RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 CR1LQ2VPA4 569 aa6.19□□□□□ -1.42
CD46-211ENST00000464082 USH1GQ495M9 461 aa6.19□□□□□ -1.42
CD46-211ENST00000464082 IFIT1BQ5T764 474 aaKnown RBP6.19□□□□□ -1.42
CD46-211ENST00000464082 MBLAC2Q68D91 279 aa6.19□□□□□ -1.42
CD46-211ENST00000464082 NSMFQ6X4W1 530 aa6.19□□□□□ -1.42
CD46-211ENST00000464082 UNC5AQ6ZN44 842 aa6.19□□□□□ -1.42
CD46-211ENST00000464082 RUFY4Q6ZNE9 571 aa6.19□□□□□ -1.42
CD46-211ENST00000464082 DCP2Q8IU60 420 aaKnown RBP6.19□□□□□ -1.42
CD46-211ENST00000464082 TAB3Q8N5C8 712 aaPredicted RBP6.19□□□□□ -1.42
CD46-211ENST00000464082 SLC43A3Q8NBI5 491 aa6.19□□□□□ -1.42
CD46-211ENST00000464082 TRIM43Q96BQ3 446 aaPredicted RBP6.19□□□□□ -1.42
CD46-211ENST00000464082 ZSWIM3Q96MP5 696 aa6.19□□□□□ -1.42
CD46-211ENST00000464082 TMEM168Q9H0V1 697 aa6.19□□□□□ -1.42
CD46-211ENST00000464082 SEMA4AQ9H3S1 761 aa6.19□□□□□ -1.42
CD46-211ENST00000464082 RIOX1Q9H6W3 641 aa6.19□□□□□ -1.42
CD46-211ENST00000464082 KAT14Q9H8E8 782 aa6.19□□□□□ -1.42
CD46-211ENST00000464082 LY9Q9HBG7 655 aa6.19□□□□□ -1.42
CD46-211ENST00000464082 FAM184BQ9ULE4 1060 aa6.19□□□□□ -1.42
CD46-211ENST00000464082 CNPY2Q9Y2B0 182 aa6.19□□□□□ -1.42
CD46-211ENST00000464082 CTDP1Q9Y5B0 961 aaPredicted RBP6.19□□□□□ -1.42
CD46-211ENST00000464082 CHD7Q9P2D1 2997 aa6.19□□□□□ -1.42
CD46-211ENST00000464082 CHD9Q3L8U1 2897 aa6.19□□□□□ -1.42
CD46-211ENST00000464082 PRUNE2Q8WUY3 3088 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 REV3LO60673 3130 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 LOC102724159A0A0B4J2E5 919 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 NPHP3-ACAD11A0A0J9YXS1 232 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 ASB14A6NK59 587 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 SH2B2O14492 632 aaPredicted RBP6.18□□□□□ -1.42
CD46-211ENST00000464082 ARIH2O95376 493 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 ASGR1P07306 291 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 PARP1P09874 1014 aaKnown RBP6.18□□□□□ -1.42
CD46-211ENST00000464082 C6orf222P0C671 652 aaPredicted RBP6.18□□□□□ -1.42
CD46-211ENST00000464082 PAMP19021 973 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 BEX3Q00994 111 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 TNFAIP2Q03169 654 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 TLE2Q04725 743 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 FOXE3Q13461 319 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 TCEAL1Q15170 157 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 PWP2Q15269 919 aaKnown RBP6.18□□□□□ -1.42
CD46-211ENST00000464082 ADCK5Q3MIX3 580 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 CCDC178Q5BJE1 867 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 CREB3L3Q68CJ9 461 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 RNF207Q6ZRF8 634 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 EEPD1Q7L9B9 569 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 ANKRD33Q7Z3H0 272 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 RNF180Q86T96 592 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 TLK2Q86UE8 772 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 NCOA7Q8NI08 942 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 TAAR1Q96RJ0 339 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 UBAC1Q9BSL1 405 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 NT5C1AQ9BXI3 368 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 AP5M1Q9H0R1 490 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 IKZF4Q9H2S9 585 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 L2HGDHQ9H9P8 463 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 VTA1Q9NP79 307 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 MARCH2Q9P0N8 246 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 GGT7Q9UJ14 662 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 TBX21Q9UL17 535 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 ATP11BQ9Y2G3 1177 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 BACE2Q9Y5Z0 518 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 ABCB11O95342 1321 aa6.18□□□□□ -1.42
CD46-211ENST00000464082 PTPDC1A2A3K4 754 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 KLRF2D3W0D1 207 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 IFIT3O14879 490 aaKnown RBP6.17□□□□□ -1.42
CD46-211ENST00000464082 KIAA0355O15063 1070 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 NPHS1O60500 1241 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 CD4P01730 458 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 CALML3P27482 149 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 HSD17B4P51659 736 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 WTAPQ15007 396 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 LRIT3Q3SXY7 679 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 DUSP28Q4G0W2 176 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 C9orf50Q5SZB4 431 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 IQSEC1Q6DN90 963 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 CCDC62Q6P9F0 684 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 FAM126BQ8IXS8 530 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 TDHQ8IZJ6 230 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 IL31RAQ8NI17 732 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 COPS5Q92905 334 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 BADQ92934 168 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 PIGSQ96S52 555 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 TM9SF2Q99805 663 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 MYL10Q9BUA6 226 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 LRRC2Q9BYS8 371 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 VAT1LQ9HCJ6 419 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 STARD7Q9NQZ5 370 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 Q9Y3F1 56 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 ELP1O95163 1332 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 FRMPD4Q14CM0 1322 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 NLRC5Q86WI3 1866 aa6.17□□□□□ -1.42
CD46-211ENST00000464082 BRWD1Q9NSI6 2320 aa6.16□□□□□ -1.42
CD46-211ENST00000464082 ARVCFO00192 962 aa6.16□□□□□ -1.42
CD46-211ENST00000464082 ZBTB5O15062 677 aa6.16□□□□□ -1.42
CD46-211ENST00000464082 PRC1O43663 620 aa6.16□□□□□ -1.42
CD46-211ENST00000464082 PQBP1O60828 265 aaKnown RBP6.16□□□□□ -1.42
CD46-211ENST00000464082 PLEKHA8P1O95397 391 aa6.16□□□□□ -1.42
CD46-211ENST00000464082 CLTBP09497 229 aa6.16□□□□□ -1.42
CD46-211ENST00000464082 RXRAP19793 462 aa6.16□□□□□ -1.42
CD46-211ENST00000464082 PURAQ00577 322 aaKnown RBP6.16□□□□□ -1.42
CD46-211ENST00000464082 EXOSC10Q01780 885 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms