RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 SYCE2Q6PIF2 218 aa13.33□□□□□ -0.28
CHPF2-202ENST00000465601 INTS8Q75QN2 995 aaKnown RBP13.33□□□□□ -0.28
CHPF2-202ENST00000465601 ZC3H3Q8IXZ2 948 aaKnown RBP13.33□□□□□ -0.28
CHPF2-202ENST00000465601 LRRC52Q8N7C0 313 aa13.33□□□□□ -0.28
CHPF2-202ENST00000465601 HPDLQ96IR7 371 aa13.33□□□□□ -0.28
CHPF2-202ENST00000465601 ASB2Q96Q27 587 aa13.33□□□□□ -0.28
CHPF2-202ENST00000465601 MKNK1Q9BUB5 465 aa13.33□□□□□ -0.28
CHPF2-202ENST00000465601 FBXL5Q9UKA1 691 aa13.33□□□□□ -0.28
CHPF2-202ENST00000465601 BICDL2A1A5D9 508 aa13.32□□□□□ -0.28
CHPF2-202ENST00000465601 ARHGEF37A1IGU5 675 aa13.32□□□□□ -0.28
CHPF2-202ENST00000465601 IKBKBO14920 756 aa13.32□□□□□ -0.28
CHPF2-202ENST00000465601 OAZ2O95190 189 aa13.32□□□□□ -0.28
CHPF2-202ENST00000465601 AP3M2P53677 418 aa13.32□□□□□ -0.28
CHPF2-202ENST00000465601 NLRP12P59046 1061 aa13.32□□□□□ -0.28
CHPF2-202ENST00000465601 MYL6P60660 151 aa13.32□□□□□ -0.28
CHPF2-202ENST00000465601 MYO1EQ12965 1108 aa13.32□□□□□ -0.28
CHPF2-202ENST00000465601 RAB33AQ14088 237 aa13.32□□□□□ -0.28
CHPF2-202ENST00000465601 TDRD10Q5VZ19 366 aaKnown RBP13.32□□□□□ -0.28
CHPF2-202ENST00000465601 OVOS1Q6IE37 1185 aa13.32□□□□□ -0.28
CHPF2-202ENST00000465601 PTCRAQ6ISU1 281 aaPredicted RBP13.32□□□□□ -0.28
CHPF2-202ENST00000465601 ZNF280DQ6N043 979 aa13.32□□□□□ -0.28
CHPF2-202ENST00000465601 SV2AQ7L0J3 742 aa13.32□□□□□ -0.28
CHPF2-202ENST00000465601 METTL23Q86XA0 190 aa13.32□□□□□ -0.28
CHPF2-202ENST00000465601 MLKLQ8NB16 471 aa13.32□□□□□ -0.28
CHPF2-202ENST00000465601 KREMEN2Q8NCW0 462 aa13.32□□□□□ -0.28
CHPF2-202ENST00000465601 S1PR5Q9H228 398 aa13.32□□□□□ -0.28
CHPF2-202ENST00000465601 MMRN2Q9H8L6 949 aa13.32□□□□□ -0.28
CHPF2-202ENST00000465601 MAN1C1Q9NR34 630 aa13.32□□□□□ -0.28
CHPF2-202ENST00000465601 SNX9Q9Y5X1 595 aa13.32□□□□□ -0.28
CHPF2-202ENST00000465601 MYO10Q9HD67 2058 aa13.32□□□□□ -0.28
CHPF2-202ENST00000465601 VCANP13611 3396 aa13.31□□□□□ -0.28
CHPF2-202ENST00000465601 GRXCR2A6NFK2 248 aa13.31□□□□□ -0.28
CHPF2-202ENST00000465601 SPDYE4A6NLX3 237 aa13.31□□□□□ -0.28
CHPF2-202ENST00000465601 SLC16A3O15427 465 aaKnown RBP13.31□□□□□ -0.28
CHPF2-202ENST00000465601 HUS1O60921 280 aa13.31□□□□□ -0.28
CHPF2-202ENST00000465601 VNN1O95497 513 aa13.31□□□□□ -0.28
CHPF2-202ENST00000465601 CYP11A1P05108 521 aa13.31□□□□□ -0.28
CHPF2-202ENST00000465601 HOXB8P17481 243 aaPredicted RBP13.31□□□□□ -0.28
CHPF2-202ENST00000465601 GCLMP48507 274 aa13.31□□□□□ -0.28
CHPF2-202ENST00000465601 ROR1Q01973 937 aa13.31□□□□□ -0.28
CHPF2-202ENST00000465601 PPP3CAQ08209 521 aa13.31□□□□□ -0.28
CHPF2-202ENST00000465601 DPCR1Q3MIW9 517 aa13.31□□□□□ -0.28
CHPF2-202ENST00000465601 ZACNQ401N2 412 aa13.31□□□□□ -0.28
CHPF2-202ENST00000465601 RARS2Q5T160 578 aaKnown RBP13.31□□□□□ -0.28
CHPF2-202ENST00000465601 SLC8B1Q6J4K2 584 aa13.31□□□□□ -0.28
CHPF2-202ENST00000465601 TMC5Q6UXY8 1006 aa13.31□□□□□ -0.28
CHPF2-202ENST00000465601 FILIP1Q7Z7B0 1213 aa13.31□□□□□ -0.28
CHPF2-202ENST00000465601 FEZF2Q8TBJ5 459 aa13.31□□□□□ -0.28
CHPF2-202ENST00000465601 ELMO3Q96BJ8 720 aa13.31□□□□□ -0.28
CHPF2-202ENST00000465601 CEP63Q96MT8 703 aa13.31□□□□□ -0.28
CHPF2-202ENST00000465601 SRRTQ9BXP5 876 aaKnown RBP13.31□□□□□ -0.28
CHPF2-202ENST00000465601 DZANK1Q9NVP4 752 aa13.31□□□□□ -0.28
CHPF2-202ENST00000465601 GDAP2Q9NXN4 497 aa13.31□□□□□ -0.28
CHPF2-202ENST00000465601 DSEQ9UL01 958 aa13.31□□□□□ -0.28
CHPF2-202ENST00000465601 L1RE1Q9UN81 338 aa13.31□□□□□ -0.28
CHPF2-202ENST00000465601 TSC2P49815 1807 aa13.31□□□□□ -0.28
CHPF2-202ENST00000465601 BDP1A6H8Y1 2624 aa13.31□□□□□ -0.28
CHPF2-202ENST00000465601 C2orf16Q68DN1 1984 aa13.31□□□□□ -0.28
CHPF2-202ENST00000465601 WDR27A2RRH5 827 aa13.3□□□□□ -0.28
CHPF2-202ENST00000465601 OR6C75A6NL08 312 aa13.3□□□□□ -0.28
CHPF2-202ENST00000465601 MBTPS2O43462 519 aa13.3□□□□□ -0.28
CHPF2-202ENST00000465601 C1RP00736 705 aa13.3□□□□□ -0.28
CHPF2-202ENST00000465601 WEE2P0C1S8 567 aa13.3□□□□□ -0.28
CHPF2-202ENST00000465601 OR4Q2P0C623 313 aa13.3□□□□□ -0.28
CHPF2-202ENST00000465601 BMP1P13497 986 aa13.3□□□□□ -0.28
CHPF2-202ENST00000465601 MCCD1P59942 119 aaPredicted RBP13.3□□□□□ -0.28
CHPF2-202ENST00000465601 ENPEPQ07075 957 aa13.3□□□□□ -0.28
CHPF2-202ENST00000465601 SMAD4Q13485 552 aaKnown RBP13.3□□□□□ -0.28
CHPF2-202ENST00000465601 NCOA4Q13772 614 aa13.3□□□□□ -0.28
CHPF2-202ENST00000465601 CCDC40Q4G0X9 1142 aa13.3□□□□□ -0.28
CHPF2-202ENST00000465601 CCDC183Q5T5S1 534 aa13.3□□□□□ -0.28
CHPF2-202ENST00000465601 FOXR2Q6PJQ5 311 aa13.3□□□□□ -0.28
CHPF2-202ENST00000465601 RBM43Q6ZSC3 357 aaKnown RBP13.3□□□□□ -0.28
CHPF2-202ENST00000465601 PDCL2Q8N4E4 241 aa13.3□□□□□ -0.28
CHPF2-202ENST00000465601 SMRP1Q8NCR6 262 aa13.3□□□□□ -0.28
CHPF2-202ENST00000465601 ZNF461Q8TAF7 563 aa13.3□□□□□ -0.28
CHPF2-202ENST00000465601 MED15Q96RN5 788 aa13.3□□□□□ -0.28
CHPF2-202ENST00000465601 TMEM209Q96SK2 561 aa13.3□□□□□ -0.28
CHPF2-202ENST00000465601 RTP3Q9BQQ7 232 aa13.3□□□□□ -0.28
CHPF2-202ENST00000465601 PLEKHA4Q9H4M7 779 aa13.3□□□□□ -0.28
CHPF2-202ENST00000465601 TMEM63CQ9P1W3 806 aa13.3□□□□□ -0.28
CHPF2-202ENST00000465601 ARMCX3Q9UH62 379 aaPredicted RBP13.3□□□□□ -0.28
CHPF2-202ENST00000465601 DPP7Q9UHL4 492 aa13.3□□□□□ -0.28
CHPF2-202ENST00000465601 RWDD2AQ9UIY3 292 aa13.3□□□□□ -0.28
CHPF2-202ENST00000465601 CDH22Q9UJ99 828 aa13.3□□□□□ -0.28
CHPF2-202ENST00000465601 FBXW11Q9UKB1 542 aa13.3□□□□□ -0.28
CHPF2-202ENST00000465601 CCDC195A0A1B0GUA6 201 aa13.29□□□□□ -0.28
CHPF2-202ENST00000465601 RFPL2O75678 378 aa13.29□□□□□ -0.28
CHPF2-202ENST00000465601 ABLIM3O94929 683 aa13.29□□□□□ -0.28
CHPF2-202ENST00000465601 CLSTN1O94985 981 aa13.29□□□□□ -0.28
CHPF2-202ENST00000465601 HLA-DRAP01903 254 aa13.29□□□□□ -0.28
CHPF2-202ENST00000465601 CPB1P15086 417 aa13.29□□□□□ -0.28
CHPF2-202ENST00000465601 IL9P15248 144 aa13.29□□□□□ -0.28
CHPF2-202ENST00000465601 ATICP31939 592 aa13.29□□□□□ -0.28
CHPF2-202ENST00000465601 CDR1P51861 262 aa13.29□□□□□ -0.28
CHPF2-202ENST00000465601 SOWAHAQ2M3V2 549 aa13.29□□□□□ -0.28
CHPF2-202ENST00000465601 PUS10Q3MIT2 529 aaKnown RBP13.29□□□□□ -0.28
CHPF2-202ENST00000465601 WDR72Q3MJ13 1102 aa13.29□□□□□ -0.28
CHPF2-202ENST00000465601 DCAF17Q5H9S7 520 aaPredicted RBP13.29□□□□□ -0.28
CHPF2-202ENST00000465601 TJAP1Q5JTD0 557 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms