RNA–Protein interactions for RNA: ENST00000465655.2

RPL39P28-201, Transcript of ribosomal protein L39 pseudogene 28, humanhuman

BASIC

Gene RPL39P28, Length 155 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P28-201ENST00000465655 TMEM164Q5U3C3 297 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 STRIP1Q5VSL9 837 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 EEF1A1P5Q5VTE0 462 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 PRPF38BQ5VTL8 546 aaKnown RBP0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 IL23RQ5VWK5 629 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 DAB2IPQ5VWQ8 1189 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 SHEQ5VZ18 495 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 NAA35Q5VZE5 725 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 ALS2CLQ60I27 953 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 TBC1D9BQ66K14 1250 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 PDPK2PQ6A1A2 396 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 FCRLBQ6BAA4 426 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 SPOPLQ6IQ16 392 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 ANO7Q6IWH7 933 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 PYHIN1Q6K0P9 492 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 LIN54Q6MZP7 749 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 HMBOX1Q6NT76 420 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 ARMC6Q6NXE6 501 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 DUS1LQ6P1R4 473 aaKnown RBP0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 XRRA1Q6P2D8 792 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 PLBD1Q6P4A8 553 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 GGT6Q6P531 493 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 PGM2L1Q6PCE3 622 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 TTC23LQ6PF05 361 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 C11orf88Q6PI97 169 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 FOXR2Q6PJQ5 311 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 LARP1Q6PKG0 1096 aaKnown RBP0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 POTEBQ6S5H4 581 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 HHIPL2Q6UWX4 724 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 XKR5Q6UX68 686 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 KDM7AQ6ZMT4 941 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 TRIM72Q6ZMU5 477 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 SPOCD1Q6ZMY3 1216 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 MACC1Q6ZN28 852 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 BNC2Q6ZN30 1099 aaPredicted RBP0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 RNF207Q6ZRF8 634 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 C1orf122Q6ZSJ8 110 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 BEND4Q6ZU67 534 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 SPATA31D4Q6ZUB0 917 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 TMTC3Q6ZXV5 915 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 UNC13DQ70J99 1090 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 MARK2Q7KZI7 788 aaKnown RBP0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 RHOUQ7L0Q8 258 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 MIGA2Q7L4E1 593 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 EPM2AIP1Q7L775 607 aaPredicted RBP0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 DHX32Q7L7V1 743 aaKnown RBP0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 TAS2R42Q7RTR8 314 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 OTOP3Q7RTS5 596 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 MAMDC2Q7Z304 686 aaPredicted RBP0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 NUP54Q7Z3B4 507 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 KRT25Q7Z3Z0 450 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 KCTD20Q7Z5Y7 419 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 ZSCAN2Q7Z7L9 614 aaPredicted RBP0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 RALYLQ86SE5 291 aaKnown RBP0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 SETD3Q86TU7 594 aaPredicted RBP0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 CTAGE6Q86UF2 777 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 COMTD1Q86VU5 262 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 TSPYL5Q86VY4 417 aaPredicted RBP0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 FAM228AQ86W67 206 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 CHD1LQ86WJ1 897 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 HEATR4Q86WZ0 1026 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 RALGPS2Q86X27 583 aaPredicted RBP0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 TREML1Q86YW5 311 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 RNF135Q8IUD6 432 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 NOSTRINQ8IVI9 506 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 CCDC28AQ8IWP9 274 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 BBS7Q8IWZ6 715 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 SCUBE3Q8IX30 993 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 CTAGE4Q8IX94 777 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 CDH26Q8IXH8 852 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 PHC2Q8IXK0 858 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 FAM178BQ8IXR5 827 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 IFT20Q8IY31 132 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 SRRM1Q8IYB3 904 aaKnown RBP0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 REM2Q8IYK8 340 aaPredicted RBP0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 NRSN1Q8IZ57 195 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 ELMOD2Q8IZ81 293 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 RTKN2Q8IZC4 609 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 CACNA2D3Q8IZS8 1091 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 LSMEM2Q8N112 164 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 NUP93Q8N1F7 819 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 CLEC4FQ8N1N0 589 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 ELMOD1Q8N336 334 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 SLC43A2Q8N370 569 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 RIBC1Q8N443 379 aaPredicted RBP0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 CPA6Q8N4T0 437 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 MYCT1Q8N699 235 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 ALLCQ8N6M5 410 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 MAGEB6Q8N7X4 407 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 ANKS4BQ8N8V4 417 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 TTC29Q8NA56 475 aaPredicted RBP0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 C12orf50Q8NA57 414 aaPredicted RBP0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 MARCH10Q8NA82 808 aaPredicted RBP0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 ZSCAN1Q8NBB4 408 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 AVL9Q8NBF6 648 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 MINDY2Q8NBR6 621 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 ATAD1Q8NBU5 361 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 NOA1Q8NC60 698 aaKnown RBP0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 MTMR14Q8NCE2 650 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 ZBTB44Q8NCP5 570 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms