P11926 461 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 BRCC3P46736 316 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 SMYD5Q6GMV2 418 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 SPOPLQ6IQ16 392 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 ENOSF1Q7L5Y1 443 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 DDX53Q86TM3 631 aaKnown RBP15.79■□□□□ 0.12
DDX56-208ENST00000467318 VSTM4Q8IW00 320 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 PPM1KQ8N3J5 372 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 KLHL23Q8NBE8 558 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 APPL2Q8NEU8 664 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 SPATA18Q8TC71 538 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 TATDN2Q93075 761 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 JAKMIP2Q96AA8 810 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 TIFAQ96CG3 184 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 PCMTD1Q96MG8 357 aaPredicted RBP15.79■□□□□ 0.12
DDX56-208ENST00000467318 MMS19Q96T76 1030 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 C17orf80Q9BSJ5 609 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 GPR62Q9BZJ7 368 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 NKX2-4Q9H2Z4 354 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 CYP3A43Q9HB55 503 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 PUF60Q9UHX1 559 aaKnown RBP15.79■□□□□ 0.12
DDX56-208ENST00000467318 FBXL5Q9UKA1 691 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 LZTS1Q9Y250 596 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 CHD9Q3L8U1 2897 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 CHD7Q9P2D1 2997 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 PBX1P40424 430 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 UBE3AQ05086 875 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 USP41Q3LFD5 358 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 KLHDC7AQ5VTJ3 777 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 FAM171A1Q5VUB5 890 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 PHLDB3Q6NSJ2 640 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 LIMS2Q7Z4I7 341 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 RNF168Q8IYW5 571 aaPredicted RBP15.79■□□□□ 0.12
DDX56-208ENST00000467318 TMEM86AQ8N2M4 240 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 PDCL2Q8N4E4 241 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 TTC39CQ8N584 583 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 IQCDQ96DY2 449 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 NUP58Q9BVL2 599 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 BCO2Q9BYV7 579 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.79■□□□□ 0.123e-10■■■■■ 130.4
DDX56-208ENST00000467318 PCDHB8Q9UN66 801 aa15.79■□□□□ 0.12
DDX56-208ENST00000467318 TACC1O75410 805 aa15.78■□□□□ 0.12
DDX56-208ENST00000467318 SOD2P04179 222 aa15.78■□□□□ 0.12
DDX56-208ENST00000467318 CYP11A1P05108 521 aa15.78■□□□□ 0.12
DDX56-208ENST00000467318 UCHL3P15374 230 aa15.78■□□□□ 0.12
DDX56-208ENST00000467318 TYMPP19971 482 aa15.78■□□□□ 0.12
DDX56-208ENST00000467318 ASPAP45381 313 aa15.78■□□□□ 0.12
DDX56-208ENST00000467318 CUL2Q13617 745 aa15.78■□□□□ 0.12
DDX56-208ENST00000467318 SOWAHAQ2M3V2 549 aa15.78■□□□□ 0.12
DDX56-208ENST00000467318 DPY19L2P1Q6NXN4 242 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms