RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 KRT5P13647 590 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 PAX3P23760 479 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 KRT9P35527 623 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 ASPAP45381 313 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 FXR1P51114 621 aaKnown RBP eCLIP11.5□□□□□ -0.57
NUP188-204ENST00000467044 ADKP55263 362 aaKnown RBP11.5□□□□□ -0.57
NUP188-204ENST00000467044 YWHAEP62258 255 aaKnown RBP11.5□□□□□ -0.57
NUP188-204ENST00000467044 TBX2Q13207 712 aaPredicted RBP11.5□□□□□ -0.57
NUP188-204ENST00000467044 FUT10Q6P4F1 479 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 CHRDL2Q6WN34 429 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 METTL23Q86XA0 190 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 CEP57Q86XR8 500 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 GPIHBP1Q8IV16 184 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 OR6B3Q8NGW1 331 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 SP7Q8TDD2 431 aaPredicted RBP11.5□□□□□ -0.57
NUP188-204ENST00000467044 TMEM169Q96HH4 297 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 FAXDC2Q96IV6 333 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 SUSD3Q96L08 255 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 MRPL45Q9BRJ2 306 aaKnown RBP11.5□□□□□ -0.57
NUP188-204ENST00000467044 NAA15Q9BXJ9 866 aaKnown RBP11.5□□□□□ -0.57
NUP188-204ENST00000467044 BCO2Q9BYV7 579 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 TTYH3Q9C0H2 523 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 SDCBP2Q9H190 292 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 SNX25Q9H3E2 840 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 CYP3A43Q9HB55 503 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 CISHQ9NSE2 258 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 MARCH5Q9NX47 278 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 SPG21Q9NZD8 308 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 IMPACTQ9P2X3 320 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 FBXL5Q9UKA1 691 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 L1RE1Q9UN81 338 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 DAAM1Q9Y4D1 1078 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 TIMM13Q9Y5L4 95 aaPredicted RBP11.5□□□□□ -0.57
NUP188-204ENST00000467044 GBF1Q92538 1859 aa11.5□□□□□ -0.57
NUP188-204ENST00000467044 PDE4DIPQ5VU43 2346 aa11.49□□□□□ -0.57
NUP188-204ENST00000467044 KIAA1671Q9BY89 1806 aa11.49□□□□□ -0.57
NUP188-204ENST00000467044 CARNS1A5YM72 827 aa11.49□□□□□ -0.57
NUP188-204ENST00000467044 LRRC53A6NM62 1247 aa11.49□□□□□ -0.57
NUP188-204ENST00000467044 FOXN3O00409 490 aaPredicted RBP11.49□□□□□ -0.57
NUP188-204ENST00000467044 GFPT2O94808 682 aa11.49□□□□□ -0.57
NUP188-204ENST00000467044 PNMA6AP0CW24 399 aaPredicted RBP11.49□□□□□ -0.57
NUP188-204ENST00000467044 STAT1P42224 750 aa11.49□□□□□ -0.57
NUP188-204ENST00000467044 AARSP49588 968 aaKnown RBP eCLIP11.49□□□□□ -0.57
NUP188-204ENST00000467044 ZBED6P86452 979 aa11.49□□□□□ -0.57
NUP188-204ENST00000467044 ARID5AQ03989 594 aa11.49□□□□□ -0.57
NUP188-204ENST00000467044 CCDC173Q0VFZ6 552 aa11.49□□□□□ -0.57
NUP188-204ENST00000467044 ELAVL2Q12926 359 aaKnown RBP11.49□□□□□ -0.57
NUP188-204ENST00000467044 SOWAHAQ2M3V2 549 aa11.49□□□□□ -0.57
NUP188-204ENST00000467044 TSR1Q2NL82 804 aaKnown RBP11.49□□□□□ -0.57
NUP188-204ENST00000467044 ZNF394Q53GI3 561 aa11.49□□□□□ -0.57
NUP188-204ENST00000467044 FAM171A1Q5VUB5 890 aa11.49□□□□□ -0.57
NUP188-204ENST00000467044 WSCD1Q658N2 575 aa11.49□□□□□ -0.57
NUP188-204ENST00000467044 PDXDC1Q6P996 788 aa11.49□□□□□ -0.57
NUP188-204ENST00000467044 DPH6Q7L8W6 267 aa11.49□□□□□ -0.57
NUP188-204ENST00000467044 TMEM173Q86WV6 379 aaPredicted RBP11.49□□□□□ -0.57
NUP188-204ENST00000467044 ADGRF2Q8IZF7 708 aa11.49□□□□□ -0.57
NUP188-204ENST00000467044 TDHQ8IZJ6 230 aa11.49□□□□□ -0.57
NUP188-204ENST00000467044 SLC39A11Q8N1S5 342 aa11.49□□□□□ -0.57
NUP188-204ENST00000467044 TOP6BLQ8N6T0 577 aa11.49□□□□□ -0.57
NUP188-204ENST00000467044 BCL7CQ8WUZ0 217 aaPredicted RBP11.49□□□□□ -0.57
NUP188-204ENST00000467044 BAP1Q92560 729 aa11.49□□□□□ -0.57
NUP188-204ENST00000467044 IGSF21Q96ID5 467 aa11.49□□□□□ -0.57
NUP188-204ENST00000467044 GPR62Q9BZJ7 368 aa11.49□□□□□ -0.57
NUP188-204ENST00000467044 MSRAQ9UJ68 235 aa11.49□□□□□ -0.57
NUP188-204ENST00000467044 PCDHB8Q9UN66 801 aa11.49□□□□□ -0.57
NUP188-204ENST00000467044 PCDHA11Q9Y5I1 949 aa11.49□□□□□ -0.57
NUP188-204ENST00000467044 LINC01553A4QN01 128 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 F8VZ95 297 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 M0QZQ0 153 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 MFAP3LO75121 409 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 CA3P07451 260 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 PDGFRBP09619 1106 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 TKTP29401 623 aaKnown RBP11.48□□□□□ -0.57
NUP188-204ENST00000467044 CTNNB1P35222 781 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 SOX5P35711 763 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 PPM1AP35813 382 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 GNL1P36915 607 aaPredicted RBP11.48□□□□□ -0.57
NUP188-204ENST00000467044 PBX2P40425 430 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 NDST1P52848 882 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 JAM2P57087 298 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 KRT17Q04695 432 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 ASIC2Q16515 512 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 SFMBT2Q5VUG0 894 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 TMEM270Q6UE05 265 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 CCDC186Q7Z3E2 898 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 CNGA4Q8IV77 575 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 TMEM86AQ8N2M4 240 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 PDCL2Q8N4E4 241 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 TTC39CQ8N584 583 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 OR8K1Q8NGG5 319 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 SHC3Q92529 594 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 CLP1Q92989 425 aaKnown RBP11.48□□□□□ -0.57
NUP188-204ENST00000467044 JAKMIP2Q96AA8 810 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 GPR88Q9GZN0 384 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 NUCKS1Q9H1E3 243 aaKnown RBP11.48□□□□□ -0.57
NUP188-204ENST00000467044 ZNHIT6Q9NWK9 470 aaKnown RBP11.48□□□□□ -0.57
NUP188-204ENST00000467044 DSEQ9UL01 958 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 MTUS1Q9ULD2 1270 aa11.48□□□□□ -0.57
NUP188-204ENST00000467044 BARX2Q9UMQ3 279 aaPredicted RBP11.48□□□□□ -0.57
NUP188-204ENST00000467044 SF3B1O75533 1304 aaKnown RBP eCLIP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms